RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 P2RX4Q99571 388 aa4.57□□□□□ -1.68
SCLT1-207ENST00000506233 ZFP92A6NM28 416 aa4.57□□□□□ -1.68
SCLT1-207ENST00000506233 RBP4P02753 201 aa4.57□□□□□ -1.68
SCLT1-207ENST00000506233 CRYBA1P05813 215 aa4.57□□□□□ -1.68
SCLT1-207ENST00000506233 HLA-DRB5Q30154 266 aa4.57□□□□□ -1.68
SCLT1-207ENST00000506233 C2orf83Q53S99 150 aa4.57□□□□□ -1.68
SCLT1-207ENST00000506233 NPBQ8NG41 125 aa4.57□□□□□ -1.68
SCLT1-207ENST00000506233 OR51G1Q8NGK1 321 aa4.57□□□□□ -1.68
SCLT1-207ENST00000506233 ISOC2Q96AB3 205 aa4.57□□□□□ -1.68
SCLT1-207ENST00000506233 TRAV38-1A0A0B4J264 116 aa4.57□□□□□ -1.68
SCLT1-207ENST00000506233 C7orf77A4D0Y5 90 aa4.57□□□□□ -1.68
SCLT1-207ENST00000506233 PRRG2O14669 202 aa4.57□□□□□ -1.68
SCLT1-207ENST00000506233 PRB1P04280 392 aa4.57□□□□□ -1.68
SCLT1-207ENST00000506233 HSPB1P04792 205 aaKnown RBP4.57□□□□□ -1.68
SCLT1-207ENST00000506233 PET100P0DJ07 73 aa4.57□□□□□ -1.68
SCLT1-207ENST00000506233 GATA2P23769 480 aaPredicted RBP4.57□□□□□ -1.68
SCLT1-207ENST00000506233 REG1BP48304 166 aa4.57□□□□□ -1.68
SCLT1-207ENST00000506233 MRPS11P82912 194 aaKnown RBP4.57□□□□□ -1.68
SCLT1-207ENST00000506233 KLRD1Q13241 179 aa4.57□□□□□ -1.68
SCLT1-207ENST00000506233 LINC00322Q6ZN03 302 aaPredicted RBP4.57□□□□□ -1.68
SCLT1-207ENST00000506233 CMTM1Q8IZ96 169 aa4.57□□□□□ -1.68
SCLT1-207ENST00000506233 TCTEX1D2Q8WW35 142 aa4.57□□□□□ -1.68
SCLT1-207ENST00000506233 TMEM133Q9H2Q1 129 aa4.57□□□□□ -1.68
SCLT1-207ENST00000506233 SDF2L1Q9HCN8 221 aa4.57□□□□□ -1.68
SCLT1-207ENST00000506233 URB1O60287 2271 aaKnown RBP4.57□□□□□ -1.68
SCLT1-207ENST00000506233 ANKHD1Q8IWZ3 2542 aaKnown RBP4.57□□□□□ -1.68
SCLT1-207ENST00000506233 ICE1Q9Y2F5 2266 aa4.56□□□□□ -1.68
SCLT1-207ENST00000506233 IGHV1-3A0A0C4DH29 117 aa4.56□□□□□ -1.68
SCLT1-207ENST00000506233 GGTLC3B5MD39 225 aa4.56□□□□□ -1.68
SCLT1-207ENST00000506233 FNDC10F2Z333 226 aa4.56□□□□□ -1.68
SCLT1-207ENST00000506233 M0R1X1 148 aa4.56□□□□□ -1.68
SCLT1-207ENST00000506233 IGHV4-39P01824 125 aa4.56□□□□□ -1.68
SCLT1-207ENST00000506233 SPCS3P61009 180 aa4.56□□□□□ -1.68
SCLT1-207ENST00000506233 ZNF90Q03938 601 aa4.56□□□□□ -1.68
SCLT1-207ENST00000506233 SLC38A11Q08AI6 406 aa4.56□□□□□ -1.68
SCLT1-207ENST00000506233 MUC15Q8N387 334 aa4.56□□□□□ -1.68
SCLT1-207ENST00000506233 OR13D1Q8NGV5 346 aa4.56□□□□□ -1.68
SCLT1-207ENST00000506233 OR2T6Q8NHC8 308 aa4.56□□□□□ -1.68
SCLT1-207ENST00000506233 ITPR3Q14573 2671 aa4.56□□□□□ -1.68
SCLT1-207ENST00000506233 UBE2L5PA0A1B0GUS4 154 aa4.56□□□□□ -1.68
SCLT1-207ENST00000506233 OPRK1P41145 380 aa4.56□□□□□ -1.68
SCLT1-207ENST00000506233 ATP5G3P48201 142 aa4.56□□□□□ -1.68
SCLT1-207ENST00000506233 KRTAP10-9P60411 292 aa4.56□□□□□ -1.68
SCLT1-207ENST00000506233 SPANXN5Q5MJ07 72 aa4.56□□□□□ -1.68
SCLT1-207ENST00000506233 FAM120AOSQ5T036 256 aa4.56□□□□□ -1.68
SCLT1-207ENST00000506233 C9orf139Q6ZV77 190 aa4.56□□□□□ -1.68
SCLT1-207ENST00000506233 LFNGQ8NES3 379 aa4.56□□□□□ -1.68
SCLT1-207ENST00000506233 OR9G1Q8NH87 305 aa4.56□□□□□ -1.68
SCLT1-207ENST00000506233 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.56□□□□□ -1.68
SCLT1-207ENST00000506233 APOC3P02656 99 aa4.56□□□□□ -1.68
SCLT1-207ENST00000506233 RPL31P62899 125 aaKnown RBP4.56□□□□□ -1.68
SCLT1-207ENST00000506233 CCL17Q92583 94 aa4.56□□□□□ -1.68
SCLT1-207ENST00000506233 ZNF714Q96N38 554 aa4.56□□□□□ -1.68
SCLT1-207ENST00000506233 RPH3ALQ9UNE2 315 aa4.56□□□□□ -1.68
SCLT1-207ENST00000506233 A0A087WWC5 75 aa4.55□□□□□ -1.68
SCLT1-207ENST00000506233 H3BQ15 152 aa4.55□□□□□ -1.68
SCLT1-207ENST00000506233 K7EIM0 57 aa4.55□□□□□ -1.68
SCLT1-207ENST00000506233 IFNA21P01568 189 aa4.55□□□□□ -1.68
SCLT1-207ENST00000506233 RAB5CP51148 216 aa4.55□□□□□ -1.68
SCLT1-207ENST00000506233 SERF2P84101 59 aa4.55□□□□□ -1.68
SCLT1-207ENST00000506233 KLF17Q5JT82 389 aaPredicted RBP4.55□□□□□ -1.68
SCLT1-207ENST00000506233 C1QL4Q86Z23 238 aa4.55□□□□□ -1.68
SCLT1-207ENST00000506233 OR1L8Q8NGR8 309 aa4.55□□□□□ -1.68
SCLT1-207ENST00000506233 C11orf52Q96A22 123 aa4.55□□□□□ -1.68
SCLT1-207ENST00000506233 SLC35B3Q9H1N7 401 aa4.55□□□□□ -1.68
SCLT1-207ENST00000506233 RNF114Q9Y508 228 aa4.55□□□□□ -1.68
SCLT1-207ENST00000506233 CLPSL1A2RUU4 121 aa4.55□□□□□ -1.68
SCLT1-207ENST00000506233 APOHP02749 345 aaPredicted RBP4.55□□□□□ -1.68
SCLT1-207ENST00000506233 BCL2P10415 239 aa4.55□□□□□ -1.68
SCLT1-207ENST00000506233 EDDM3BP56851 147 aa4.55□□□□□ -1.68
SCLT1-207ENST00000506233 SSX9Q7RTT3 188 aa4.55□□□□□ -1.68
SCLT1-207ENST00000506233 SMAD5-AS1Q9Y6J3 95 aa4.55□□□□□ -1.68
SCLT1-207ENST00000506233 TGIF2-C20orf24A0A0A6YYL0 155 aa4.54□□□□□ -1.68
SCLT1-207ENST00000506233 TRAV5A0A0B4J249 113 aa4.54□□□□□ -1.68
SCLT1-207ENST00000506233 PCP4L1A6NKN8 68 aa4.54□□□□□ -1.68
SCLT1-207ENST00000506233 SNURFLB1AK76 121 aa4.54□□□□□ -1.68
SCLT1-207ENST00000506233 HMGB3O15347 200 aaKnown RBP4.54□□□□□ -1.68
SCLT1-207ENST00000506233 FSHBP01225 129 aa4.54□□□□□ -1.68
SCLT1-207ENST00000506233 RPL23P62829 140 aaKnown RBP4.54□□□□□ -1.68
SCLT1-207ENST00000506233 PSG5Q15238 335 aa4.54□□□□□ -1.68
SCLT1-207ENST00000506233 AVPI1Q5T686 147 aa4.54□□□□□ -1.68
SCLT1-207ENST00000506233 GDF5OSQ5U4N7 250 aa4.54□□□□□ -1.68
SCLT1-207ENST00000506233 MIC13Q5XKP0 118 aa4.54□□□□□ -1.68
SCLT1-207ENST00000506233 TGIF2LXQ8IUE1 241 aa4.54□□□□□ -1.68
SCLT1-207ENST00000506233 OR4C5Q8NGB2 326 aa4.54□□□□□ -1.68
SCLT1-207ENST00000506233 FAM213BQ8TBF2 198 aa4.54□□□□□ -1.68
SCLT1-207ENST00000506233 FXYD5Q96DB9 178 aa4.54□□□□□ -1.68
SCLT1-207ENST00000506233 SIGLEC9Q9Y336 463 aa4.54□□□□□ -1.68
SCLT1-207ENST00000506233 PTPRZ1P23471 2315 aaPredicted RBP4.54□□□□□ -1.68
SCLT1-207ENST00000506233 UMAD1C9J7I0 102 aa4.54□□□□□ -1.68
SCLT1-207ENST00000506233 H3BTX0 84 aa4.54□□□□□ -1.68
SCLT1-207ENST00000506233 SOX15O60248 233 aa4.54□□□□□ -1.68
SCLT1-207ENST00000506233 OR5G3P0C626 314 aa4.54□□□□□ -1.68
SCLT1-207ENST00000506233 HSPE1P61604 102 aaKnown RBP4.54□□□□□ -1.68
SCLT1-207ENST00000506233 LYG1Q8N1E2 194 aa4.54□□□□□ -1.68
SCLT1-207ENST00000506233 HSPB9Q9BQS6 159 aa4.54□□□□□ -1.68
SCLT1-207ENST00000506233 GGACTQ9BVM4 153 aa4.54□□□□□ -1.68
SCLT1-207ENST00000506233 OR51B2Q9Y5P1 312 aa4.54□□□□□ -1.68
SCLT1-207ENST00000506233 DNHD1Q96M86 4753 aa4.54□□□□□ -1.68
SCLT1-207ENST00000506233 USP9YO00507 2555 aaPredicted RBP4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms