RNA–Protein interactions for RNA: ENST00000505625.5

MATR3-211, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 7,306 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-211ENST00000505625 C1QTNF5Q9BXJ0 243 aa4.29□□□□□ -1.72
MATR3-211ENST00000505625 PARLQ9H300 379 aa4.29□□□□□ -1.72
MATR3-211ENST00000505625 JPT1Q9UK76 154 aa4.29□□□□□ -1.72
MATR3-211ENST00000505625 CADP27708 2225 aa4.29□□□□□ -1.72
MATR3-211ENST00000505625 CEP192Q8TEP8 1941 aa4.29□□□□□ -1.72
MATR3-211ENST00000505625 TRBV7-1A0A0A6YYK4 115 aa4.29□□□□□ -1.72
MATR3-211ENST00000505625 CA11O75493 328 aa4.29□□□□□ -1.72
MATR3-211ENST00000505625 IGHV1-46P01743 117 aa4.29□□□□□ -1.72
MATR3-211ENST00000505625 FER1L6-AS1Q8NA97 138 aa4.29□□□□□ -1.72
MATR3-211ENST00000505625 SPATA25Q9BR10 227 aa4.29□□□□□ -1.72
MATR3-211ENST00000505625 NAA50Q9GZZ1 169 aaKnown RBP4.29□□□□□ -1.72
MATR3-211ENST00000505625 IL24Q13007 206 aa4.28□□□□□ -1.72
MATR3-211ENST00000505625 LYPD2Q6UXB3 125 aa4.28□□□□□ -1.72
MATR3-211ENST00000505625 C9orf47Q6ZRZ4 202 aa4.28□□□□□ -1.72
MATR3-211ENST00000505625 SIGLEC9Q9Y336 463 aa4.28□□□□□ -1.72
MATR3-211ENST00000505625 TMEM131Q92545 1883 aa4.28□□□□□ -1.72
MATR3-211ENST00000505625 IGKV2-24A0A0C4DH68 120 aa4.28□□□□□ -1.72
MATR3-211ENST00000505625 A0A1W2PP11 408 aa4.28□□□□□ -1.72
MATR3-211ENST00000505625 TEX22C9J3V5 150 aa4.28□□□□□ -1.72
MATR3-211ENST00000505625 PTGDSP41222 190 aa4.28□□□□□ -1.72
MATR3-211ENST00000505625 KLF17Q5JT82 389 aaPredicted RBP4.28□□□□□ -1.72
MATR3-211ENST00000505625 FGFRL1Q8N441 504 aa4.28□□□□□ -1.72
MATR3-211ENST00000505625 IGFBPL1Q8WX77 278 aa4.28□□□□□ -1.72
MATR3-211ENST00000505625 MRM2Q9UI43 246 aaKnown RBP4.28□□□□□ -1.72
MATR3-211ENST00000505625 KLF12Q9Y4X4 402 aa4.28□□□□□ -1.72
MATR3-211ENST00000505625 KIAA2026Q5HYC2 2103 aa4.28□□□□□ -1.72
MATR3-211ENST00000505625 TRBV25-1A0A075B6N4 114 aa4.28□□□□□ -1.72
MATR3-211ENST00000505625 ZFPL1O95159 310 aa4.28□□□□□ -1.72
MATR3-211ENST00000505625 CD160O95971 181 aa4.28□□□□□ -1.72
MATR3-211ENST00000505625 A0A1B0GW64 132 aa4.28□□□□□ -1.72
MATR3-211ENST00000505625 OR9G9P0C7N8 305 aa4.28□□□□□ -1.72
MATR3-211ENST00000505625 IGFBP2P18065 325 aa4.28□□□□□ -1.72
MATR3-211ENST00000505625 EWSR1Q01844 656 aaKnown RBP eCLIP4.28□□□□□ -1.72
MATR3-211ENST00000505625 CITED1Q99966 193 aa4.28□□□□□ -1.72
MATR3-211ENST00000505625 CBY1Q9Y3M2 126 aa4.28□□□□□ -1.72
MATR3-211ENST00000505625 MPDZO75970 2070 aa4.28□□□□□ -1.72
MATR3-211ENST00000505625 HEATR5AQ86XA9 2040 aa4.28□□□□□ -1.72
MATR3-211ENST00000505625 SAA2-SAA4A0A096LPE2 208 aa4.28□□□□□ -1.72
MATR3-211ENST00000505625 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.28□□□□□ -1.72
MATR3-211ENST00000505625 E7EQL1 145 aa4.28□□□□□ -1.72
MATR3-211ENST00000505625 SAA2P0DJI9 122 aaPredicted RBP4.28□□□□□ -1.72
MATR3-211ENST00000505625 SLURP1P55000 103 aa4.28□□□□□ -1.72
MATR3-211ENST00000505625 SEM1Q6ZVN7 128 aa4.28□□□□□ -1.72
MATR3-211ENST00000505625 WDR34Q96EX3 536 aa4.28□□□□□ -1.72
MATR3-211ENST00000505625 NIT2Q9NQR4 276 aa4.28□□□□□ -1.72
MATR3-211ENST00000505625 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.27□□□□□ -1.73
MATR3-211ENST00000505625 MST1P26927 711 aa4.27□□□□□ -1.73
MATR3-211ENST00000505625 GPR146Q96CH1 333 aa4.27□□□□□ -1.73
MATR3-211ENST00000505625 SIGLEC8Q9NYZ4 499 aa4.27□□□□□ -1.73
MATR3-211ENST00000505625 UTRNP46939 3433 aa4.27□□□□□ -1.73
MATR3-211ENST00000505625 HMX2A2RU54 273 aa4.27□□□□□ -1.73
MATR3-211ENST00000505625 MPTX1A8MV57 137 aa4.27□□□□□ -1.73
MATR3-211ENST00000505625 NDUFS8O00217 210 aa4.27□□□□□ -1.73
MATR3-211ENST00000505625 IGHV4-59P01825 116 aa4.27□□□□□ -1.73
MATR3-211ENST00000505625 OR10D4PQ8NGN7 298 aa4.27□□□□□ -1.73
MATR3-211ENST00000505625 MBD3L1Q8WWY6 194 aa4.27□□□□□ -1.73
MATR3-211ENST00000505625 MEGF9Q9H1U4 602 aa4.27□□□□□ -1.73
MATR3-211ENST00000505625 VAX2Q9UIW0 290 aa4.27□□□□□ -1.73
MATR3-211ENST00000505625 COL6A6A6NMZ7 2263 aa4.27□□□□□ -1.73
MATR3-211ENST00000505625 IGHMP01871 453 aa4.27□□□□□ -1.73
MATR3-211ENST00000505625 DEFB135Q30KP9 77 aa4.27□□□□□ -1.73
MATR3-211ENST00000505625 FAM27BQ5VT28 67 aa4.27□□□□□ -1.73
MATR3-211ENST00000505625 ZNF562Q6V9R5 426 aa4.27□□□□□ -1.73
MATR3-211ENST00000505625 TET1Q8NFU7 2136 aa4.27□□□□□ -1.73
MATR3-211ENST00000505625 CRYGNQ8WXF5 182 aa4.27□□□□□ -1.73
MATR3-211ENST00000505625 C10orf35Q96D05 121 aa4.27□□□□□ -1.73
MATR3-211ENST00000505625 LINC00479Q96M42 142 aa4.27□□□□□ -1.73
MATR3-211ENST00000505625 TRAV12-1A0A0B4J245 112 aa4.27□□□□□ -1.73
MATR3-211ENST00000505625 OVOL3O00110 214 aa4.27□□□□□ -1.73
MATR3-211ENST00000505625 BCL2L11O43521 198 aa4.27□□□□□ -1.73
MATR3-211ENST00000505625 PGLYRP1O75594 196 aaPredicted RBP4.27□□□□□ -1.73
MATR3-211ENST00000505625 HSPE1P61604 102 aaKnown RBP4.27□□□□□ -1.73
MATR3-211ENST00000505625 DEFB112Q30KQ8 113 aa4.27□□□□□ -1.73
MATR3-211ENST00000505625 ORMDL2Q53FV1 153 aa4.27□□□□□ -1.73
MATR3-211ENST00000505625 OR10W1Q8NGF6 305 aa4.27□□□□□ -1.73
MATR3-211ENST00000505625 RPUSD1Q9UJJ7 312 aaKnown RBP4.27□□□□□ -1.73
MATR3-211ENST00000505625 SUPT4H1P63272 117 aaKnown RBP4.27□□□□□ -1.73
MATR3-211ENST00000505625 C8orf49Q96NF6 230 aa4.27□□□□□ -1.73
MATR3-211ENST00000505625 PTPRFP10586 1907 aa4.27□□□□□ -1.73
MATR3-211ENST00000505625 CACNA1EQ15878 2313 aa4.27□□□□□ -1.73
MATR3-211ENST00000505625 A0A087X0M5 115 aa4.27□□□□□ -1.73
MATR3-211ENST00000505625 IGHV1-69DA0A0B4J2H0 117 aa4.27□□□□□ -1.73
MATR3-211ENST00000505625 A0A1B0GX30 115 aa4.27□□□□□ -1.73
MATR3-211ENST00000505625 NPIPB13A6NJU9 1138 aa4.27□□□□□ -1.73
MATR3-211ENST00000505625 NPIPB5A8MRT5 1133 aa4.27□□□□□ -1.73
MATR3-211ENST00000505625 MMP23AO75900 390 aa4.27□□□□□ -1.73
MATR3-211ENST00000505625 IGHV1-69P01742 117 aa4.27□□□□□ -1.73
MATR3-211ENST00000505625 PMVKQ15126 192 aa4.27□□□□□ -1.73
MATR3-211ENST00000505625 ISOC2Q96AB3 205 aa4.27□□□□□ -1.73
MATR3-211ENST00000505625 KLHDC2Q9Y2U9 406 aa4.27□□□□□ -1.73
MATR3-211ENST00000505625 LINC00312Q9Y6C7 94 aa4.27□□□□□ -1.73
MATR3-211ENST00000505625 POLEQ07864 2286 aa4.27□□□□□ -1.73
MATR3-211ENST00000505625 KIAA1671Q9BY89 1806 aa4.27□□□□□ -1.73
MATR3-211ENST00000505625 A0A1W2PPV9 198 aa4.26□□□□□ -1.73
MATR3-211ENST00000505625 HOXB1P14653 301 aaPredicted RBP4.26□□□□□ -1.73
MATR3-211ENST00000505625 NEU3Q9UQ49 428 aa4.26□□□□□ -1.73
MATR3-211ENST00000505625 CDC42EP2O14613 210 aa4.26□□□□□ -1.73
MATR3-211ENST00000505625 C8orf88P0DMB2 117 aa4.26□□□□□ -1.73
MATR3-211ENST00000505625 SEC61GP60059 68 aa4.26□□□□□ -1.73
MATR3-211ENST00000505625 TMEM155Q4W5P6 130 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms