RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 FAM24AA6NFZ4 105 aa12.65□□□□□ -0.38
SYNE4-207ENST00000505054 H0YIZ8 118 aa12.65□□□□□ -0.38
SYNE4-207ENST00000505054 CHEK1O14757 476 aa12.65□□□□□ -0.38
SYNE4-207ENST00000505054 RD3LP0DJH9 198 aa12.65□□□□□ -0.38
SYNE4-207ENST00000505054 CXCL3P19876 107 aa12.65□□□□□ -0.38
SYNE4-207ENST00000505054 PVALBP20472 110 aaPredicted RBP12.65□□□□□ -0.38
SYNE4-207ENST00000505054 BCAP31P51572 246 aa12.65□□□□□ -0.38
SYNE4-207ENST00000505054 RRAS2P62070 204 aaPredicted RBP12.65□□□□□ -0.38
SYNE4-207ENST00000505054 DLK1P80370 383 aa12.65□□□□□ -0.38
SYNE4-207ENST00000505054 CYCSP99999 105 aaKnown RBP12.65□□□□□ -0.38
SYNE4-207ENST00000505054 AKR1C1Q04828 323 aa12.65□□□□□ -0.38
SYNE4-207ENST00000505054 USF2Q15853 346 aaPredicted RBP12.65□□□□□ -0.38
SYNE4-207ENST00000505054 LRRC37A5PQ49AS3 106 aa12.65□□□□□ -0.38
SYNE4-207ENST00000505054 OR10P1Q8NGE3 313 aa12.65□□□□□ -0.38
SYNE4-207ENST00000505054 TRGV9Q99603 122 aa12.65□□□□□ -0.38
SYNE4-207ENST00000505054 LYRM2Q9NU23 88 aaPredicted RBP12.65□□□□□ -0.38
SYNE4-207ENST00000505054 IGSF23A1L1A6 192 aa12.64□□□□□ -0.39
SYNE4-207ENST00000505054 IL4P05112 153 aa12.64□□□□□ -0.39
SYNE4-207ENST00000505054 CRYBB3P26998 211 aa12.64□□□□□ -0.39
SYNE4-207ENST00000505054 FCN2Q15485 313 aa12.64□□□□□ -0.39
SYNE4-207ENST00000505054 GUCA2BQ16661 112 aa12.64□□□□□ -0.39
SYNE4-207ENST00000505054 SBSPONQ8IVN8 264 aa12.64□□□□□ -0.39
SYNE4-207ENST00000505054 Q8N1Y9 231 aa12.64□□□□□ -0.39
SYNE4-207ENST00000505054 PPP1R1CQ8WVI7 109 aa12.64□□□□□ -0.39
SYNE4-207ENST00000505054 ST8SIA2Q92186 375 aa12.64□□□□□ -0.39
SYNE4-207ENST00000505054 RNF2Q99496 336 aa12.64□□□□□ -0.39
SYNE4-207ENST00000505054 LYSTQ99698 3801 aa12.64□□□□□ -0.39
SYNE4-207ENST00000505054 VSIRQ9H7M9 311 aa12.64□□□□□ -0.39
SYNE4-207ENST00000505054 OR5AC2Q9NZP5 309 aa12.64□□□□□ -0.39
SYNE4-207ENST00000505054 TRAV25A0A0B4J276 109 aa12.63□□□□□ -0.39
SYNE4-207ENST00000505054 IGHV3-66A0A0C4DH42 116 aa12.63□□□□□ -0.39
SYNE4-207ENST00000505054 LCE6AA0A183 80 aa12.63□□□□□ -0.39
SYNE4-207ENST00000505054 SMCO3A2RU48 225 aa12.63□□□□□ -0.39
SYNE4-207ENST00000505054 FNDC10F2Z333 226 aa12.63□□□□□ -0.39
SYNE4-207ENST00000505054 CST7O76096 145 aa12.63□□□□□ -0.39
SYNE4-207ENST00000505054 LYL1P12980 280 aa12.63□□□□□ -0.39
SYNE4-207ENST00000505054 OR2F1Q13607 317 aa12.63□□□□□ -0.39
SYNE4-207ENST00000505054 TMEM144Q7Z5S9 345 aa12.63□□□□□ -0.39
SYNE4-207ENST00000505054 LILRB2Q8N423 598 aa12.63□□□□□ -0.39
SYNE4-207ENST00000505054 TMEM252Q8N6L7 170 aa12.63□□□□□ -0.39
SYNE4-207ENST00000505054 OR11H7Q8NGC8 314 aa12.63□□□□□ -0.39
SYNE4-207ENST00000505054 OR51G1Q8NGK1 321 aa12.63□□□□□ -0.39
SYNE4-207ENST00000505054 METTL26Q96S19 204 aa12.63□□□□□ -0.39
SYNE4-207ENST00000505054 MED28Q9H204 178 aa12.63□□□□□ -0.39
SYNE4-207ENST00000505054 BIRC6Q9NR09 4857 aa12.63□□□□□ -0.39
SYNE4-207ENST00000505054 EPPK1P58107 5090 aaKnown RBP12.62□□□□□ -0.39
SYNE4-207ENST00000505054 NPPCP23582 126 aa12.62□□□□□ -0.39
SYNE4-207ENST00000505054 SLC38A11Q08AI6 406 aa12.62□□□□□ -0.39
SYNE4-207ENST00000505054 RBPMS2Q6ZRY4 209 aaKnown RBP12.62□□□□□ -0.39
SYNE4-207ENST00000505054 RNF125Q96EQ8 232 aa12.62□□□□□ -0.39
SYNE4-207ENST00000505054 GGACTQ9BVM4 153 aa12.62□□□□□ -0.39
SYNE4-207ENST00000505054 U3KQE9 123 aa12.62□□□□□ -0.39
SYNE4-207ENST00000505054 E5RGE8 158 aa12.61□□□□□ -0.39
SYNE4-207ENST00000505054 TSPAN4O14817 238 aa12.61□□□□□ -0.39
SYNE4-207ENST00000505054 MPC2O95563 127 aa12.61□□□□□ -0.39
SYNE4-207ENST00000505054 RLN2P04090 185 aa12.61□□□□□ -0.39
SYNE4-207ENST00000505054 FABP1P07148 127 aa12.61□□□□□ -0.39
SYNE4-207ENST00000505054 SULT1A1P50225 295 aa12.61□□□□□ -0.39
SYNE4-207ENST00000505054 FAM90A2PQ658T7 463 aa12.61□□□□□ -0.39
SYNE4-207ENST00000505054 TMEM182Q6ZP80 229 aaPredicted RBP12.61□□□□□ -0.39
SYNE4-207ENST00000505054 TMEM217Q8N7C4 229 aa12.61□□□□□ -0.39
SYNE4-207ENST00000505054 RNF126Q9BV68 326 aa12.61□□□□□ -0.39
SYNE4-207ENST00000505054 ZMAT4Q9H898 229 aa12.61□□□□□ -0.39
SYNE4-207ENST00000505054 HNRNPCP07910 306 aaKnown RBP eCLIP12.6□□□□□ -0.39
SYNE4-207ENST00000505054 CD7P09564 240 aa12.6□□□□□ -0.39
SYNE4-207ENST00000505054 FRMD6-AS1P0C7T7 363 aa12.6□□□□□ -0.39
SYNE4-207ENST00000505054 GATA2P23769 480 aaPredicted RBP12.6□□□□□ -0.39
SYNE4-207ENST00000505054 BMI1P35226 326 aa12.6□□□□□ -0.39
SYNE4-207ENST00000505054 P2RY1P47900 373 aa12.6□□□□□ -0.39
SYNE4-207ENST00000505054 CD81P60033 236 aa12.6□□□□□ -0.39
SYNE4-207ENST00000505054 LYZP61626 148 aa12.6□□□□□ -0.39
SYNE4-207ENST00000505054 LAMTOR1Q6IAA8 161 aa12.6□□□□□ -0.39
SYNE4-207ENST00000505054 TCF24Q7RTU0 167 aa12.6□□□□□ -0.39
SYNE4-207ENST00000505054 GTSCR1Q86UQ5 136 aa12.6□□□□□ -0.39
SYNE4-207ENST00000505054 STX12Q86Y82 276 aa12.6□□□□□ -0.39
SYNE4-207ENST00000505054 SPAG8Q99932 426 aaPredicted RBP12.6□□□□□ -0.39
SYNE4-207ENST00000505054 PBDC1Q9BVG4 233 aa12.6□□□□□ -0.39
SYNE4-207ENST00000505054 NPVFQ9HCQ7 196 aa12.6□□□□□ -0.39
SYNE4-207ENST00000505054 A0A1W2PS18 150 aa12.59□□□□□ -0.39
SYNE4-207ENST00000505054 DFFBO76075 338 aa12.59□□□□□ -0.39
SYNE4-207ENST00000505054 CYP2G1PQ6ZSU1 146 aa12.59□□□□□ -0.39
SYNE4-207ENST00000505054 STPG3Q8N7X2 389 aa12.59□□□□□ -0.39
SYNE4-207ENST00000505054 CITED4Q96RK1 184 aa12.59□□□□□ -0.39
SYNE4-207ENST00000505054 NEURL2Q9BR09 285 aa12.59□□□□□ -0.39
SYNE4-207ENST00000505054 TMEM231Q9H6L2 316 aa12.59□□□□□ -0.39
SYNE4-207ENST00000505054 RABAC1Q9UI14 185 aa12.59□□□□□ -0.39
SYNE4-207ENST00000505054 STARD9Q9P2P6 4700 aa12.58□□□□□ -0.4
SYNE4-207ENST00000505054 EIF2B2P49770 351 aaKnown RBP12.58□□□□□ -0.4
SYNE4-207ENST00000505054 EWSR1Q01844 656 aaKnown RBP eCLIP12.58□□□□□ -0.4
SYNE4-207ENST00000505054 VWC2Q2TAL6 325 aa12.58□□□□□ -0.4
SYNE4-207ENST00000505054 TEPPQ6URK8 271 aa12.58□□□□□ -0.4
SYNE4-207ENST00000505054 WFDC10AQ9H1F0 79 aa12.58□□□□□ -0.4
SYNE4-207ENST00000505054 C19orf73Q9NVV2 129 aa12.58□□□□□ -0.4
SYNE4-207ENST00000505054 MBD2Q9UBB5 411 aa12.58□□□□□ -0.4
SYNE4-207ENST00000505054 IGKV3-7A0A075B6H7 116 aa12.57□□□□□ -0.4
SYNE4-207ENST00000505054 PET100P0DJ07 73 aa12.57□□□□□ -0.4
SYNE4-207ENST00000505054 IGHV4-30-4P0DP06 118 aa12.57□□□□□ -0.4
SYNE4-207ENST00000505054 S100A11P31949 105 aa12.57□□□□□ -0.4
SYNE4-207ENST00000505054 HBG1P69891 147 aa12.57□□□□□ -0.4
SYNE4-207ENST00000505054 HBG2P69892 147 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms