RNA–Protein interactions for RNA: ENST00000504994.1

HERC3-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 5

Gene HERC3, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-209ENST00000504994 PDZD9Q8IXQ8 264 aa2.43□□□□□ -2.02
HERC3-209ENST00000504994 OR4E2Q8NGC2 313 aa2.43□□□□□ -2.02
HERC3-209ENST00000504994 PRADC1Q9BSG0 188 aa2.43□□□□□ -2.02
HERC3-209ENST00000504994 TIMM21Q9BVV7 248 aa2.43□□□□□ -2.02
HERC3-209ENST00000504994 RTL8AQ9BWD3 113 aa2.43□□□□□ -2.02
HERC3-209ENST00000504994 OTORQ9NRC9 128 aa2.43□□□□□ -2.02
HERC3-209ENST00000504994 TECPR2O15040 1411 aa2.42□□□□□ -2.02
HERC3-209ENST00000504994 IGKV3D-11A0A0A0MRZ8 115 aa2.42□□□□□ -2.02
HERC3-209ENST00000504994 IBA57-AS1B1ANH7 110 aa2.42□□□□□ -2.02
HERC3-209ENST00000504994 ARPC5O15511 151 aa2.42□□□□□ -2.02
HERC3-209ENST00000504994 GGCTO75223 188 aaKnown RBP2.42□□□□□ -2.02
HERC3-209ENST00000504994 CXCL1P09341 107 aa2.42□□□□□ -2.02
HERC3-209ENST00000504994 METTL15P1P0C7V9 234 aa2.42□□□□□ -2.02
HERC3-209ENST00000504994 SCGB1A1P11684 91 aa2.42□□□□□ -2.02
HERC3-209ENST00000504994 COX6A1P12074 109 aa2.42□□□□□ -2.02
HERC3-209ENST00000504994 FKBP2P26885 142 aaKnown RBP2.42□□□□□ -2.02
HERC3-209ENST00000504994 FUSP35637 526 aaKnown RBP eCLIP2.42□□□□□ -2.02
HERC3-209ENST00000504994 DYNLT3P51808 116 aa2.42□□□□□ -2.02
HERC3-209ENST00000504994 RAB4BP61018 213 aa2.42□□□□□ -2.02
HERC3-209ENST00000504994 DYNLT1P63172 113 aa2.42□□□□□ -2.02
HERC3-209ENST00000504994 RHOGP84095 191 aa2.42□□□□□ -2.02
HERC3-209ENST00000504994 MSMO1Q15800 293 aa2.42□□□□□ -2.02
HERC3-209ENST00000504994 HRCT1Q6UXD1 115 aa2.42□□□□□ -2.02
HERC3-209ENST00000504994 SOSTDC1Q6X4U4 206 aa2.42□□□□□ -2.02
HERC3-209ENST00000504994 DHFR2Q86XF0 187 aa2.42□□□□□ -2.02
HERC3-209ENST00000504994 OR8B3Q8NGG8 313 aa2.42□□□□□ -2.02
HERC3-209ENST00000504994 OR9Q1Q8NGQ5 310 aa2.42□□□□□ -2.02
HERC3-209ENST00000504994 PPTC7Q8NI37 304 aa2.42□□□□□ -2.02
HERC3-209ENST00000504994 BORCS8Q96FH0 119 aa2.42□□□□□ -2.02
HERC3-209ENST00000504994 YPEL2Q96QA6 119 aa2.42□□□□□ -2.02
HERC3-209ENST00000504994 HSPB9Q9BQS6 159 aa2.42□□□□□ -2.02
HERC3-209ENST00000504994 C6orf62Q9GZU0 229 aaPredicted RBP2.42□□□□□ -2.02
HERC3-209ENST00000504994 LAMTOR3Q9UHA4 124 aa2.42□□□□□ -2.02
HERC3-209ENST00000504994 RNF11Q9Y3C5 154 aa2.42□□□□□ -2.02
HERC3-209ENST00000504994 RIMBP3CA6NJZ7 1639 aa2.42□□□□□ -2.02
HERC3-209ENST00000504994 RIMBP3BA6NNM3 1639 aa2.42□□□□□ -2.02
HERC3-209ENST00000504994 ZCCHC11Q5TAX3 1644 aaKnown RBP2.42□□□□□ -2.02
HERC3-209ENST00000504994 RIMBP3Q9UFD9 1639 aa2.42□□□□□ -2.02
HERC3-209ENST00000504994 ADGRB3O60242 1522 aa2.42□□□□□ -2.02
HERC3-209ENST00000504994 MYO9BQ13459 2157 aa2.42□□□□□ -2.02
HERC3-209ENST00000504994 N4BP2Q86UW6 1770 aaPredicted RBP2.41□□□□□ -2.02
HERC3-209ENST00000504994 IGKV1D-42A0A075B6H8 117 aa2.41□□□□□ -2.02
HERC3-209ENST00000504994 TRGV10A0A0A0MS01 117 aa2.41□□□□□ -2.02
HERC3-209ENST00000504994 TRDV1A0A1B0GX56 115 aa2.41□□□□□ -2.02
HERC3-209ENST00000504994 NAPSAO96009 420 aa2.41□□□□□ -2.02
HERC3-209ENST00000504994 PMP2P02689 132 aa2.41□□□□□ -2.02
HERC3-209ENST00000504994 RPS3P23396 243 aaKnown RBP eCLIP2.41□□□□□ -2.02
HERC3-209ENST00000504994 POLR2HP52434 150 aaKnown RBP2.41□□□□□ -2.02
HERC3-209ENST00000504994 TMBIM6P55061 237 aa2.41□□□□□ -2.02
HERC3-209ENST00000504994 NDUFA5Q16718 116 aa2.41□□□□□ -2.02
HERC3-209ENST00000504994 AAED1Q7RTV5 226 aa2.41□□□□□ -2.02
HERC3-209ENST00000504994 DEFB128Q7Z7B8 93 aa2.41□□□□□ -2.02
HERC3-209ENST00000504994 AIF1LQ9BQI0 150 aa2.41□□□□□ -2.02
HERC3-209ENST00000504994 POPDC3Q9HBV1 291 aa2.41□□□□□ -2.02
HERC3-209ENST00000504994 COL4A2P08572 1712 aa2.41□□□□□ -2.02
HERC3-209ENST00000504994 NUP210Q8TEM1 1887 aaPredicted RBP2.41□□□□□ -2.02
HERC3-209ENST00000504994 XIRP1Q702N8 1843 aaKnown RBP2.4□□□□□ -2.02
HERC3-209ENST00000504994 IGLV3-9A0A075B6K5 115 aa2.4□□□□□ -2.03
HERC3-209ENST00000504994 A0A087WX48 190 aa2.4□□□□□ -2.03
HERC3-209ENST00000504994 TRGV4A0A0C4DH28 118 aa2.4□□□□□ -2.03
HERC3-209ENST00000504994 C7orf71A4D174 169 aa2.4□□□□□ -2.03
HERC3-209ENST00000504994 NDUFB3O43676 98 aa2.4□□□□□ -2.03
HERC3-209ENST00000504994 S100A11P31949 105 aa2.4□□□□□ -2.03
HERC3-209ENST00000504994 ARPP19P56211 112 aa2.4□□□□□ -2.03
HERC3-209ENST00000504994 PLCXD2Q0VAA5 305 aa2.4□□□□□ -2.03
HERC3-209ENST00000504994 NUMA1Q14980 2115 aa2.4□□□□□ -2.03
HERC3-209ENST00000504994 TMEM155Q4W5P6 130 aa2.4□□□□□ -2.03
HERC3-209ENST00000504994 KRTAP5-1Q6L8H4 278 aa2.4□□□□□ -2.03
HERC3-209ENST00000504994 BRD3OSQ6XYD6 125 aa2.4□□□□□ -2.03
HERC3-209ENST00000504994 PRR15Q8IV56 129 aa2.4□□□□□ -2.03
HERC3-209ENST00000504994 NPCDR1Q9BY65 106 aa2.4□□□□□ -2.03
HERC3-209ENST00000504994 YIPF3Q9GZM5 350 aa2.4□□□□□ -2.03
HERC3-209ENST00000504994 RIC1Q4ADV7 1423 aa2.4□□□□□ -2.03
HERC3-209ENST00000504994 CD109Q6YHK3 1445 aa2.4□□□□□ -2.03
HERC3-209ENST00000504994 ADGBQ8N7X0 1667 aa2.39□□□□□ -2.03
HERC3-209ENST00000504994 TRAV3A0A0B4J244 114 aa2.39□□□□□ -2.03
HERC3-209ENST00000504994 KPNA4O00629 521 aaPredicted RBP2.39□□□□□ -2.03
HERC3-209ENST00000504994 ZNF737O75373 536 aa2.39□□□□□ -2.03
HERC3-209ENST00000504994 BCL2P10415 239 aa2.39□□□□□ -2.03
HERC3-209ENST00000504994 BRMS1LQ5PSV4 323 aa2.39□□□□□ -2.03
HERC3-209ENST00000504994 CROCCP2Q86T23 111 aa2.39□□□□□ -2.03
HERC3-209ENST00000504994 ANGPTL5Q86XS5 388 aa2.39□□□□□ -2.03
HERC3-209ENST00000504994 SLC30A7Q8NEW0 376 aa2.39□□□□□ -2.03
HERC3-209ENST00000504994 SPACA4Q8TDM5 124 aa2.39□□□□□ -2.03
HERC3-209ENST00000504994 ISOC1Q96CN7 298 aa2.39□□□□□ -2.03
HERC3-209ENST00000504994 SLC25A21Q9BQT8 299 aaPredicted RBP2.39□□□□□ -2.03
HERC3-209ENST00000504994 CXCL16Q9H2A7 254 aa2.39□□□□□ -2.03
HERC3-209ENST00000504994 TAS2R7Q9NYW3 318 aa2.39□□□□□ -2.03
HERC3-209ENST00000504994 TRAPPC2LQ9UL33 140 aa2.39□□□□□ -2.03
HERC3-209ENST00000504994 LAMTOR2Q9Y2Q5 125 aa2.39□□□□□ -2.03
HERC3-209ENST00000504994 MED31Q9Y3C7 131 aa2.39□□□□□ -2.03
HERC3-209ENST00000504994 LHFPL6Q9Y693 200 aa2.39□□□□□ -2.03
HERC3-209ENST00000504994 NUP98P52948 1817 aa2.39□□□□□ -2.03
HERC3-209ENST00000504994 MYO5AQ9Y4I1 1855 aaKnown RBP2.39□□□□□ -2.03
HERC3-209ENST00000504994 ZCCHC6Q5VYS8 1495 aaKnown RBP2.39□□□□□ -2.03
HERC3-209ENST00000504994 CEP164Q9UPV0 1460 aa2.39□□□□□ -2.03
HERC3-209ENST00000504994 RTEL1-TNFRSF6BF6WH68 1400 aa2.38□□□□□ -2.03
HERC3-209ENST00000504994 GABARAPH6UMI1 98 aa2.38□□□□□ -2.03
HERC3-209ENST00000504994 SDCBPO00560 298 aaPredicted RBP2.38□□□□□ -2.03
HERC3-209ENST00000504994 IGKV4-1P06312 121 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms