RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 EBLN2Q6P2I7 272 aa11.42□□□□□ -0.58
TCOF1-207ENST00000504761 AGMATQ9BSE5 352 aa11.41□□□□□ -0.58
TCOF1-207ENST00000504761 RNASE7Q9H1E1 156 aaKnown RBP11.41□□□□□ -0.58
TCOF1-207ENST00000504761 A0A0G2JLM5 398 aa11.41□□□□□ -0.58
TCOF1-207ENST00000504761 MINOS1Q5TGZ0 78 aa11.41□□□□□ -0.58
TCOF1-207ENST00000504761 REG4Q9BYZ8 158 aa11.41□□□□□ -0.58
TCOF1-207ENST00000504761 MINOS1-NBL1R4GNA1 71 aa11.41□□□□□ -0.58
TCOF1-207ENST00000504761 FCER1GP30273 86 aa11.41□□□□□ -0.58
TCOF1-207ENST00000504761 PSG9Q00887 426 aa11.41□□□□□ -0.58
TCOF1-207ENST00000504761 DERL1Q9BUN8 251 aa11.41□□□□□ -0.58
TCOF1-207ENST00000504761 GPR61Q9BZJ8 451 aa11.41□□□□□ -0.58
TCOF1-207ENST00000504761 CD5P06127 495 aa11.41□□□□□ -0.58
TCOF1-207ENST00000504761 OR5AL1P0C617 328 aa11.41□□□□□ -0.58
TCOF1-207ENST00000504761 MEOX2P50222 304 aa11.4□□□□□ -0.58
TCOF1-207ENST00000504761 MRPL18Q9H0U6 180 aaKnown RBP11.4□□□□□ -0.58
TCOF1-207ENST00000504761 DYSFO75923 2080 aa11.4□□□□□ -0.58
TCOF1-207ENST00000504761 ITGB1BP1O14713 200 aa11.4□□□□□ -0.58
TCOF1-207ENST00000504761 LHBP01229 141 aa11.4□□□□□ -0.58
TCOF1-207ENST00000504761 TRGC1P0CF51 173 aa11.4□□□□□ -0.58
TCOF1-207ENST00000504761 COX19Q49B96 90 aa11.4□□□□□ -0.58
TCOF1-207ENST00000504761 NRGNQ92686 78 aa11.4□□□□□ -0.58
TCOF1-207ENST00000504761 SCRT1Q9BWW7 348 aa11.4□□□□□ -0.58
TCOF1-207ENST00000504761 STAG3L2P0CL84 134 aa11.4□□□□□ -0.59
TCOF1-207ENST00000504761 STAG3L3P0CL85 134 aa11.4□□□□□ -0.59
TCOF1-207ENST00000504761 SRD5A1P18405 259 aa11.4□□□□□ -0.59
TCOF1-207ENST00000504761 OR5AN1Q8NGI8 311 aa11.4□□□□□ -0.59
TCOF1-207ENST00000504761 TRAV41A0A0B4J266 112 aa11.39□□□□□ -0.59
TCOF1-207ENST00000504761 RPL15P61313 204 aaKnown RBP11.39□□□□□ -0.59
TCOF1-207ENST00000504761 IMMP2LQ96T52 175 aa11.39□□□□□ -0.59
TCOF1-207ENST00000504761 NPFFR1Q9GZQ6 430 aa11.39□□□□□ -0.59
TCOF1-207ENST00000504761 F11RQ9Y624 299 aaKnown RBP11.39□□□□□ -0.59
TCOF1-207ENST00000504761 CXorf65A6NEN9 183 aa11.39□□□□□ -0.59
TCOF1-207ENST00000504761 PMS2P5A8MQ11 134 aa11.39□□□□□ -0.59
TCOF1-207ENST00000504761 GPX1P07203 203 aa11.39□□□□□ -0.59
TCOF1-207ENST00000504761 IQCJQ1A5X6 159 aa11.39□□□□□ -0.59
TCOF1-207ENST00000504761 VAMP8Q9BV40 100 aa11.39□□□□□ -0.59
TCOF1-207ENST00000504761 FOXA3P55318 350 aaPredicted RBP11.39□□□□□ -0.59
TCOF1-207ENST00000504761 OCC1Q8TAD7 63 aa11.39□□□□□ -0.59
TCOF1-207ENST00000504761 MOB4Q9Y3A3 225 aa11.39□□□□□ -0.59
TCOF1-207ENST00000504761 C9JQL5 133 aa11.39□□□□□ -0.59
TCOF1-207ENST00000504761 RAB9AP51151 201 aa11.39□□□□□ -0.59
TCOF1-207ENST00000504761 TMEM14BQ9NUH8 114 aa11.39□□□□□ -0.59
TCOF1-207ENST00000504761 TEX29Q8N6K0 151 aa11.38□□□□□ -0.59
TCOF1-207ENST00000504761 GLMPQ8WWB7 406 aa11.38□□□□□ -0.59
TCOF1-207ENST00000504761 ELOVL1Q9BW60 279 aa11.38□□□□□ -0.59
TCOF1-207ENST00000504761 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.38□□□□□ -0.59
TCOF1-207ENST00000504761 SRIP30626 198 aa11.38□□□□□ -0.59
TCOF1-207ENST00000504761 GUSBP1Q15486 140 aa11.38□□□□□ -0.59
TCOF1-207ENST00000504761 NUP210LQ5VU65 1888 aa11.38□□□□□ -0.59
TCOF1-207ENST00000504761 CA1P00915 261 aaPredicted RBP11.37□□□□□ -0.59
TCOF1-207ENST00000504761 PRSS1P07477 247 aa11.37□□□□□ -0.59
TCOF1-207ENST00000504761 MSMBP08118 114 aa11.37□□□□□ -0.59
TCOF1-207ENST00000504761 IL15RAQ13261 267 aa11.37□□□□□ -0.59
TCOF1-207ENST00000504761 CRIP3Q6Q6R5 217 aa11.37□□□□□ -0.59
TCOF1-207ENST00000504761 ZNF600Q6ZNG1 722 aa11.37□□□□□ -0.59
TCOF1-207ENST00000504761 ZNF833PQ6ZTB9 187 aa11.37□□□□□ -0.59
TCOF1-207ENST00000504761 EXOC3-AS1Q8N2X6 119 aa11.37□□□□□ -0.59
TCOF1-207ENST00000504761 BEND2Q8NDZ0 799 aa11.37□□□□□ -0.59
TCOF1-207ENST00000504761 ABCA12Q86UK0 2595 aa11.37□□□□□ -0.59
TCOF1-207ENST00000504761 A0A1B0GWJ7 208 aa11.37□□□□□ -0.59
TCOF1-207ENST00000504761 DSCR9P59020 149 aa11.37□□□□□ -0.59
TCOF1-207ENST00000504761 PVRIGQ6DKI7 326 aa11.37□□□□□ -0.59
TCOF1-207ENST00000504761 PRSS22Q9GZN4 317 aa11.37□□□□□ -0.59
TCOF1-207ENST00000504761 OOSP1A8MZH6 123 aa11.37□□□□□ -0.59
TCOF1-207ENST00000504761 KAAG1Q9UBP8 84 aa11.37□□□□□ -0.59
TCOF1-207ENST00000504761 WT1-ASQ06250 92 aa11.37□□□□□ -0.59
TCOF1-207ENST00000504761 MST1LQ2TV78 715 aa11.37□□□□□ -0.59
TCOF1-207ENST00000504761 RNF5Q99942 180 aa11.37□□□□□ -0.59
TCOF1-207ENST00000504761 G3V318 75 aa11.36□□□□□ -0.59
TCOF1-207ENST00000504761 SMUG1Q53HV7 270 aa11.36□□□□□ -0.59
TCOF1-207ENST00000504761 HAPLN4Q86UW8 402 aa11.36□□□□□ -0.59
TCOF1-207ENST00000504761 NCOR1P1Q9H4R4 102 aa11.36□□□□□ -0.59
TCOF1-207ENST00000504761 M0QZK8 103 aa11.36□□□□□ -0.59
TCOF1-207ENST00000504761 TCTAP57738 103 aa11.36□□□□□ -0.59
TCOF1-207ENST00000504761 EPDR1Q9UM22 224 aa11.36□□□□□ -0.59
TCOF1-207ENST00000504761 NDPQ00604 133 aa11.36□□□□□ -0.59
TCOF1-207ENST00000504761 PRR31Q5SQ13 230 aa11.36□□□□□ -0.59
TCOF1-207ENST00000504761 C8orf46Q8TAG6 207 aa11.36□□□□□ -0.59
TCOF1-207ENST00000504761 GPR82Q96P67 336 aa11.36□□□□□ -0.59
TCOF1-207ENST00000504761 A0A1W2PRE2 83 aa11.35□□□□□ -0.59
TCOF1-207ENST00000504761 GCGP01275 180 aa11.35□□□□□ -0.59
TCOF1-207ENST00000504761 VDAC2P45880 294 aaPredicted RBP11.35□□□□□ -0.59
TCOF1-207ENST00000504761 VN1R17PQ8TDU5 208 aa11.35□□□□□ -0.59
TCOF1-207ENST00000504761 ZNF462Q96JM2 2506 aa11.35□□□□□ -0.59
TCOF1-207ENST00000504761 HLA-DQA1P01909 254 aa11.35□□□□□ -0.59
TCOF1-207ENST00000504761 RNF224P0DH78 156 aa11.35□□□□□ -0.59
TCOF1-207ENST00000504761 CKS2P33552 79 aa11.35□□□□□ -0.59
TCOF1-207ENST00000504761 UBE2E1P51965 193 aa11.35□□□□□ -0.59
TCOF1-207ENST00000504761 IGFL4Q6B9Z1 124 aa11.35□□□□□ -0.59
TCOF1-207ENST00000504761 SPSB3Q6PJ21 355 aa11.35□□□□□ -0.59
TCOF1-207ENST00000504761 DMRTC2Q8IXT2 367 aaPredicted RBP11.35□□□□□ -0.59
TCOF1-207ENST00000504761 ITLN2Q8WWU7 325 aaPredicted RBP11.35□□□□□ -0.59
TCOF1-207ENST00000504761 WFDC12Q8WWY7 111 aa11.35□□□□□ -0.59
TCOF1-207ENST00000504761 NDUFA4L2Q9NRX3 87 aa11.35□□□□□ -0.59
TCOF1-207ENST00000504761 POLQO75417 2590 aa11.35□□□□□ -0.59
TCOF1-207ENST00000504761 IGHV2-70P01814 119 aa11.35□□□□□ -0.59
TCOF1-207ENST00000504761 Q5PR19 223 aa11.35□□□□□ -0.59
TCOF1-207ENST00000504761 TCF23Q7RTU1 214 aa11.35□□□□□ -0.59
TCOF1-207ENST00000504761 OR8A1Q8NGG7 326 aa11.35□□□□□ -0.59
TCOF1-207ENST00000504761 HSPB9Q9BQS6 159 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms