RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 VSIG2Q96IQ7 327 aa8.38□□□□□ -1.07
LSM6-204ENST00000504181 LINC01587Q99440 93 aa8.38□□□□□ -1.07
LSM6-204ENST00000504181 RPRMQ9NS64 109 aa8.38□□□□□ -1.07
LSM6-204ENST00000504181 ADAP1O75689 374 aa8.37□□□□□ -1.07
LSM6-204ENST00000504181 IGLC1P0CG04 106 aa8.37□□□□□ -1.07
LSM6-204ENST00000504181 RNASE2P10153 161 aaKnown RBP8.37□□□□□ -1.07
LSM6-204ENST00000504181 CALRP27797 417 aaKnown RBP8.37□□□□□ -1.07
LSM6-204ENST00000504181 GNG2P59768 71 aa8.37□□□□□ -1.07
LSM6-204ENST00000504181 AHSA2Q719I0 299 aa8.37□□□□□ -1.07
LSM6-204ENST00000504181 TMEM144Q7Z5S9 345 aa8.37□□□□□ -1.07
LSM6-204ENST00000504181 CCDC197Q8NCU1 140 aa8.37□□□□□ -1.07
LSM6-204ENST00000504181 ZNF555Q8NEP9 628 aa8.37□□□□□ -1.07
LSM6-204ENST00000504181 C20orf173Q96LM9 149 aa8.37□□□□□ -1.07
LSM6-204ENST00000504181 PGLYRP1O75594 196 aaPredicted RBP8.36□□□□□ -1.07
LSM6-204ENST00000504181 ARL6IP5O75915 188 aa8.36□□□□□ -1.07
LSM6-204ENST00000504181 LINC00612Q8N6U2 182 aa8.36□□□□□ -1.07
LSM6-204ENST00000504181 BEST4Q8NFU0 473 aa8.36□□□□□ -1.07
LSM6-204ENST00000504181 OR1S2Q8NGQ3 325 aa8.36□□□□□ -1.07
LSM6-204ENST00000504181 OR6F1Q8NGZ6 308 aa8.36□□□□□ -1.07
LSM6-204ENST00000504181 LINC00467Q9BRT7 94 aa8.36□□□□□ -1.07
LSM6-204ENST00000504181 TMPRSS5Q9H3S3 457 aa8.36□□□□□ -1.07
LSM6-204ENST00000504181 DAPK2Q9UIK4 370 aa8.36□□□□□ -1.07
LSM6-204ENST00000504181 FAT4Q6V0I7 4981 aa8.36□□□□□ -1.07
LSM6-204ENST00000504181 ISLRO14498 428 aa8.35□□□□□ -1.07
LSM6-204ENST00000504181 FCER2P06734 321 aa8.35□□□□□ -1.07
LSM6-204ENST00000504181 UCP1P25874 307 aa8.35□□□□□ -1.07
LSM6-204ENST00000504181 OR10J1P30954 320 aa8.35□□□□□ -1.07
LSM6-204ENST00000504181 CNN1P51911 297 aaKnown RBP8.35□□□□□ -1.07
LSM6-204ENST00000504181 SUB1P53999 127 aaKnown RBP eCLIP8.35□□□□□ -1.074e-6■■■□□ 17.5
LSM6-204ENST00000504181 OR10A3P58181 314 aa8.35□□□□□ -1.07
LSM6-204ENST00000504181 TAS2R60P59551 318 aa8.35□□□□□ -1.07
LSM6-204ENST00000504181 YPEL3P61236 119 aaPredicted RBP8.35□□□□□ -1.07
LSM6-204ENST00000504181 RPS25P62851 125 aaKnown RBP8.35□□□□□ -1.07
LSM6-204ENST00000504181 TBCEQ15813 527 aaPredicted RBP8.35□□□□□ -1.07
LSM6-204ENST00000504181 SFXN4Q6P4A7 337 aa8.35□□□□□ -1.07
LSM6-204ENST00000504181 H2BFWTQ7Z2G1 175 aa8.35□□□□□ -1.07
LSM6-204ENST00000504181 CMTM1Q8IZ96 169 aa8.35□□□□□ -1.07
LSM6-204ENST00000504181 SLC35G3Q8N808 338 aa8.35□□□□□ -1.07
LSM6-204ENST00000504181 RNASE8Q8TDE3 154 aaKnown RBP8.35□□□□□ -1.07
LSM6-204ENST00000504181 SEC22AQ96IW7 307 aa8.35□□□□□ -1.07
LSM6-204ENST00000504181 C9orf16Q9BUW7 83 aa8.35□□□□□ -1.07
LSM6-204ENST00000504181 ZNF98A6NK75 572 aa8.34□□□□□ -1.07
LSM6-204ENST00000504181 RND2P52198 227 aa8.34□□□□□ -1.07
LSM6-204ENST00000504181 HERV-K104P61576 105 aa8.34□□□□□ -1.07
LSM6-204ENST00000504181 GPR141Q7Z602 305 aa8.34□□□□□ -1.07
LSM6-204ENST00000504181 TMEM256Q8N2U0 113 aa8.34□□□□□ -1.07
LSM6-204ENST00000504181 OR51G1Q8NGK1 321 aa8.34□□□□□ -1.07
LSM6-204ENST00000504181 TMEM263Q8WUH6 116 aaKnown RBP8.34□□□□□ -1.07
LSM6-204ENST00000504181 SLC25A39Q9BZJ4 359 aaPredicted RBP8.34□□□□□ -1.07
LSM6-204ENST00000504181 CCDC90BQ9GZT6 254 aa8.34□□□□□ -1.07
LSM6-204ENST00000504181 IGLV2-8P01709 118 aa8.33□□□□□ -1.08
LSM6-204ENST00000504181 RLN2P04090 185 aa8.33□□□□□ -1.08
LSM6-204ENST00000504181 EVI2AP22794 236 aa8.33□□□□□ -1.08
LSM6-204ENST00000504181 IZUMO4Q1ZYL8 232 aa8.33□□□□□ -1.08
LSM6-204ENST00000504181 ZNF493Q6ZR52 646 aa8.33□□□□□ -1.08
LSM6-204ENST00000504181 WFDC10BQ8IUB3 73 aa8.33□□□□□ -1.08
LSM6-204ENST00000504181 BORCS5Q969J3 196 aa8.33□□□□□ -1.08
LSM6-204ENST00000504181 DAZAP1Q96EP5 407 aaKnown RBP8.33□□□□□ -1.08
LSM6-204ENST00000504181 PBDC1Q9BVG4 233 aa8.33□□□□□ -1.08
LSM6-204ENST00000504181 MND1Q9BWT6 205 aa8.33□□□□□ -1.08
LSM6-204ENST00000504181 IFITM5A6NNB3 132 aa8.32□□□□□ -1.08
LSM6-204ENST00000504181 BOLA2-SMG1P6H3BVE0 249 aa8.32□□□□□ -1.08
LSM6-204ENST00000504181 IGKV1-39P01597 117 aa8.32□□□□□ -1.08
LSM6-204ENST00000504181 IGKV1D-39P04432 117 aa8.32□□□□□ -1.08
LSM6-204ENST00000504181 RPL5P46777 297 aaKnown RBP8.32□□□□□ -1.08
LSM6-204ENST00000504181 HSPA13P48723 471 aa8.32□□□□□ -1.08
LSM6-204ENST00000504181 RPL37AP61513 92 aaKnown RBP8.32□□□□□ -1.08
LSM6-204ENST00000504181 LINC01620Q4KN68 170 aa8.32□□□□□ -1.08
LSM6-204ENST00000504181 LELP1Q5T871 98 aa8.32□□□□□ -1.08
LSM6-204ENST00000504181 UFD1Q92890 307 aa8.32□□□□□ -1.08
LSM6-204ENST00000504181 MRGPRFQ96AM1 343 aa8.32□□□□□ -1.08
LSM6-204ENST00000504181 C16orf92Q96LL3 132 aa8.32□□□□□ -1.08
LSM6-204ENST00000504181 PSORS1C1Q9UIG5 152 aa8.32□□□□□ -1.08
LSM6-204ENST00000504181 ICOSQ9Y6W8 199 aa8.32□□□□□ -1.08
LSM6-204ENST00000504181 CASQ2O14958 399 aaPredicted RBP8.31□□□□□ -1.08
LSM6-204ENST00000504181 DUSP14O95147 198 aaKnown RBP8.31□□□□□ -1.08
LSM6-204ENST00000504181 TOMM40O96008 361 aa8.31□□□□□ -1.08
LSM6-204ENST00000504181 RD3LP0DJH9 198 aa8.31□□□□□ -1.08
LSM6-204ENST00000504181 NUP62P37198 522 aaPredicted RBP8.31□□□□□ -1.08
LSM6-204ENST00000504181 SPHARQ15513 63 aa8.31□□□□□ -1.08
LSM6-204ENST00000504181 PRSS54Q6PEW0 395 aa8.31□□□□□ -1.08
LSM6-204ENST00000504181 LYPD5Q6UWN5 251 aa8.31□□□□□ -1.08
LSM6-204ENST00000504181 CHAC1Q9BUX1 264 aa8.31□□□□□ -1.08
LSM6-204ENST00000504181 DNAJC4Q9NNZ3 241 aa8.31□□□□□ -1.08
LSM6-204ENST00000504181 LSM2Q9Y333 95 aaKnown RBP8.31□□□□□ -1.08
LSM6-204ENST00000504181 A0A0B4J293 547 aa8.3□□□□□ -1.08
LSM6-204ENST00000504181 LOC100996750A0A140TA64 210 aa8.3□□□□□ -1.08
LSM6-204ENST00000504181 INS-IGF2F8WCM5 200 aa8.3□□□□□ -1.08
LSM6-204ENST00000504181 K7EP13 123 aa8.3□□□□□ -1.08
LSM6-204ENST00000504181 CRYGDP07320 174 aa8.3□□□□□ -1.08
LSM6-204ENST00000504181 PSG1P11464 419 aa8.3□□□□□ -1.08
LSM6-204ENST00000504181 ZNF182P17025 639 aaPredicted RBP8.3□□□□□ -1.08
LSM6-204ENST00000504181 ETV6P41212 452 aa8.3□□□□□ -1.08
LSM6-204ENST00000504181 SUPT4H1P63272 117 aaKnown RBP8.3□□□□□ -1.08
LSM6-204ENST00000504181 HOGA1Q86XE5 327 aa8.3□□□□□ -1.08
LSM6-204ENST00000504181 CIRBP-AS1Q8TBR5 109 aa8.3□□□□□ -1.08
LSM6-204ENST00000504181 CYGBQ8WWM9 190 aa8.3□□□□□ -1.08
LSM6-204ENST00000504181 KRTAP4-6Q9BYQ5 205 aa8.3□□□□□ -1.08
LSM6-204ENST00000504181 SNURFLB1AK76 121 aa8.29□□□□□ -1.08
LSM6-204ENST00000504181 HSMCR30P0CW71 290 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms