RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 DCANP1Q8TF63 244 aa8.75□□□□□ -1.01
MED28-203ENST00000503945 PHLDA1Q8WV24 401 aaPredicted RBP8.75□□□□□ -1.01
MED28-203ENST00000503945 RAB40CQ96S21 281 aa8.75□□□□□ -1.01
MED28-203ENST00000503945 MFFQ9GZY8 342 aa8.75□□□□□ -1.01
MED28-203ENST00000503945 ZFP92A6NM28 416 aa8.74□□□□□ -1.01
MED28-203ENST00000503945 BUB3O43684 328 aa8.74□□□□□ -1.01
MED28-203ENST00000503945 MED6O75586 246 aa8.74□□□□□ -1.01
MED28-203ENST00000503945 ZNF688P0C7X2 276 aa8.74□□□□□ -1.01
MED28-203ENST00000503945 SPP1P10451 314 aa8.74□□□□□ -1.01
MED28-203ENST00000503945 SLC25A6P12236 298 aa8.74□□□□□ -1.01
MED28-203ENST00000503945 VAMP1P23763 118 aa8.74□□□□□ -1.01
MED28-203ENST00000503945 ACTL10Q5JWF8 245 aa8.74□□□□□ -1.01
MED28-203ENST00000503945 CENPSQ8N2Z9 138 aa8.74□□□□□ -1.01
MED28-203ENST00000503945 KNCNA6PVL3 124 aa8.73□□□□□ -1.01
MED28-203ENST00000503945 PITX3O75364 302 aa8.73□□□□□ -1.01
MED28-203ENST00000503945 INPP1P49441 399 aa8.73□□□□□ -1.01
MED28-203ENST00000503945 NUTF2P61970 127 aaKnown RBP8.73□□□□□ -1.01
MED28-203ENST00000503945 GAMTQ14353 236 aa8.73□□□□□ -1.01
MED28-203ENST00000503945 USF2Q15853 346 aaPredicted RBP8.73□□□□□ -1.01
MED28-203ENST00000503945 PSMG4Q5JS54 123 aa8.73□□□□□ -1.01
MED28-203ENST00000503945 SPANXN2Q5MJ10 180 aa8.73□□□□□ -1.01
MED28-203ENST00000503945 SIGLEC15Q6ZMC9 328 aa8.73□□□□□ -1.01
MED28-203ENST00000503945 TRPT1Q86TN4 253 aaKnown RBP8.73□□□□□ -1.01
MED28-203ENST00000503945 LRTM2Q8N967 370 aa8.73□□□□□ -1.01
MED28-203ENST00000503945 GLMPQ8WWB7 406 aa8.73□□□□□ -1.01
MED28-203ENST00000503945 SLC35E1Q96K37 410 aa8.73□□□□□ -1.01
MED28-203ENST00000503945 CIB3Q96Q77 187 aaPredicted RBP8.73□□□□□ -1.01
MED28-203ENST00000503945 KRTAP3-3Q9BYR6 98 aa8.73□□□□□ -1.01
MED28-203ENST00000503945 KRTAP3-2Q9BYR7 98 aa8.73□□□□□ -1.01
MED28-203ENST00000503945 SEPSECSQ9HD40 501 aaKnown RBP8.73□□□□□ -1.01
MED28-203ENST00000503945 FBXL17Q9UF56 701 aa8.73□□□□□ -1.01
MED28-203ENST00000503945 PAIP2BQ9ULR5 123 aaKnown RBP8.73□□□□□ -1.01
MED28-203ENST00000503945 TMED3Q9Y3Q3 217 aa8.73□□□□□ -1.01
MED28-203ENST00000503945 FAM90A26D6RGX4 464 aa8.72□□□□□ -1.01
MED28-203ENST00000503945 DEFB4AO15263 64 aa8.72□□□□□ -1.01
MED28-203ENST00000503945 SFT2D2O95562 160 aa8.72□□□□□ -1.01
MED28-203ENST00000503945 NUP62P37198 522 aaPredicted RBP8.72□□□□□ -1.01
MED28-203ENST00000503945 NANOS2P60321 138 aaKnown RBP8.72□□□□□ -1.01
MED28-203ENST00000503945 CCDC190Q86UF4 302 aa8.72□□□□□ -1.01
MED28-203ENST00000503945 TRIM63Q969Q1 353 aa8.72□□□□□ -1.01
MED28-203ENST00000503945 RNF125Q96EQ8 232 aa8.72□□□□□ -1.01
MED28-203ENST00000503945 PBDC1Q9BVG4 233 aa8.72□□□□□ -1.01
MED28-203ENST00000503945 C11orf68Q9H3H3 251 aaKnown RBP8.72□□□□□ -1.01
MED28-203ENST00000503945 NRN1Q9NPD7 142 aa8.72□□□□□ -1.01
MED28-203ENST00000503945 V9GYH0 126 aa8.72□□□□□ -1.01
MED28-203ENST00000503945 HOXB5P09067 269 aa8.71□□□□□ -1.02
MED28-203ENST00000503945 ID1P41134 155 aa8.71□□□□□ -1.02
MED28-203ENST00000503945 ZNF90Q03938 601 aa8.71□□□□□ -1.02
MED28-203ENST00000503945 ZNF79Q15937 498 aa8.71□□□□□ -1.02
MED28-203ENST00000503945 GGNBP1Q5YKI7 109 aa8.71□□□□□ -1.02
MED28-203ENST00000503945 OR8G2PQ6IF36 304 aa8.71□□□□□ -1.02
MED28-203ENST00000503945 PPP1R14BQ96C90 147 aa8.71□□□□□ -1.02
MED28-203ENST00000503945 C1QTNF4Q9BXJ3 329 aa8.71□□□□□ -1.02
MED28-203ENST00000503945 HERC2O95714 4834 aa8.71□□□□□ -1.02
MED28-203ENST00000503945 NAP1L6A6NFF2 107 aa8.7□□□□□ -1.02
MED28-203ENST00000503945 ZNF701M0R085 212 aaPredicted RBP8.7□□□□□ -1.02
MED28-203ENST00000503945 WRBO00258 174 aa8.7□□□□□ -1.02
MED28-203ENST00000503945 SYNGR2O43760 224 aa8.7□□□□□ -1.02
MED28-203ENST00000503945 CFDP00746 253 aaPredicted RBP8.7□□□□□ -1.02
MED28-203ENST00000503945 GIG44P09565 113 aaPredicted RBP8.7□□□□□ -1.02
MED28-203ENST00000503945 IAPPP10997 89 aa8.7□□□□□ -1.02
MED28-203ENST00000503945 MIFP14174 115 aa8.7□□□□□ -1.02
MED28-203ENST00000503945 PPP1R1AQ13522 171 aa8.7□□□□□ -1.02
MED28-203ENST00000503945 C1orf194Q5T5A4 169 aa8.7□□□□□ -1.02
MED28-203ENST00000503945 RPP25LQ8N5L8 163 aaKnown RBP8.7□□□□□ -1.02
MED28-203ENST00000503945 C2CD4CQ8TF44 421 aa8.7□□□□□ -1.02
MED28-203ENST00000503945 MAGT1Q9H0U3 335 aa8.7□□□□□ -1.02
MED28-203ENST00000503945 CENPXA8MT69 81 aa8.69□□□□□ -1.02
MED28-203ENST00000503945 C11orf94C9JXX5 98 aa8.69□□□□□ -1.02
MED28-203ENST00000503945 S100A7P31151 101 aa8.69□□□□□ -1.02
MED28-203ENST00000503945 UBE2MP61081 183 aaKnown RBP8.69□□□□□ -1.02
MED28-203ENST00000503945 LYZP61626 148 aa8.69□□□□□ -1.02
MED28-203ENST00000503945 OR2F1Q13607 317 aa8.69□□□□□ -1.02
MED28-203ENST00000503945 SPANXN5Q5MJ07 72 aa8.69□□□□□ -1.02
MED28-203ENST00000503945 TRIQKQ629K1 86 aa8.69□□□□□ -1.02
MED28-203ENST00000503945 OR8I2Q8N0Y5 310 aa8.69□□□□□ -1.02
MED28-203ENST00000503945 LINC00052Q96N35 136 aa8.69□□□□□ -1.02
MED28-203ENST00000503945 TRGV9Q99603 122 aa8.69□□□□□ -1.02
MED28-203ENST00000503945 HRH4Q9H3N8 390 aa8.69□□□□□ -1.02
MED28-203ENST00000503945 CLEC5AQ9NY25 188 aa8.69□□□□□ -1.02
MED28-203ENST00000503945 TBC1D24Q9ULP9 559 aa8.69□□□□□ -1.02
MED28-203ENST00000503945 IGKV1D-37A0A075B6S9 117 aa8.68□□□□□ -1.02
MED28-203ENST00000503945 ZNF705EA8MWA4 302 aaPredicted RBP8.68□□□□□ -1.02
MED28-203ENST00000503945 H3BMM0 161 aa8.68□□□□□ -1.02
MED28-203ENST00000503945 IFNA21P01568 189 aa8.68□□□□□ -1.02
MED28-203ENST00000503945 RBMY1A1P0DJD3 496 aaKnown RBP8.68□□□□□ -1.02
MED28-203ENST00000503945 RBMY1CP0DJD4 496 aa8.68□□□□□ -1.02
MED28-203ENST00000503945 NKX2-1P43699 371 aaPredicted RBP8.68□□□□□ -1.02
MED28-203ENST00000503945 TCTAP57738 103 aa8.68□□□□□ -1.02
MED28-203ENST00000503945 RBMY1FQ15415 496 aaKnown RBP8.68□□□□□ -1.02
MED28-203ENST00000503945 LGALS9CQ6DKI2 356 aa8.68□□□□□ -1.02
MED28-203ENST00000503945 CSNK1G2-AS1Q8NCQ2 148 aa8.68□□□□□ -1.02
MED28-203ENST00000503945 STRAPQ9Y3F4 350 aaKnown RBP8.68□□□□□ -1.02
MED28-203ENST00000503945 IGHV4-28A0A0C4DH34 117 aa8.67□□□□□ -1.02
MED28-203ENST00000503945 LINC00854A0A1B0GVQ3 168 aa8.67□□□□□ -1.02
MED28-203ENST00000503945 C9orf170A2RU37 121 aa8.67□□□□□ -1.02
MED28-203ENST00000503945 IGLL5B9A064 214 aa8.67□□□□□ -1.02
MED28-203ENST00000503945 ID3Q02535 119 aa8.67□□□□□ -1.02
MED28-203ENST00000503945 BAK1Q16611 211 aa8.67□□□□□ -1.02
MED28-203ENST00000503945 Q8NAQ8 132 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms