RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 OR4K13Q8NH42 304 aa3.09□□□□□ -1.91
HMGB1P21-201ENST00000502313 ABHD3Q8WU67 409 aa3.09□□□□□ -1.91
HMGB1P21-201ENST00000502313 CT55Q8WUE5 264 aa3.09□□□□□ -1.91
HMGB1P21-201ENST00000502313 ORAOV1Q8WV07 137 aa3.09□□□□□ -1.91
HMGB1P21-201ENST00000502313 PSMF1Q92530 271 aa3.09□□□□□ -1.91
HMGB1P21-201ENST00000502313 TSLPQ969D9 159 aa3.09□□□□□ -1.91
HMGB1P21-201ENST00000502313 FAM104AQ969W3 186 aa3.09□□□□□ -1.91
HMGB1P21-201ENST00000502313 APOBEC3DQ96AK3 386 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P21-201ENST00000502313 LINC00479Q96M42 142 aa3.09□□□□□ -1.91
HMGB1P21-201ENST00000502313 GPX7Q96SL4 187 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P21-201ENST00000502313 GPER1Q99527 375 aa3.09□□□□□ -1.91
HMGB1P21-201ENST00000502313 TMEM147Q9BVK8 224 aa3.09□□□□□ -1.91
HMGB1P21-201ENST00000502313 RSPO3Q9BXY4 272 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P21-201ENST00000502313 ALX4Q9H161 411 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P21-201ENST00000502313 MED11Q9P086 117 aa3.09□□□□□ -1.91
HMGB1P21-201ENST00000502313 PRNDQ9UKY0 176 aa3.09□□□□□ -1.91
HMGB1P21-201ENST00000502313 SHANK1Q9Y566 2161 aa3.09□□□□□ -1.91
HMGB1P21-201ENST00000502313 SCN2AQ99250 2005 aa3.09□□□□□ -1.92
HMGB1P21-201ENST00000502313 SCN3AQ9NY46 2000 aa3.09□□□□□ -1.92
HMGB1P21-201ENST00000502313 MAP1AP78559 2803 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P21-201ENST00000502313 CELSR1Q9NYQ6 3014 aa3.08□□□□□ -1.92
HMGB1P21-201ENST00000502313 A0A1W2PRE2 83 aa3.08□□□□□ -1.92
HMGB1P21-201ENST00000502313 RFPL4AA6NLU0 287 aa3.08□□□□□ -1.92
HMGB1P21-201ENST00000502313 TMEM212A6NML5 194 aa3.08□□□□□ -1.92
HMGB1P21-201ENST00000502313 LINC00587B1AMM8 73 aa3.08□□□□□ -1.92
HMGB1P21-201ENST00000502313 RFPL4AL1F8VTS6 287 aa3.08□□□□□ -1.92
HMGB1P21-201ENST00000502313 CDC42EP2O14613 210 aa3.08□□□□□ -1.92
HMGB1P21-201ENST00000502313 ORC5O43913 435 aa3.08□□□□□ -1.92
HMGB1P21-201ENST00000502313 C1QBP02746 253 aa3.08□□□□□ -1.92
HMGB1P21-201ENST00000502313 PRB1P04280 392 aa3.08□□□□□ -1.92
HMGB1P21-201ENST00000502313 HTR1AP08908 422 aa3.08□□□□□ -1.92
HMGB1P21-201ENST00000502313 SCGB1C2P0DMR2 95 aa3.08□□□□□ -1.92
HMGB1P21-201ENST00000502313 S100A2P29034 98 aa3.08□□□□□ -1.92
HMGB1P21-201ENST00000502313 PSMB3P49720 205 aa3.08□□□□□ -1.92
HMGB1P21-201ENST00000502313 CCR6P51684 374 aa3.08□□□□□ -1.92
HMGB1P21-201ENST00000502313 PPP3R1P63098 170 aa3.08□□□□□ -1.92
HMGB1P21-201ENST00000502313 HERVK_113P63121 156 aa3.08□□□□□ -1.92
HMGB1P21-201ENST00000502313 PLGLB1Q02325 96 aa3.08□□□□□ -1.92
HMGB1P21-201ENST00000502313 ZNF117Q03924 483 aa3.08□□□□□ -1.92
HMGB1P21-201ENST00000502313 FUT5Q11128 374 aa3.08□□□□□ -1.92
HMGB1P21-201ENST00000502313 DAZ2Q13117 558 aaKnown RBP3.08□□□□□ -1.92
HMGB1P21-201ENST00000502313 SMIM21Q3B7S5 101 aa3.08□□□□□ -1.92
HMGB1P21-201ENST00000502313 ZNF322Q6U7Q0 402 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P21-201ENST00000502313 LYPD2Q6UXB3 125 aa3.08□□□□□ -1.92
HMGB1P21-201ENST00000502313 SSX8Q7RTT4 187 aa3.08□□□□□ -1.92
HMGB1P21-201ENST00000502313 TCF23Q7RTU1 214 aa3.08□□□□□ -1.92
HMGB1P21-201ENST00000502313 DAZ4Q86SG3 579 aaKnown RBP3.08□□□□□ -1.92
HMGB1P21-201ENST00000502313 C1orf174Q8IYL3 243 aa3.08□□□□□ -1.92
HMGB1P21-201ENST00000502313 FAM24BQ8N5W8 94 aa3.08□□□□□ -1.92
HMGB1P21-201ENST00000502313 ANKRD29Q8N6D5 301 aa3.08□□□□□ -1.92
HMGB1P21-201ENST00000502313 GDPD1Q8N9F7 314 aa3.08□□□□□ -1.92
HMGB1P21-201ENST00000502313 OR5AK2Q8NH90 309 aa3.08□□□□□ -1.92
HMGB1P21-201ENST00000502313 SCGB1C1Q8TD33 95 aa3.08□□□□□ -1.92
HMGB1P21-201ENST00000502313 DNAJC30Q96LL9 226 aa3.08□□□□□ -1.92
HMGB1P21-201ENST00000502313 YPEL4Q96NS1 127 aa3.08□□□□□ -1.92
HMGB1P21-201ENST00000502313 NMNAT3Q96T66 252 aa3.08□□□□□ -1.92
HMGB1P21-201ENST00000502313 S100A13Q99584 98 aa3.08□□□□□ -1.92
HMGB1P21-201ENST00000502313 PARP12Q9H0J9 701 aaKnown RBP3.08□□□□□ -1.92
HMGB1P21-201ENST00000502313 TMEM222Q9H0R3 208 aa3.08□□□□□ -1.92
HMGB1P21-201ENST00000502313 RERGLQ9H628 205 aa3.08□□□□□ -1.92
HMGB1P21-201ENST00000502313 ZNF331Q9NQX6 463 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P21-201ENST00000502313 DAZ1Q9NQZ3 744 aaKnown RBP3.08□□□□□ -1.92
HMGB1P21-201ENST00000502313 DAZ3Q9NR90 486 aaKnown RBP3.08□□□□□ -1.92
HMGB1P21-201ENST00000502313 PLSCR3Q9NRY6 295 aa3.08□□□□□ -1.92
HMGB1P21-201ENST00000502313 NDUFB11Q9NX14 153 aa3.08□□□□□ -1.92
HMGB1P21-201ENST00000502313 ZNF581Q9P0T4 197 aa3.08□□□□□ -1.92
HMGB1P21-201ENST00000502313 ABRACLQ9P1F3 81 aa3.08□□□□□ -1.92
HMGB1P21-201ENST00000502313 LINC00527Q9UJ94 153 aa3.08□□□□□ -1.92
HMGB1P21-201ENST00000502313 MCTS1Q9ULC4 181 aaKnown RBP3.08□□□□□ -1.92
HMGB1P21-201ENST00000502313 ANAPC10Q9UM13 185 aa3.08□□□□□ -1.92
HMGB1P21-201ENST00000502313 RFNGQ9Y644 331 aa3.08□□□□□ -1.92
HMGB1P21-201ENST00000502313 TNRC6AQ8NDV7 1962 aaKnown RBP3.08□□□□□ -1.92
HMGB1P21-201ENST00000502313 CCDC88CQ9P219 2028 aa3.08□□□□□ -1.92
HMGB1P21-201ENST00000502313 NF1P21359 2839 aa3.07□□□□□ -1.92
HMGB1P21-201ENST00000502313 DOCK10Q96BY6 2186 aa3.07□□□□□ -1.92
HMGB1P21-201ENST00000502313 SVEP1Q4LDE5 3571 aa3.07□□□□□ -1.92
HMGB1P21-201ENST00000502313 TRAV27A0A087WT01 109 aa3.07□□□□□ -1.92
HMGB1P21-201ENST00000502313 TRAV8-1A0A0A6YYK1 113 aa3.07□□□□□ -1.92
HMGB1P21-201ENST00000502313 TRAV17A0A0B4J275 112 aa3.07□□□□□ -1.92
HMGB1P21-201ENST00000502313 A0A1B0GV90 55 aa3.07□□□□□ -1.92
HMGB1P21-201ENST00000502313 TMEM269A0A1B0GVZ9 245 aa3.07□□□□□ -1.92
HMGB1P21-201ENST00000502313 KNCNA6PVL3 124 aa3.07□□□□□ -1.92
HMGB1P21-201ENST00000502313 CD300LBA8K4G0 201 aa3.07□□□□□ -1.92
HMGB1P21-201ENST00000502313 TMEM250H0YL14 139 aa3.07□□□□□ -1.92
HMGB1P21-201ENST00000502313 MRPL33O75394 65 aaKnown RBP3.07□□□□□ -1.92
HMGB1P21-201ENST00000502313 CCNKO75909 580 aa3.07□□□□□ -1.92
HMGB1P21-201ENST00000502313 CDRT1O95170 752 aa3.07□□□□□ -1.92
HMGB1P21-201ENST00000502313 C1QCP02747 245 aa3.07□□□□□ -1.92
HMGB1P21-201ENST00000502313 CLPSP04118 112 aa3.07□□□□□ -1.92
HMGB1P21-201ENST00000502313 HSPB1P04792 205 aaKnown RBP3.07□□□□□ -1.92
HMGB1P21-201ENST00000502313 CFC1P0CG37 223 aa3.07□□□□□ -1.92
HMGB1P21-201ENST00000502313 SPI1P17947 270 aa3.07□□□□□ -1.92
HMGB1P21-201ENST00000502313 LSM3P62310 102 aaKnown RBP3.07□□□□□ -1.92
HMGB1P21-201ENST00000502313 RPL18Q07020 188 aaKnown RBP3.07□□□□□ -1.92
HMGB1P21-201ENST00000502313 NNATQ16517 81 aa3.07□□□□□ -1.92
HMGB1P21-201ENST00000502313 TMEM241Q24JQ0 296 aa3.07□□□□□ -1.92
HMGB1P21-201ENST00000502313 AKR1C8PQ5T2L2 129 aa3.07□□□□□ -1.92
HMGB1P21-201ENST00000502313 ATAD3CQ5T2N8 411 aa3.07□□□□□ -1.92
HMGB1P21-201ENST00000502313 GLT8D1Q68CQ7 371 aa3.07□□□□□ -1.92
HMGB1P21-201ENST00000502313 FAAP20Q6NZ36 180 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms