RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 CRYBB3P26998 211 aa12.59□□□□□ -0.39
PRKCB-210ENST00000498739 H2BFSP57053 126 aa12.59□□□□□ -0.39
PRKCB-210ENST00000498739 CYCSP99999 105 aaKnown RBP12.59□□□□□ -0.39
PRKCB-210ENST00000498739 OR2F1Q13607 317 aa12.59□□□□□ -0.39
PRKCB-210ENST00000498739 USF2Q15853 346 aaPredicted RBP12.59□□□□□ -0.39
PRKCB-210ENST00000498739 NARS2Q96I59 477 aaKnown RBP12.59□□□□□ -0.39
PRKCB-210ENST00000498739 NEURL2Q9BR09 285 aa12.59□□□□□ -0.39
PRKCB-210ENST00000498739 PBDC1Q9BVG4 233 aa12.59□□□□□ -0.39
PRKCB-210ENST00000498739 TMEM231Q9H6L2 316 aa12.59□□□□□ -0.39
PRKCB-210ENST00000498739 VSIRQ9H7M9 311 aa12.59□□□□□ -0.39
PRKCB-210ENST00000498739 IGKV3-7A0A075B6H7 116 aa12.58□□□□□ -0.4
PRKCB-210ENST00000498739 A0A1W2PS18 150 aa12.58□□□□□ -0.4
PRKCB-210ENST00000498739 TSPAN4O14817 238 aa12.58□□□□□ -0.4
PRKCB-210ENST00000498739 DEDDO75618 318 aa12.58□□□□□ -0.4
PRKCB-210ENST00000498739 RLN2P04090 185 aa12.58□□□□□ -0.4
PRKCB-210ENST00000498739 HNRNPCP07910 306 aaKnown RBP eCLIP12.58□□□□□ -0.45e-6■■■□□ 16.3
PRKCB-210ENST00000498739 ARL16Q0P5N6 197 aa12.58□□□□□ -0.4
PRKCB-210ENST00000498739 TCF24Q7RTU0 167 aa12.58□□□□□ -0.4
PRKCB-210ENST00000498739 TMEM144Q7Z5S9 345 aa12.58□□□□□ -0.4
PRKCB-210ENST00000498739 RNF125Q96EQ8 232 aa12.58□□□□□ -0.4
PRKCB-210ENST00000498739 SPAG8Q99932 426 aaPredicted RBP12.58□□□□□ -0.4
PRKCB-210ENST00000498739 LYRM2Q9NU23 88 aaPredicted RBP12.58□□□□□ -0.4
PRKCB-210ENST00000498739 CST7O76096 145 aa12.57□□□□□ -0.4
PRKCB-210ENST00000498739 IGHV4-30-4P0DP06 118 aa12.57□□□□□ -0.4
PRKCB-210ENST00000498739 LYZP61626 148 aa12.57□□□□□ -0.4
PRKCB-210ENST00000498739 LILRB2Q8N423 598 aa12.57□□□□□ -0.4
PRKCB-210ENST00000498739 NPVFQ9HCQ7 196 aa12.57□□□□□ -0.4
PRKCB-210ENST00000498739 RABAC1Q9UI14 185 aa12.57□□□□□ -0.4
PRKCB-210ENST00000498739 PRKDCP78527 4128 aaKnown RBP12.56□□□□□ -0.4
PRKCB-210ENST00000498739 FNDC10F2Z333 226 aa12.56□□□□□ -0.4
PRKCB-210ENST00000498739 DFFBO76075 338 aa12.56□□□□□ -0.4
PRKCB-210ENST00000498739 P2RY1P47900 373 aa12.56□□□□□ -0.4
PRKCB-210ENST00000498739 SLC38A11Q08AI6 406 aa12.56□□□□□ -0.4
PRKCB-210ENST00000498739 FAM90A2PQ658T7 463 aa12.56□□□□□ -0.4
PRKCB-210ENST00000498739 TMEM217Q8N7C4 229 aa12.56□□□□□ -0.4
PRKCB-210ENST00000498739 PPP1R1CQ8WVI7 109 aa12.56□□□□□ -0.4
PRKCB-210ENST00000498739 GRAMD2BQ96HH9 432 aa12.56□□□□□ -0.4
PRKCB-210ENST00000498739 B9D2Q9BPU9 175 aa12.56□□□□□ -0.4
PRKCB-210ENST00000498739 OR5AC2Q9NZP5 309 aa12.56□□□□□ -0.4
PRKCB-210ENST00000498739 IGSF23A1L1A6 192 aa12.55□□□□□ -0.4
PRKCB-210ENST00000498739 OR4C46A6NHA9 309 aa12.55□□□□□ -0.4
PRKCB-210ENST00000498739 E5RGE8 158 aa12.55□□□□□ -0.4
PRKCB-210ENST00000498739 CD5P06127 495 aa12.55□□□□□ -0.4
PRKCB-210ENST00000498739 FRMD6-AS1P0C7T7 363 aa12.55□□□□□ -0.4
PRKCB-210ENST00000498739 GATA2P23769 480 aaPredicted RBP12.55□□□□□ -0.4
PRKCB-210ENST00000498739 TFPI2P48307 235 aa12.55□□□□□ -0.4
PRKCB-210ENST00000498739 EIF2B2P49770 351 aaKnown RBP12.55□□□□□ -0.4
PRKCB-210ENST00000498739 SULT1A1P50225 295 aa12.55□□□□□ -0.4
PRKCB-210ENST00000498739 RPL11P62913 178 aaKnown RBP12.55□□□□□ -0.4
PRKCB-210ENST00000498739 OXA1LQ15070 435 aa12.55□□□□□ -0.4
PRKCB-210ENST00000498739 STX12Q86Y82 276 aa12.55□□□□□ -0.4
PRKCB-210ENST00000498739 GBGT1Q8N5D6 347 aa12.55□□□□□ -0.4
PRKCB-210ENST00000498739 TMEM252Q8N6L7 170 aa12.55□□□□□ -0.4
PRKCB-210ENST00000498739 BPIFCQ8NFQ6 507 aa12.55□□□□□ -0.4
PRKCB-210ENST00000498739 GGACTQ9BVM4 153 aa12.55□□□□□ -0.4
PRKCB-210ENST00000498739 WFDC10AQ9H1F0 79 aa12.55□□□□□ -0.4
PRKCB-210ENST00000498739 MED28Q9H204 178 aa12.55□□□□□ -0.4
PRKCB-210ENST00000498739 U3KQE9 123 aa12.55□□□□□ -0.4
PRKCB-210ENST00000498739 OR11H12B2RN74 326 aa12.54□□□□□ -0.4
PRKCB-210ENST00000498739 H0YIZ8 118 aa12.54□□□□□ -0.4
PRKCB-210ENST00000498739 CFDP00746 253 aaPredicted RBP12.54□□□□□ -0.4
PRKCB-210ENST00000498739 CXCL3P19876 107 aa12.54□□□□□ -0.4
PRKCB-210ENST00000498739 PAFAH1B2P68402 229 aa12.54□□□□□ -0.4
PRKCB-210ENST00000498739 TEPPQ6URK8 271 aa12.54□□□□□ -0.4
PRKCB-210ENST00000498739 TMEM182Q6ZP80 229 aaPredicted RBP12.54□□□□□ -0.4
PRKCB-210ENST00000498739 CYP2G1PQ6ZSU1 146 aa12.54□□□□□ -0.4
PRKCB-210ENST00000498739 DEFB125Q8N687 156 aa12.54□□□□□ -0.4
PRKCB-210ENST00000498739 TUBA4BQ9H853 241 aa12.54□□□□□ -0.4
PRKCB-210ENST00000498739 MPC2O95563 127 aa12.53□□□□□ -0.4
PRKCB-210ENST00000498739 PET100P0DJ07 73 aa12.53□□□□□ -0.4
PRKCB-210ENST00000498739 HBG1P69891 147 aa12.53□□□□□ -0.4
PRKCB-210ENST00000498739 HBG2P69892 147 aa12.53□□□□□ -0.4
PRKCB-210ENST00000498739 FCN2Q15485 313 aa12.53□□□□□ -0.4
PRKCB-210ENST00000498739 C16orf54Q6UWD8 224 aa12.53□□□□□ -0.4
PRKCB-210ENST00000498739 WFDC3Q8IUB2 231 aa12.53□□□□□ -0.4
PRKCB-210ENST00000498739 ASCL2Q99929 193 aa12.53□□□□□ -0.4
PRKCB-210ENST00000498739 C19orf73Q9NVV2 129 aa12.53□□□□□ -0.4
PRKCB-210ENST00000498739 UBQLN2Q9UHD9 624 aa12.53□□□□□ -0.4
PRKCB-210ENST00000498739 PFDN2Q9UHV9 154 aa12.53□□□□□ -0.4
PRKCB-210ENST00000498739 A8MZ25 164 aa12.52□□□□□ -0.41
PRKCB-210ENST00000498739 DNASE2O00115 360 aaPredicted RBP12.52□□□□□ -0.41
PRKCB-210ENST00000498739 BUB3O43684 328 aa12.52□□□□□ -0.41
PRKCB-210ENST00000498739 S100A11P31949 105 aa12.52□□□□□ -0.41
PRKCB-210ENST00000498739 NUP62P37198 522 aaPredicted RBP12.52□□□□□ -0.41
PRKCB-210ENST00000498739 OR11H7Q8NGC8 314 aa12.52□□□□□ -0.41
PRKCB-210ENST00000498739 GLMPQ8WWB7 406 aa12.52□□□□□ -0.41
PRKCB-210ENST00000498739 PPP1R14BQ96C90 147 aa12.52□□□□□ -0.41
PRKCB-210ENST00000498739 SLC25A31Q9H0C2 315 aa12.52□□□□□ -0.41
PRKCB-210ENST00000498739 MS4A6AQ9H2W1 248 aa12.52□□□□□ -0.41
PRKCB-210ENST00000498739 SRD5A3Q9H8P0 318 aa12.52□□□□□ -0.41
PRKCB-210ENST00000498739 UQCC1Q9NVA1 299 aa12.52□□□□□ -0.41
PRKCB-210ENST00000498739 SORL1Q92673 2214 aa12.52□□□□□ -0.41
PRKCB-210ENST00000498739 HELTA6NFD8 242 aa12.51□□□□□ -0.41
PRKCB-210ENST00000498739 ORM2P19652 201 aa12.51□□□□□ -0.41
PRKCB-210ENST00000498739 SELENOTP62341 195 aa12.51□□□□□ -0.41
PRKCB-210ENST00000498739 EWSR1Q01844 656 aaKnown RBP eCLIP12.51□□□□□ -0.41
PRKCB-210ENST00000498739 STXBP6Q8NFX7 210 aa12.51□□□□□ -0.41
PRKCB-210ENST00000498739 OR1B1Q8NGR6 318 aa12.51□□□□□ -0.41
PRKCB-210ENST00000498739 RNF126Q9BV68 326 aa12.51□□□□□ -0.41
PRKCB-210ENST00000498739 TMEM147Q9BVK8 224 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms