RNA–Protein interactions for RNA: ENST00000498020.1

HLA-DMB-262, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 4,569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-262ENST00000498020 TFF3Q07654 80 aa6.56□□□□□ -1.36
HLA-DMB-262ENST00000498020 TWIST1Q15672 202 aa6.56□□□□□ -1.36
HLA-DMB-262ENST00000498020 ZNF502Q8TBZ5 544 aa6.56□□□□□ -1.36
HLA-DMB-262ENST00000498020 Q8TCH9 128 aa6.56□□□□□ -1.36
HLA-DMB-262ENST00000498020 ZFP30Q9Y2G7 519 aa6.56□□□□□ -1.36
HLA-DMB-262ENST00000498020 KMT2EQ8IZD2 1858 aa6.56□□□□□ -1.36
HLA-DMB-262ENST00000498020 COLCA2A8K830 154 aa6.56□□□□□ -1.36
HLA-DMB-262ENST00000498020 CKS2P33552 79 aa6.56□□□□□ -1.36
HLA-DMB-262ENST00000498020 CD81P60033 236 aa6.56□□□□□ -1.36
HLA-DMB-262ENST00000498020 RPS20P60866 119 aaKnown RBP6.56□□□□□ -1.36
HLA-DMB-262ENST00000498020 SLC16A13Q7RTY0 426 aa6.56□□□□□ -1.36
HLA-DMB-262ENST00000498020 Q8NA96 180 aa6.56□□□□□ -1.36
HLA-DMB-262ENST00000498020 GATAD1Q8WUU5 269 aa6.56□□□□□ -1.36
HLA-DMB-262ENST00000498020 DPH3Q96FX2 82 aa6.56□□□□□ -1.36
HLA-DMB-262ENST00000498020 IFI27L2Q9H2X8 130 aa6.56□□□□□ -1.36
HLA-DMB-262ENST00000498020 MED12LQ86YW9 2145 aa6.56□□□□□ -1.36
HLA-DMB-262ENST00000498020 SOD3P08294 240 aa6.56□□□□□ -1.36
HLA-DMB-262ENST00000498020 TMEM249Q2WGJ8 235 aa6.56□□□□□ -1.36
HLA-DMB-262ENST00000498020 GAFA1Q96PS6 74 aa6.56□□□□□ -1.36
HLA-DMB-262ENST00000498020 TBX15Q96SF7 602 aa6.56□□□□□ -1.36
HLA-DMB-262ENST00000498020 VSIRQ9H7M9 311 aa6.56□□□□□ -1.36
HLA-DMB-262ENST00000498020 PHLDA3Q9Y5J5 127 aa6.56□□□□□ -1.36
HLA-DMB-262ENST00000498020 M0QZK8 103 aa6.55□□□□□ -1.36
HLA-DMB-262ENST00000498020 GGCTO75223 188 aaKnown RBP6.55□□□□□ -1.36
HLA-DMB-262ENST00000498020 ZNF324O75467 553 aaPredicted RBP6.55□□□□□ -1.36
HLA-DMB-262ENST00000498020 EIF3GO75821 320 aaKnown RBP eCLIP6.55□□□□□ -1.36
HLA-DMB-262ENST00000498020 NPPCP23582 126 aa6.55□□□□□ -1.36
HLA-DMB-262ENST00000498020 ADIPOQQ15848 244 aa6.55□□□□□ -1.36
HLA-DMB-262ENST00000498020 FAM53AQ6NSI3 398 aaPredicted RBP6.55□□□□□ -1.36
HLA-DMB-262ENST00000498020 CHD3Q12873 2000 aaKnown RBP6.55□□□□□ -1.36
HLA-DMB-262ENST00000498020 ZNF207O43670 478 aaKnown RBP6.55□□□□□ -1.36
HLA-DMB-262ENST00000498020 DPM3Q9P2X0 92 aa6.55□□□□□ -1.36
HLA-DMB-262ENST00000498020 UPK2O00526 184 aa6.55□□□□□ -1.36
HLA-DMB-262ENST00000498020 FOLR2P14207 255 aa6.55□□□□□ -1.36
HLA-DMB-262ENST00000498020 LINC00205P59089 165 aa6.55□□□□□ -1.36
HLA-DMB-262ENST00000498020 RELQ04864 619 aaPredicted RBP6.55□□□□□ -1.36
HLA-DMB-262ENST00000498020 ATP5G2Q06055 141 aa6.55□□□□□ -1.36
HLA-DMB-262ENST00000498020 C2orf83Q53S99 150 aa6.55□□□□□ -1.36
HLA-DMB-262ENST00000498020 CYP2G1PQ6ZSU1 146 aa6.55□□□□□ -1.36
HLA-DMB-262ENST00000498020 ZNF329Q86UD4 541 aa6.55□□□□□ -1.36
HLA-DMB-262ENST00000498020 RPP25LQ8N5L8 163 aaKnown RBP6.55□□□□□ -1.36
HLA-DMB-262ENST00000498020 ELOVL1Q9BW60 279 aa6.55□□□□□ -1.36
HLA-DMB-262ENST00000498020 DIRC3C9JPN6 131 aa6.55□□□□□ -1.36
HLA-DMB-262ENST00000498020 CA2P00918 260 aa6.55□□□□□ -1.36
HLA-DMB-262ENST00000498020 IGLV2-14P01704 120 aa6.55□□□□□ -1.36
HLA-DMB-262ENST00000498020 CCL3L1P16619 93 aa6.55□□□□□ -1.36
HLA-DMB-262ENST00000498020 PSG9Q00887 426 aa6.55□□□□□ -1.36
HLA-DMB-262ENST00000498020 FXYD3Q14802 87 aa6.55□□□□□ -1.36
HLA-DMB-262ENST00000498020 HEPN1Q6WQI6 88 aa6.55□□□□□ -1.36
HLA-DMB-262ENST00000498020 VN1R17PQ8TDU5 208 aa6.55□□□□□ -1.36
HLA-DMB-262ENST00000498020 ATG101Q9BSB4 218 aa6.55□□□□□ -1.36
HLA-DMB-262ENST00000498020 AGMATQ9BSE5 352 aa6.55□□□□□ -1.36
HLA-DMB-262ENST00000498020 SDF2L1Q9HCN8 221 aa6.55□□□□□ -1.36
HLA-DMB-262ENST00000498020 PAM16Q9Y3D7 125 aa6.55□□□□□ -1.36
HLA-DMB-262ENST00000498020 IGHV3OR16-13A0A075B7E8 117 aa6.54□□□□□ -1.36
HLA-DMB-262ENST00000498020 IGHV3-74A0A0B4J1X5 117 aa6.54□□□□□ -1.36
HLA-DMB-262ENST00000498020 C19orf84I3L1E1 186 aa6.54□□□□□ -1.36
HLA-DMB-262ENST00000498020 GCGP01275 180 aa6.54□□□□□ -1.36
HLA-DMB-262ENST00000498020 COX6CP09669 75 aa6.54□□□□□ -1.36
HLA-DMB-262ENST00000498020 BTF3P20290 206 aaKnown RBP6.54□□□□□ -1.36
HLA-DMB-262ENST00000498020 PARLQ9H300 379 aa6.54□□□□□ -1.36
HLA-DMB-262ENST00000498020 RNF114Q9Y508 228 aa6.54□□□□□ -1.36
HLA-DMB-262ENST00000498020 LOC389332A0A1B0GUA5 103 aa6.54□□□□□ -1.36
HLA-DMB-262ENST00000498020 TMEM238LA0A1B0GVL6 79 aa6.54□□□□□ -1.36
HLA-DMB-262ENST00000498020 A6NJY4 79 aa6.54□□□□□ -1.36
HLA-DMB-262ENST00000498020 C15orf62A8K5M9 175 aa6.54□□□□□ -1.36
HLA-DMB-262ENST00000498020 TMEM178BH3BS89 294 aa6.54□□□□□ -1.36
HLA-DMB-262ENST00000498020 ZFP36P26651 326 aaKnown RBP6.54□□□□□ -1.36
HLA-DMB-262ENST00000498020 HAPLN4Q86UW8 402 aa6.54□□□□□ -1.36
HLA-DMB-262ENST00000498020 NPIPB3Q92617 1050 aa6.54□□□□□ -1.36
HLA-DMB-262ENST00000498020 EEF1AKMT3Q96AZ1 226 aa6.54□□□□□ -1.36
HLA-DMB-262ENST00000498020 SMIM12Q96EX1 92 aa6.54□□□□□ -1.36
HLA-DMB-262ENST00000498020 OR51M1Q9H341 326 aa6.54□□□□□ -1.36
HLA-DMB-262ENST00000498020 FOXA2Q9Y261 457 aaPredicted RBP6.54□□□□□ -1.36
HLA-DMB-262ENST00000498020 FAM181BA6NEQ2 426 aa6.54□□□□□ -1.36
HLA-DMB-262ENST00000498020 ZNF98A6NK75 572 aa6.54□□□□□ -1.36
HLA-DMB-262ENST00000498020 NDUFS8O00217 210 aa6.54□□□□□ -1.36
HLA-DMB-262ENST00000498020 UBE2L6O14933 153 aa6.54□□□□□ -1.36
HLA-DMB-262ENST00000498020 LHBP01229 141 aa6.54□□□□□ -1.36
HLA-DMB-262ENST00000498020 TRGC1P0CF51 173 aa6.54□□□□□ -1.36
HLA-DMB-262ENST00000498020 SNRPD3P62318 126 aaKnown RBP6.54□□□□□ -1.36
HLA-DMB-262ENST00000498020 SRSF2Q01130 221 aaKnown RBP6.54□□□□□ -1.36
HLA-DMB-262ENST00000498020 TMEM177Q53S58 311 aa6.54□□□□□ -1.36
HLA-DMB-262ENST00000498020 TCF24Q7RTU0 167 aa6.54□□□□□ -1.36
HLA-DMB-262ENST00000498020 TMEM70Q9BUB7 260 aa6.54□□□□□ -1.36
HLA-DMB-262ENST00000498020 CHD6Q8TD26 2715 aa6.54□□□□□ -1.36
HLA-DMB-262ENST00000498020 STAB1Q9NY15 2570 aa6.54□□□□□ -1.36
HLA-DMB-262ENST00000498020 CGB1A6NKQ9 187 aa6.54□□□□□ -1.36
HLA-DMB-262ENST00000498020 EMP1P54849 157 aa6.54□□□□□ -1.36
HLA-DMB-262ENST00000498020 CX3CL1P78423 397 aa6.54□□□□□ -1.36
HLA-DMB-262ENST00000498020 C17orf58Q2M2W7 97 aa6.54□□□□□ -1.36
HLA-DMB-262ENST00000498020 MRPL20Q9BYC9 149 aaKnown RBP6.54□□□□□ -1.36
HLA-DMB-262ENST00000498020 ZNF257Q9Y2Q1 563 aa6.54□□□□□ -1.36
HLA-DMB-262ENST00000498020 NCKAP5O14513 1909 aa6.53□□□□□ -1.36
HLA-DMB-262ENST00000498020 IGHV4-30-2A0A087WSY4 118 aa6.53□□□□□ -1.36
HLA-DMB-262ENST00000498020 RRHO14718 337 aa6.53□□□□□ -1.36
HLA-DMB-262ENST00000498020 SAP30O75446 220 aa6.53□□□□□ -1.36
HLA-DMB-262ENST00000498020 GPX1P07203 203 aa6.53□□□□□ -1.36
HLA-DMB-262ENST00000498020 NMUP48645 174 aa6.53□□□□□ -1.36
HLA-DMB-262ENST00000498020 PAPPA-AS1Q5QFB9 102 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms