RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 FAM96AQ9H5X1 160 aa2.49□□□□□ -2.01
EXOSC3-208ENST00000496910 SPANXA1Q9NS26 97 aa2.49□□□□□ -2.01
EXOSC3-208ENST00000496910 TMEM38BQ9NVV0 291 aa2.49□□□□□ -2.01
EXOSC3-208ENST00000496910 NUFIP1Q9UHK0 495 aaKnown RBP2.49□□□□□ -2.01
EXOSC3-208ENST00000496910 CYSLTR1Q9Y271 337 aa2.49□□□□□ -2.01
EXOSC3-208ENST00000496910 NEBP20929 6669 aa2.49□□□□□ -2.01
EXOSC3-208ENST00000496910 ZNF638Q14966 1978 aaKnown RBP2.49□□□□□ -2.01
EXOSC3-208ENST00000496910 IGKV1-12A0A0C4DH73 117 aa2.48□□□□□ -2.01
EXOSC3-208ENST00000496910 IGHV1-69-2A0A0G2JMI3 117 aa2.48□□□□□ -2.01
EXOSC3-208ENST00000496910 KLF18A0A0U1RQI7 1052 aa2.48□□□□□ -2.01
EXOSC3-208ENST00000496910 E7EQ34 232 aa2.48□□□□□ -2.01
EXOSC3-208ENST00000496910 K7EP13 123 aa2.48□□□□□ -2.01
EXOSC3-208ENST00000496910 CHST10O43529 356 aa2.48□□□□□ -2.01
EXOSC3-208ENST00000496910 CST8O60676 142 aa2.48□□□□□ -2.01
EXOSC3-208ENST00000496910 EIF1BO60739 113 aaKnown RBP2.48□□□□□ -2.01
EXOSC3-208ENST00000496910 POP7O75817 140 aaKnown RBP2.48□□□□□ -2.01
EXOSC3-208ENST00000496910 SLC25A14O95258 325 aaPredicted RBP2.48□□□□□ -2.01
EXOSC3-208ENST00000496910 PDYNP01213 254 aa2.48□□□□□ -2.01
EXOSC3-208ENST00000496910 IGKV1D-12P01611 117 aa2.48□□□□□ -2.01
EXOSC3-208ENST00000496910 C8GP07360 202 aa2.48□□□□□ -2.01
EXOSC3-208ENST00000496910 BPGMP07738 259 aa2.48□□□□□ -2.01
EXOSC3-208ENST00000496910 HTR1AP08908 422 aa2.48□□□□□ -2.01
EXOSC3-208ENST00000496910 RPL7P18124 248 aaKnown RBP2.48□□□□□ -2.01
EXOSC3-208ENST00000496910 BLVRBP30043 206 aaPredicted RBP2.48□□□□□ -2.01
EXOSC3-208ENST00000496910 TGFBR1P36897 503 aa2.48□□□□□ -2.01
EXOSC3-208ENST00000496910 EIF1P41567 113 aaKnown RBP2.48□□□□□ -2.01
EXOSC3-208ENST00000496910 CA7P43166 264 aa2.48□□□□□ -2.01
EXOSC3-208ENST00000496910 ATP5G3P48201 142 aa2.48□□□□□ -2.01
EXOSC3-208ENST00000496910 ATP5G2Q06055 141 aa2.48□□□□□ -2.01
EXOSC3-208ENST00000496910 RHEBQ15382 184 aa2.48□□□□□ -2.01
EXOSC3-208ENST00000496910 CST6Q15828 149 aa2.48□□□□□ -2.01
EXOSC3-208ENST00000496910 PLPPR5Q32ZL2 321 aa2.48□□□□□ -2.01
EXOSC3-208ENST00000496910 C9orf129Q5T035 196 aaKnown RBP2.48□□□□□ -2.01
EXOSC3-208ENST00000496910 LCE3CQ5T5A8 94 aa2.48□□□□□ -2.01
EXOSC3-208ENST00000496910 MORN3Q6PF18 240 aaPredicted RBP2.48□□□□□ -2.01
EXOSC3-208ENST00000496910 BAP18Q8IXM2 172 aa2.48□□□□□ -2.01
EXOSC3-208ENST00000496910 ORMDL3Q8N138 153 aa2.48□□□□□ -2.01
EXOSC3-208ENST00000496910 Q8N7P7 452 aa2.48□□□□□ -2.01
EXOSC3-208ENST00000496910 OR4D11Q8NGI4 311 aa2.48□□□□□ -2.01
EXOSC3-208ENST00000496910 PLEKHB2Q96CS7 222 aa2.48□□□□□ -2.01
EXOSC3-208ENST00000496910 L3HYPDHQ96EM0 354 aa2.48□□□□□ -2.01
EXOSC3-208ENST00000496910 PDXPQ96GD0 296 aa2.48□□□□□ -2.01
EXOSC3-208ENST00000496910 OR2A5Q96R48 311 aa2.48□□□□□ -2.01
EXOSC3-208ENST00000496910 CCL13Q99616 98 aa2.48□□□□□ -2.01
EXOSC3-208ENST00000496910 CCDC32Q9BV29 185 aa2.48□□□□□ -2.01
EXOSC3-208ENST00000496910 CHST6Q9GZX3 395 aa2.48□□□□□ -2.01
EXOSC3-208ENST00000496910 RPP21Q9H633 154 aaKnown RBP2.48□□□□□ -2.01
EXOSC3-208ENST00000496910 TPT1P8Q9HAU6 139 aa2.48□□□□□ -2.01
EXOSC3-208ENST00000496910 ASF1BQ9NVP2 202 aa2.48□□□□□ -2.01
EXOSC3-208ENST00000496910 TAAR3PQ9P1P4 343 aa2.48□□□□□ -2.01
EXOSC3-208ENST00000496910 DNAJC12Q9UKB3 198 aa2.48□□□□□ -2.01
EXOSC3-208ENST00000496910 MRPS16Q9Y3D3 137 aaKnown RBP2.48□□□□□ -2.01
EXOSC3-208ENST00000496910 CSAG2Q9Y5P2 127 aa2.48□□□□□ -2.01
EXOSC3-208ENST00000496910 SSPOA2VEC9 5147 aa2.47□□□□□ -2.01
EXOSC3-208ENST00000496910 MYO18AQ92614 2054 aaKnown RBP2.47□□□□□ -2.01
EXOSC3-208ENST00000496910 TRAV4A0A0B4J268 109 aa2.47□□□□□ -2.01
EXOSC3-208ENST00000496910 IGHV7-4-1A0A0J9YVY3 117 aa2.47□□□□□ -2.01
EXOSC3-208ENST00000496910 CLDN25C9JDP6 229 aa2.47□□□□□ -2.01
EXOSC3-208ENST00000496910 COX7A2LO14548 114 aa2.47□□□□□ -2.01
EXOSC3-208ENST00000496910 DEGS1O15121 323 aa2.47□□□□□ -2.01
EXOSC3-208ENST00000496910 NDUFC2O95298 119 aa2.47□□□□□ -2.01
EXOSC3-208ENST00000496910 APOC1P02654 83 aa2.47□□□□□ -2.01
EXOSC3-208ENST00000496910 C1QCP02747 245 aa2.47□□□□□ -2.01
EXOSC3-208ENST00000496910 GYPCP04921 128 aa2.47□□□□□ -2.01
EXOSC3-208ENST00000496910 SMIM17P0DL12 118 aa2.47□□□□□ -2.01
EXOSC3-208ENST00000496910 IGHV1-8P0DP01 117 aa2.47□□□□□ -2.01
EXOSC3-208ENST00000496910 ZNF823P16415 610 aa2.47□□□□□ -2.01
EXOSC3-208ENST00000496910 RPS3P23396 243 aaKnown RBP eCLIP2.47□□□□□ -2.01
EXOSC3-208ENST00000496910 NUDT1P36639 197 aa2.47□□□□□ -2.01
EXOSC3-208ENST00000496910 EMP1P54849 157 aa2.47□□□□□ -2.01
EXOSC3-208ENST00000496910 DSCR10P59022 87 aa2.47□□□□□ -2.01
EXOSC3-208ENST00000496910 TBPL1P62380 186 aa2.47□□□□□ -2.01
EXOSC3-208ENST00000496910 KRTAP20-1Q3LI63 56 aa2.47□□□□□ -2.01
EXOSC3-208ENST00000496910 LUZP6Q538Z0 58 aa2.47□□□□□ -2.01
EXOSC3-208ENST00000496910 TNFAIP8L3Q5GJ75 292 aa2.47□□□□□ -2.01
EXOSC3-208ENST00000496910 FAM78AQ5JUQ0 283 aa2.47□□□□□ -2.01
EXOSC3-208ENST00000496910 NTM-AS1Q6ZSK4 140 aa2.47□□□□□ -2.01
EXOSC3-208ENST00000496910 ANGPTL5Q86XS5 388 aa2.47□□□□□ -2.01
EXOSC3-208ENST00000496910 OR13C8Q8NGS7 320 aa2.47□□□□□ -2.01
EXOSC3-208ENST00000496910 OR4A5Q8NH83 315 aa2.47□□□□□ -2.01
EXOSC3-208ENST00000496910 SLC25A40Q8TBP6 338 aa2.47□□□□□ -2.01
EXOSC3-208ENST00000496910 ZNF675Q8TD23 568 aa2.47□□□□□ -2.01
EXOSC3-208ENST00000496910 GPR119Q8TDV5 335 aa2.47□□□□□ -2.01
EXOSC3-208ENST00000496910 LMX1AQ8TE12 382 aa2.47□□□□□ -2.01
EXOSC3-208ENST00000496910 C2orf15Q8WU43 125 aaKnown RBP2.47□□□□□ -2.01
EXOSC3-208ENST00000496910 THEM6Q8WUY1 208 aa2.47□□□□□ -2.01
EXOSC3-208ENST00000496910 OR5P3Q8WZ94 311 aa2.47□□□□□ -2.01
EXOSC3-208ENST00000496910 MS4A6EQ96DS6 147 aa2.47□□□□□ -2.01
EXOSC3-208ENST00000496910 CAPZA3Q96KX2 299 aa2.47□□□□□ -2.01
EXOSC3-208ENST00000496910 IP6K3Q96PC2 410 aa2.47□□□□□ -2.01
EXOSC3-208ENST00000496910 ZNF382Q96SR6 550 aa2.47□□□□□ -2.01
EXOSC3-208ENST00000496910 NMNAT3Q96T66 252 aa2.47□□□□□ -2.01
EXOSC3-208ENST00000496910 HSPB9Q9BQS6 159 aa2.47□□□□□ -2.01
EXOSC3-208ENST00000496910 C11orf68Q9H3H3 251 aaKnown RBP2.47□□□□□ -2.01
EXOSC3-208ENST00000496910 HUWE1Q7Z6Z7 4374 aaKnown RBP2.47□□□□□ -2.01
EXOSC3-208ENST00000496910 ROCK2O75116 1388 aaKnown RBP2.47□□□□□ -2.01
EXOSC3-208ENST00000496910 DNAH9Q9NYC9 4486 aa2.46□□□□□ -2.01
EXOSC3-208ENST00000496910 IGLV11-55A0A075B6I3 123 aa2.46□□□□□ -2.02
EXOSC3-208ENST00000496910 A0A0J9YY10 115 aa2.46□□□□□ -2.02
EXOSC3-208ENST00000496910 A0A1B0GX78 115 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms