RNA–Protein interactions for RNA: ENST00000496686.1

COL15A1-204, Transcript of collagen type XV alpha 1 chain, humanhuman

TSL 3

Gene COL15A1, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-204ENST00000496686 TMEM88Q6PEY1 159 aa11.94□□□□□ -0.5
COL15A1-204ENST00000496686 TEX29Q8N6K0 151 aa11.94□□□□□ -0.5
COL15A1-204ENST00000496686 C15orf54Q8N8G6 183 aa11.94□□□□□ -0.5
COL15A1-204ENST00000496686 RPUSD4Q96CM3 377 aaKnown RBP11.94□□□□□ -0.5
COL15A1-204ENST00000496686 TCEAL7Q9BRU2 100 aa11.94□□□□□ -0.5
COL15A1-204ENST00000496686 PAXXQ9BUH6 204 aa11.94□□□□□ -0.5
COL15A1-204ENST00000496686 C20orf24Q9BUV8 137 aa11.94□□□□□ -0.5
COL15A1-204ENST00000496686 OR51M1Q9H341 326 aa11.94□□□□□ -0.5
COL15A1-204ENST00000496686 MRPL27Q9P0M9 148 aaKnown RBP11.94□□□□□ -0.5
COL15A1-204ENST00000496686 FBXL7Q9UJT9 491 aa11.94□□□□□ -0.5
COL15A1-204ENST00000496686 ZNF580Q9UK33 172 aa11.94□□□□□ -0.5
COL15A1-204ENST00000496686 F8W735 103 aaPredicted RBP11.93□□□□□ -0.5
COL15A1-204ENST00000496686 OR2C1O95371 312 aa11.93□□□□□ -0.5
COL15A1-204ENST00000496686 NPPCP23582 126 aa11.93□□□□□ -0.5
COL15A1-204ENST00000496686 Q56UQ5 140 aa11.93□□□□□ -0.5
COL15A1-204ENST00000496686 MORN5Q5VZ52 161 aa11.93□□□□□ -0.5
COL15A1-204ENST00000496686 NECAP1Q8NC96 275 aa11.93□□□□□ -0.5
COL15A1-204ENST00000496686 OR5R1Q8NH85 324 aa11.93□□□□□ -0.5
COL15A1-204ENST00000496686 GSX1Q9H4S2 264 aaPredicted RBP11.93□□□□□ -0.5
COL15A1-204ENST00000496686 TMEM14CQ9P0S9 112 aa11.93□□□□□ -0.5
COL15A1-204ENST00000496686 SPG11Q96JI7 2443 aa11.93□□□□□ -0.5
COL15A1-204ENST00000496686 TRAV5A0A0B4J249 113 aa11.92□□□□□ -0.5
COL15A1-204ENST00000496686 TRAV41A0A0B4J266 112 aa11.92□□□□□ -0.5
COL15A1-204ENST00000496686 WI2-2373I1.2A0A1W2PRP0 233 aa11.92□□□□□ -0.5
COL15A1-204ENST00000496686 CXorf65A6NEN9 183 aa11.92□□□□□ -0.5
COL15A1-204ENST00000496686 H3BUA1 57 aa11.92□□□□□ -0.5
COL15A1-204ENST00000496686 NUPL2O15504 423 aaKnown RBP11.92□□□□□ -0.5
COL15A1-204ENST00000496686 IGHG2P01859 326 aa11.92□□□□□ -0.5
COL15A1-204ENST00000496686 LYZP61626 148 aa11.92□□□□□ -0.5
COL15A1-204ENST00000496686 ZNF674Q2M3X9 581 aa11.92□□□□□ -0.5
COL15A1-204ENST00000496686 ZNF502Q8TBZ5 544 aa11.92□□□□□ -0.5
COL15A1-204ENST00000496686 Q8WTZ3 238 aa11.92□□□□□ -0.5
COL15A1-204ENST00000496686 FXYD5Q96DB9 178 aa11.92□□□□□ -0.5
COL15A1-204ENST00000496686 CTDSP1Q9GZU7 261 aa11.92□□□□□ -0.5
COL15A1-204ENST00000496686 TMEM242Q9NWH2 141 aa11.92□□□□□ -0.5
COL15A1-204ENST00000496686 RNF24Q9Y225 148 aa11.92□□□□□ -0.5
COL15A1-204ENST00000496686 FAM223BA6NKX1 122 aa11.91□□□□□ -0.5
COL15A1-204ENST00000496686 TSPAN4O14817 238 aa11.91□□□□□ -0.5
COL15A1-204ENST00000496686 S100A7P31151 101 aa11.91□□□□□ -0.5
COL15A1-204ENST00000496686 RHOGP84095 191 aa11.91□□□□□ -0.5
COL15A1-204ENST00000496686 LY6EQ16553 131 aa11.91□□□□□ -0.5
COL15A1-204ENST00000496686 DEFB112Q30KQ8 113 aa11.91□□□□□ -0.5
COL15A1-204ENST00000496686 FAM223AQ8IWN6 122 aa11.91□□□□□ -0.5
COL15A1-204ENST00000496686 ZNF491Q8N8L2 437 aa11.91□□□□□ -0.5
COL15A1-204ENST00000496686 MAPK1IP1LQ8NDC0 245 aa11.91□□□□□ -0.5
COL15A1-204ENST00000496686 RNF125Q96EQ8 232 aa11.91□□□□□ -0.5
COL15A1-204ENST00000496686 SLC25A39Q9BZJ4 359 aaPredicted RBP11.91□□□□□ -0.5
COL15A1-204ENST00000496686 TMA7Q9Y2S6 64 aaKnown RBP11.91□□□□□ -0.5
COL15A1-204ENST00000496686 SOX21Q9Y651 276 aaPredicted RBP11.91□□□□□ -0.5
COL15A1-204ENST00000496686 USP9YO00507 2555 aaPredicted RBP11.91□□□□□ -0.5
COL15A1-204ENST00000496686 FBN2P35556 2912 aa11.9□□□□□ -0.5
COL15A1-204ENST00000496686 SCO2A0A1W2PP80 73 aa11.9□□□□□ -0.5
COL15A1-204ENST00000496686 C9JCJ5 164 aa11.9□□□□□ -0.5
COL15A1-204ENST00000496686 H3BRN7 92 aa11.9□□□□□ -0.5
COL15A1-204ENST00000496686 NDUFB4O95168 129 aa11.9□□□□□ -0.5
COL15A1-204ENST00000496686 OR10J4P0C629 311 aa11.9□□□□□ -0.5
COL15A1-204ENST00000496686 GP9P14770 177 aa11.9□□□□□ -0.5
COL15A1-204ENST00000496686 AKR1C3P42330 323 aa11.9□□□□□ -0.5
COL15A1-204ENST00000496686 RPL23P62829 140 aaKnown RBP11.9□□□□□ -0.5
COL15A1-204ENST00000496686 KIAA0141Q14154 515 aaPredicted RBP11.9□□□□□ -0.5
COL15A1-204ENST00000496686 EEF1AKMT3Q96AZ1 226 aa11.9□□□□□ -0.5
COL15A1-204ENST00000496686 SHANK2-AS3Q9BTD1 123 aa11.9□□□□□ -0.5
COL15A1-204ENST00000496686 LY96Q9Y6Y9 160 aa11.9□□□□□ -0.5
COL15A1-204ENST00000496686 TRBV7-1A0A0A6YYK4 115 aa11.89□□□□□ -0.51
COL15A1-204ENST00000496686 SH2D7A6NKC9 451 aaPredicted RBP11.89□□□□□ -0.51
COL15A1-204ENST00000496686 LINC01548A6NM66 108 aa11.89□□□□□ -0.51
COL15A1-204ENST00000496686 G3V318 75 aa11.89□□□□□ -0.51
COL15A1-204ENST00000496686 C15orf32Q32M92 178 aa11.89□□□□□ -0.51
COL15A1-204ENST00000496686 ZNF343Q6P1L6 599 aa11.89□□□□□ -0.51
COL15A1-204ENST00000496686 FOXC2Q99958 501 aa11.89□□□□□ -0.51
COL15A1-204ENST00000496686 PRDM13Q9H4Q3 707 aa11.89□□□□□ -0.51
COL15A1-204ENST00000496686 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.89□□□□□ -0.51
COL15A1-204ENST00000496686 COLCA2A8K830 154 aa11.88□□□□□ -0.51
COL15A1-204ENST00000496686 GGTLC3B5MD39 225 aa11.88□□□□□ -0.51
COL15A1-204ENST00000496686 AP4M1O00189 453 aa11.88□□□□□ -0.51
COL15A1-204ENST00000496686 MT-ND4LP03901 98 aa11.88□□□□□ -0.51
COL15A1-204ENST00000496686 IL4P05112 153 aa11.88□□□□□ -0.51
COL15A1-204ENST00000496686 CTSGP08311 255 aa11.88□□□□□ -0.51
COL15A1-204ENST00000496686 PYYP10082 97 aa11.88□□□□□ -0.51
COL15A1-204ENST00000496686 IER3P46695 156 aa11.88□□□□□ -0.51
COL15A1-204ENST00000496686 ADIRFQ15847 76 aa11.88□□□□□ -0.51
COL15A1-204ENST00000496686 C9orf152Q5JTZ5 239 aa11.88□□□□□ -0.51
COL15A1-204ENST00000496686 ZNF600Q6ZNG1 722 aa11.88□□□□□ -0.51
COL15A1-204ENST00000496686 MDFIC2A0A1B0GVS7 189 aa11.87□□□□□ -0.51
COL15A1-204ENST00000496686 HIST1H1EP10412 219 aaKnown RBP11.87□□□□□ -0.51
COL15A1-204ENST00000496686 CD99P14209 185 aa11.87□□□□□ -0.51
COL15A1-204ENST00000496686 MYCNOSP40205 109 aa11.87□□□□□ -0.51
COL15A1-204ENST00000496686 ATP5G2Q06055 141 aa11.87□□□□□ -0.51
COL15A1-204ENST00000496686 Q6YL49 198 aa11.87□□□□□ -0.51
COL15A1-204ENST00000496686 BCL6BQ8N143 479 aaPredicted RBP11.87□□□□□ -0.51
COL15A1-204ENST00000496686 ANAPC16Q96DE5 110 aa11.87□□□□□ -0.51
COL15A1-204ENST00000496686 YPEL4Q96NS1 127 aa11.87□□□□□ -0.51
COL15A1-204ENST00000496686 S4R3C0 116 aa11.87□□□□□ -0.51
COL15A1-204ENST00000496686 PTPN13Q12923 2485 aa11.87□□□□□ -0.51
COL15A1-204ENST00000496686 CHD6Q8TD26 2715 aa11.87□□□□□ -0.51
COL15A1-204ENST00000496686 PRRC2AP48634 2157 aaKnown RBP11.86□□□□□ -0.51
COL15A1-204ENST00000496686 ANKRD17O75179 2603 aaKnown RBP11.86□□□□□ -0.51
COL15A1-204ENST00000496686 OR2T8A6NH00 312 aa11.86□□□□□ -0.51
COL15A1-204ENST00000496686 CLDN34H7C241 214 aa11.86□□□□□ -0.51
COL15A1-204ENST00000496686 IGHV4-59P01825 116 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms