RNA–Protein interactions for RNA: ENST00000496427.5

CHCHD3-206, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5

Gene CHCHD3, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-206ENST00000496427 ATG101Q9BSB4 218 aa4.88□□□□□ -1.63
CHCHD3-206ENST00000496427 SLC35B3Q9H1N7 401 aa4.88□□□□□ -1.63
CHCHD3-206ENST00000496427 DIABLOQ9NR28 239 aa4.88□□□□□ -1.63
CHCHD3-206ENST00000496427 SSR3Q9UNL2 185 aa4.88□□□□□ -1.63
CHCHD3-206ENST00000496427 TMED3Q9Y3Q3 217 aa4.88□□□□□ -1.63
CHCHD3-206ENST00000496427 YTHDF2Q9Y5A9 579 aaKnown RBP4.88□□□□□ -1.63
CHCHD3-206ENST00000496427 RFNGQ9Y644 331 aa4.88□□□□□ -1.63
CHCHD3-206ENST00000496427 HLA-DRB4X5D2U9 266 aa4.88□□□□□ -1.63
CHCHD3-206ENST00000496427 A0A0A6YYH2 397 aa4.87□□□□□ -1.63
CHCHD3-206ENST00000496427 LOC100506127A0A0U1RQW1 187 aa4.87□□□□□ -1.63
CHCHD3-206ENST00000496427 NBDYA0A0U1RRE5 68 aa4.87□□□□□ -1.63
CHCHD3-206ENST00000496427 LOC102723971A0A1B0GUV8 181 aa4.87□□□□□ -1.63
CHCHD3-206ENST00000496427 A6NJ64 397 aa4.87□□□□□ -1.63
CHCHD3-206ENST00000496427 B3GALNT1O75752 331 aa4.87□□□□□ -1.63
CHCHD3-206ENST00000496427 PRM2P04554 102 aa4.87□□□□□ -1.63
CHCHD3-206ENST00000496427 ETV6P41212 452 aa4.87□□□□□ -1.63
CHCHD3-206ENST00000496427 HSPA13P48723 471 aa4.87□□□□□ -1.63
CHCHD3-206ENST00000496427 RND2P52198 227 aa4.87□□□□□ -1.63
CHCHD3-206ENST00000496427 AKR1C2P52895 323 aa4.87□□□□□ -1.63
CHCHD3-206ENST00000496427 TAS2R46P59540 309 aa4.87□□□□□ -1.63
CHCHD3-206ENST00000496427 DAD1P61803 113 aa4.87□□□□□ -1.63
CHCHD3-206ENST00000496427 NUTF2P61970 127 aaKnown RBP4.87□□□□□ -1.63
CHCHD3-206ENST00000496427 SNRPD3P62318 126 aaKnown RBP4.87□□□□□ -1.63
CHCHD3-206ENST00000496427 KCTD21Q4G0X4 260 aa4.87□□□□□ -1.63
CHCHD3-206ENST00000496427 SIGLEC15Q6ZMC9 328 aa4.87□□□□□ -1.63
CHCHD3-206ENST00000496427 ZNF709Q8N972 641 aa4.87□□□□□ -1.63
CHCHD3-206ENST00000496427 OR6F1Q8NGZ6 308 aa4.87□□□□□ -1.63
CHCHD3-206ENST00000496427 OR4X1Q8NH49 305 aa4.87□□□□□ -1.63
CHCHD3-206ENST00000496427 ZNRF2Q8NHG8 242 aa4.87□□□□□ -1.63
CHCHD3-206ENST00000496427 FAM210BQ96KR6 192 aa4.87□□□□□ -1.63
CHCHD3-206ENST00000496427 Q9H521 79 aa4.87□□□□□ -1.63
CHCHD3-206ENST00000496427 NRN1Q9NPD7 142 aa4.87□□□□□ -1.63
CHCHD3-206ENST00000496427 DMBT1Q9UGM3 2413 aaPredicted RBP4.87□□□□□ -1.63
CHCHD3-206ENST00000496427 A0A0B4J293 547 aa4.86□□□□□ -1.63
CHCHD3-206ENST00000496427 SMIM31A0A1B0GVY4 71 aa4.86□□□□□ -1.63
CHCHD3-206ENST00000496427 TMEM189A5PLL7 270 aa4.86□□□□□ -1.63
CHCHD3-206ENST00000496427 F6UB75 175 aa4.86□□□□□ -1.63
CHCHD3-206ENST00000496427 CORTO00230 105 aa4.86□□□□□ -1.63
CHCHD3-206ENST00000496427 IL4P05112 153 aa4.86□□□□□ -1.63
CHCHD3-206ENST00000496427 P0C879 139 aa4.86□□□□□ -1.63
CHCHD3-206ENST00000496427 IGLC1P0CG04 106 aa4.86□□□□□ -1.63
CHCHD3-206ENST00000496427 FUSP35637 526 aaKnown RBP eCLIP4.86□□□□□ -1.63
CHCHD3-206ENST00000496427 EIF2B2P49770 351 aaKnown RBP4.86□□□□□ -1.63
CHCHD3-206ENST00000496427 GABARAPL2P60520 117 aa4.86□□□□□ -1.63
CHCHD3-206ENST00000496427 TSPAN5P62079 268 aa4.86□□□□□ -1.63
CHCHD3-206ENST00000496427 DHODHQ02127 395 aa4.86□□□□□ -1.63
CHCHD3-206ENST00000496427 RNASE12Q5GAN4 147 aaKnown RBP4.86□□□□□ -1.63
CHCHD3-206ENST00000496427 TMEM69Q5SWH9 247 aa4.86□□□□□ -1.63
CHCHD3-206ENST00000496427 IZUMO2Q6UXV1 221 aa4.86□□□□□ -1.63
CHCHD3-206ENST00000496427 CROCCP3Q8IVE0 287 aa4.86□□□□□ -1.63
CHCHD3-206ENST00000496427 SPARTQ8N0X7 666 aa4.86□□□□□ -1.63
CHCHD3-206ENST00000496427 C1orf158Q8N1D5 194 aa4.86□□□□□ -1.63
CHCHD3-206ENST00000496427 OR4B1Q8NGF8 309 aa4.86□□□□□ -1.63
CHCHD3-206ENST00000496427 RAB24Q969Q5 203 aa4.86□□□□□ -1.63
CHCHD3-206ENST00000496427 LINC00052Q96N35 136 aa4.86□□□□□ -1.63
CHCHD3-206ENST00000496427 TP53RKQ96S44 253 aa4.86□□□□□ -1.63
CHCHD3-206ENST00000496427 C7orf50Q9BRJ6 194 aaKnown RBP4.86□□□□□ -1.63
CHCHD3-206ENST00000496427 PDCD10Q9BUL8 212 aa4.86□□□□□ -1.63
CHCHD3-206ENST00000496427 TEX48A0A1B0GUV7 120 aa4.85□□□□□ -1.63
CHCHD3-206ENST00000496427 RPS10-NUDT3A0A1W2PQS6 291 aa4.85□□□□□ -1.63
CHCHD3-206ENST00000496427 SMIM9A6NGZ8 99 aa4.85□□□□□ -1.63
CHCHD3-206ENST00000496427 INS-IGF2F8WCM5 200 aa4.85□□□□□ -1.63
CHCHD3-206ENST00000496427 M0QYG6 137 aa4.85□□□□□ -1.63
CHCHD3-206ENST00000496427 NXPH3O95157 252 aa4.85□□□□□ -1.63
CHCHD3-206ENST00000496427 NUDT3O95989 172 aa4.85□□□□□ -1.63
CHCHD3-206ENST00000496427 HBE1P02100 147 aa4.85□□□□□ -1.63
CHCHD3-206ENST00000496427 PGAM2P15259 253 aa4.85□□□□□ -1.63
CHCHD3-206ENST00000496427 S100GP29377 79 aa4.85□□□□□ -1.63
CHCHD3-206ENST00000496427 OR10J1P30954 320 aa4.85□□□□□ -1.63
CHCHD3-206ENST00000496427 NKX2-1P43699 371 aaPredicted RBP4.85□□□□□ -1.63
CHCHD3-206ENST00000496427 RORCP51449 518 aa4.85□□□□□ -1.63
CHCHD3-206ENST00000496427 OXA1LQ15070 435 aa4.85□□□□□ -1.63
CHCHD3-206ENST00000496427 BSXQ3C1V8 233 aa4.85□□□□□ -1.63
CHCHD3-206ENST00000496427 UBE2NLQ5JXB2 153 aa4.85□□□□□ -1.63
CHCHD3-206ENST00000496427 PRSS54Q6PEW0 395 aa4.85□□□□□ -1.63
CHCHD3-206ENST00000496427 LINC00299Q6ZSB3 139 aa4.85□□□□□ -1.63
CHCHD3-206ENST00000496427 C15orf53Q8NAA6 179 aa4.85□□□□□ -1.63
CHCHD3-206ENST00000496427 OR1S2Q8NGQ3 325 aa4.85□□□□□ -1.63
CHCHD3-206ENST00000496427 Q8WTZ3 238 aa4.85□□□□□ -1.63
CHCHD3-206ENST00000496427 RNF125Q96EQ8 232 aa4.85□□□□□ -1.63
CHCHD3-206ENST00000496427 KRTAP1-5Q9BYS1 174 aa4.85□□□□□ -1.63
CHCHD3-206ENST00000496427 SAV1Q9H4B6 383 aaPredicted RBP4.85□□□□□ -1.63
CHCHD3-206ENST00000496427 ENY2Q9NPA8 101 aa4.85□□□□□ -1.63
CHCHD3-206ENST00000496427 FAM212BQ9NTI7 297 aaPredicted RBP4.85□□□□□ -1.63
CHCHD3-206ENST00000496427 TRAV30A0A087WSZ9 112 aa4.84□□□□□ -1.63
CHCHD3-206ENST00000496427 C9orf118A6NHY6 69 aa4.84□□□□□ -1.63
CHCHD3-206ENST00000496427 ZNF705GA8MUZ8 300 aaPredicted RBP4.84□□□□□ -1.63
CHCHD3-206ENST00000496427 BUB3O43684 328 aa4.84□□□□□ -1.63
CHCHD3-206ENST00000496427 SCGB2A1O75556 95 aa4.84□□□□□ -1.63
CHCHD3-206ENST00000496427 ELK1P19419 428 aa4.84□□□□□ -1.63
CHCHD3-206ENST00000496427 PRSS3P35030 304 aa4.84□□□□□ -1.63
CHCHD3-206ENST00000496427 RPL5P46777 297 aaKnown RBP4.84□□□□□ -1.63
CHCHD3-206ENST00000496427 AP2S1P53680 142 aaPredicted RBP4.84□□□□□ -1.63
CHCHD3-206ENST00000496427 SUB1P53999 127 aaKnown RBP eCLIP4.84□□□□□ -1.633e-9■■■■■ 31.6
CHCHD3-206ENST00000496427 DLK1P80370 383 aa4.84□□□□□ -1.63
CHCHD3-206ENST00000496427 FCN2Q15485 313 aa4.84□□□□□ -1.63
CHCHD3-206ENST00000496427 RRN3P1Q2M238 152 aa4.84□□□□□ -1.63
CHCHD3-206ENST00000496427 SP6Q3SY56 376 aa4.84□□□□□ -1.63
CHCHD3-206ENST00000496427 FAM78BQ5VT40 261 aa4.84□□□□□ -1.63
CHCHD3-206ENST00000496427 FOXI2Q6ZQN5 318 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms