RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 TECRQ9NZ01 308 aaKnown RBP5.3□□□□□ -1.56
MSH5-217ENST00000494458 CSMD1Q96PZ7 3565 aa5.3□□□□□ -1.56
MSH5-217ENST00000494458 TEX15Q9BXT5 2789 aa5.3□□□□□ -1.56
MSH5-217ENST00000494458 A0A1W2PRE2 83 aa5.29□□□□□ -1.56
MSH5-217ENST00000494458 ZFP92A6NM28 416 aa5.29□□□□□ -1.56
MSH5-217ENST00000494458 F8W036 122 aa5.29□□□□□ -1.56
MSH5-217ENST00000494458 G3V318 75 aa5.29□□□□□ -1.56
MSH5-217ENST00000494458 CD5LO43866 347 aa5.29□□□□□ -1.56
MSH5-217ENST00000494458 IFNA1P01562 189 aa5.29□□□□□ -1.56
MSH5-217ENST00000494458 ARL14EPLP0DKL9 152 aa5.29□□□□□ -1.56
MSH5-217ENST00000494458 APELAP0DMC3 54 aa5.29□□□□□ -1.56
MSH5-217ENST00000494458 PSG1P11464 419 aa5.29□□□□□ -1.56
MSH5-217ENST00000494458 NPPCP23582 126 aa5.29□□□□□ -1.56
MSH5-217ENST00000494458 GCHFRP30047 84 aa5.29□□□□□ -1.56
MSH5-217ENST00000494458 MYCNOSP40205 109 aa5.29□□□□□ -1.56
MSH5-217ENST00000494458 BLCAPP62952 87 aa5.29□□□□□ -1.56
MSH5-217ENST00000494458 MEF2BQ02080 365 aaPredicted RBP5.29□□□□□ -1.56
MSH5-217ENST00000494458 FAM74A3Q4VXF1 159 aa5.29□□□□□ -1.56
MSH5-217ENST00000494458 FAM78BQ5VT40 261 aa5.29□□□□□ -1.56
MSH5-217ENST00000494458 MORN5Q5VZ52 161 aa5.29□□□□□ -1.56
MSH5-217ENST00000494458 ATRAIDQ6UW56 229 aa5.29□□□□□ -1.56
MSH5-217ENST00000494458 UNQ5815/PRO19632Q6UWF5 114 aa5.29□□□□□ -1.56
MSH5-217ENST00000494458 MIR17HGQ75NE6 70 aa5.29□□□□□ -1.56
MSH5-217ENST00000494458 TMEM219Q86XT9 240 aa5.29□□□□□ -1.56
MSH5-217ENST00000494458 C22orf15Q8WYQ4 148 aa5.29□□□□□ -1.56
MSH5-217ENST00000494458 TMEM190Q8WZ59 177 aa5.29□□□□□ -1.56
MSH5-217ENST00000494458 SLC25A2Q9BXI2 301 aa5.29□□□□□ -1.56
MSH5-217ENST00000494458 C21orf62Q9NYP8 219 aa5.29□□□□□ -1.56
MSH5-217ENST00000494458 TMEM14CQ9P0S9 112 aa5.29□□□□□ -1.56
MSH5-217ENST00000494458 GNG13Q9P2W3 67 aa5.29□□□□□ -1.56
MSH5-217ENST00000494458 MXRA5Q9NR99 2828 aa5.29□□□□□ -1.56
MSH5-217ENST00000494458 ZFHX3Q15911 3703 aa5.29□□□□□ -1.56
MSH5-217ENST00000494458 ITPR3Q14573 2671 aa5.29□□□□□ -1.56
MSH5-217ENST00000494458 TRBV7-1A0A0A6YYK4 115 aa5.28□□□□□ -1.56
MSH5-217ENST00000494458 TRAV41A0A0B4J266 112 aa5.28□□□□□ -1.56
MSH5-217ENST00000494458 FAM223BA6NKX1 122 aa5.28□□□□□ -1.56
MSH5-217ENST00000494458 FAM74A7A6NL05 159 aa5.28□□□□□ -1.56
MSH5-217ENST00000494458 MRPS12O15235 138 aaKnown RBP5.28□□□□□ -1.56
MSH5-217ENST00000494458 PDE6DO43924 150 aa5.28□□□□□ -1.56
MSH5-217ENST00000494458 HYPMO75409 117 aa5.28□□□□□ -1.56
MSH5-217ENST00000494458 EIF3GO75821 320 aaKnown RBP eCLIP5.28□□□□□ -1.56
MSH5-217ENST00000494458 SNAPINO95295 136 aa5.28□□□□□ -1.56
MSH5-217ENST00000494458 IGHV3-48P01763 117 aa5.28□□□□□ -1.56
MSH5-217ENST00000494458 IGHV4-59P01825 116 aa5.28□□□□□ -1.56
MSH5-217ENST00000494458 APOC3P02656 99 aa5.28□□□□□ -1.56
MSH5-217ENST00000494458 FABP1P07148 127 aa5.28□□□□□ -1.56
MSH5-217ENST00000494458 RD3LP0DJH9 198 aa5.28□□□□□ -1.56
MSH5-217ENST00000494458 ADMP35318 185 aa5.28□□□□□ -1.56
MSH5-217ENST00000494458 TAS2R45P59539 299 aa5.28□□□□□ -1.56
MSH5-217ENST00000494458 KIAA0141Q14154 515 aaPredicted RBP5.28□□□□□ -1.56
MSH5-217ENST00000494458 TIGITQ495A1 244 aa5.28□□□□□ -1.56
MSH5-217ENST00000494458 SOHLH1Q5JUK2 328 aa5.28□□□□□ -1.56
MSH5-217ENST00000494458 C10orf113Q5VZT2 155 aa5.28□□□□□ -1.56
MSH5-217ENST00000494458 Q6ZS46 218 aa5.28□□□□□ -1.56
MSH5-217ENST00000494458 FAM223AQ8IWN6 122 aa5.28□□□□□ -1.56
MSH5-217ENST00000494458 RNF152Q8N8N0 203 aa5.28□□□□□ -1.56
MSH5-217ENST00000494458 CYB561D1Q8N8Q1 229 aa5.28□□□□□ -1.56
MSH5-217ENST00000494458 STXBP6Q8NFX7 210 aa5.28□□□□□ -1.56
MSH5-217ENST00000494458 OR5T1Q8NG75 326 aa5.28□□□□□ -1.56
MSH5-217ENST00000494458 OR51G1Q8NGK1 321 aa5.28□□□□□ -1.56
MSH5-217ENST00000494458 MYOZ3Q8TDC0 251 aa5.28□□□□□ -1.56
MSH5-217ENST00000494458 RXFP4Q8TDU9 374 aa5.28□□□□□ -1.56
MSH5-217ENST00000494458 C11orf52Q96A22 123 aa5.28□□□□□ -1.56
MSH5-217ENST00000494458 USMG5Q96IX5 58 aa5.28□□□□□ -1.56
MSH5-217ENST00000494458 NKX6-2Q9C056 277 aaPredicted RBP5.28□□□□□ -1.56
MSH5-217ENST00000494458 TUBA4BQ9H853 241 aa5.28□□□□□ -1.56
MSH5-217ENST00000494458 TMEM167BQ9NRX6 74 aa5.28□□□□□ -1.56
MSH5-217ENST00000494458 GAR1Q9NY12 217 aaKnown RBP5.28□□□□□ -1.56
MSH5-217ENST00000494458 DOK5Q9P104 306 aa5.28□□□□□ -1.56
MSH5-217ENST00000494458 FBXL7Q9UJT9 491 aa5.28□□□□□ -1.56
MSH5-217ENST00000494458 VPREB3Q9UKI3 123 aa5.28□□□□□ -1.56
MSH5-217ENST00000494458 A0A1B0GV50 99 aa5.27□□□□□ -1.57
MSH5-217ENST00000494458 MDFIC2A0A1B0GVS7 189 aa5.27□□□□□ -1.57
MSH5-217ENST00000494458 F6UZH7 168 aa5.27□□□□□ -1.57
MSH5-217ENST00000494458 CLDN34H7C241 214 aa5.27□□□□□ -1.57
MSH5-217ENST00000494458 DNASE2O00115 360 aaPredicted RBP5.27□□□□□ -1.57
MSH5-217ENST00000494458 AP4M1O00189 453 aa5.27□□□□□ -1.57
MSH5-217ENST00000494458 HMGB3O15347 200 aaKnown RBP5.27□□□□□ -1.57
MSH5-217ENST00000494458 PAGE4O60829 102 aa5.27□□□□□ -1.57
MSH5-217ENST00000494458 IGHG4P01861 327 aa5.27□□□□□ -1.57
MSH5-217ENST00000494458 GP9P14770 177 aa5.27□□□□□ -1.57
MSH5-217ENST00000494458 RHOGP84095 191 aa5.27□□□□□ -1.57
MSH5-217ENST00000494458 C15orf32Q32M92 178 aa5.27□□□□□ -1.57
MSH5-217ENST00000494458 C4orf48Q5BLP8 95 aa5.27□□□□□ -1.57
MSH5-217ENST00000494458 LINC00305Q7Z4B0 112 aa5.27□□□□□ -1.57
MSH5-217ENST00000494458 CLRN3Q8NCR9 226 aa5.27□□□□□ -1.57
MSH5-217ENST00000494458 FXYD5Q96DB9 178 aa5.27□□□□□ -1.57
MSH5-217ENST00000494458 CCDC140Q96MF4 163 aa5.27□□□□□ -1.57
MSH5-217ENST00000494458 TCEAL7Q9BRU2 100 aa5.27□□□□□ -1.57
MSH5-217ENST00000494458 SHANK2-AS3Q9BTD1 123 aa5.27□□□□□ -1.57
MSH5-217ENST00000494458 CHRDL1Q9BU40 450 aa5.27□□□□□ -1.57
MSH5-217ENST00000494458 GSX1Q9H4S2 264 aaPredicted RBP5.27□□□□□ -1.57
MSH5-217ENST00000494458 SDF2L1Q9HCN8 221 aa5.27□□□□□ -1.57
MSH5-217ENST00000494458 ZNF355PQ9NSJ1 428 aa5.27□□□□□ -1.57
MSH5-217ENST00000494458 TMEM242Q9NWH2 141 aa5.27□□□□□ -1.57
MSH5-217ENST00000494458 YTHDF2Q9Y5A9 579 aaKnown RBP5.27□□□□□ -1.57
MSH5-217ENST00000494458 U3KQE9 123 aa5.27□□□□□ -1.57
MSH5-217ENST00000494458 FASNP49327 2511 aaKnown RBP5.26□□□□□ -1.57
MSH5-217ENST00000494458 A0A087WWC5 75 aa5.26□□□□□ -1.57
MSH5-217ENST00000494458 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms