RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 TRAV41A0A0B4J266 112 aa16.59■□□□□ 0.25
RNF40-203ENST00000493683 ADARB2-AS1A8MUL3 147 aa16.59■□□□□ 0.25
RNF40-203ENST00000493683 C9orf139Q6ZV77 190 aa16.59■□□□□ 0.25
RNF40-203ENST00000493683 PLSCR4Q9NRQ2 329 aa16.59■□□□□ 0.25
RNF40-203ENST00000493683 NRXN2Q9P2S2 1712 aa16.59■□□□□ 0.25
RNF40-203ENST00000493683 A0A087WV48 116 aa16.59■□□□□ 0.25
RNF40-203ENST00000493683 OVOL2Q9BRP0 275 aa16.59■□□□□ 0.25
RNF40-203ENST00000493683 PATJQ8NI35 1801 aa16.59■□□□□ 0.25
RNF40-203ENST00000493683 ZNF688P0C7X2 276 aa16.58■□□□□ 0.25
RNF40-203ENST00000493683 IGHV2-26A0A0B4J1V2 119 aa16.58■□□□□ 0.24
RNF40-203ENST00000493683 GLMPQ8WWB7 406 aa16.58■□□□□ 0.24
RNF40-203ENST00000493683 SPRR3Q9UBC9 169 aa16.58■□□□□ 0.24
RNF40-203ENST00000493683 RALGAPA2Q2PPJ7 1873 aa16.58■□□□□ 0.24
RNF40-203ENST00000493683 LYL1P12980 280 aa16.58■□□□□ 0.24
RNF40-203ENST00000493683 EVI2AP22794 236 aa16.57■□□□□ 0.24
RNF40-203ENST00000493683 MGST2Q99735 147 aa16.57■□□□□ 0.24
RNF40-203ENST00000493683 NTN3O00634 580 aaPredicted RBP16.57■□□□□ 0.24
RNF40-203ENST00000493683 CDKN1AP38936 164 aa16.57■□□□□ 0.24
RNF40-203ENST00000493683 TRAV12-3A0A0B4J271 114 aa16.57■□□□□ 0.24
RNF40-203ENST00000493683 ZNF124Q15973 351 aa16.57■□□□□ 0.24
RNF40-203ENST00000493683 GGNQ86UU5 652 aa16.57■□□□□ 0.24
RNF40-203ENST00000493683 RPP25LQ8N5L8 163 aaKnown RBP16.57■□□□□ 0.24
RNF40-203ENST00000493683 MTCL1Q9Y4B5 1905 aaKnown RBP16.57■□□□□ 0.24
RNF40-203ENST00000493683 CACNA1IQ9P0X4 2223 aa16.57■□□□□ 0.24
RNF40-203ENST00000493683 EP300Q09472 2414 aaPredicted RBP16.57■□□□□ 0.24
RNF40-203ENST00000493683 REG4Q9BYZ8 158 aa16.56■□□□□ 0.24
RNF40-203ENST00000493683 TRAV5A0A0B4J249 113 aa16.56■□□□□ 0.24
RNF40-203ENST00000493683 GFI1BQ5VTD9 330 aa16.56■□□□□ 0.24
RNF40-203ENST00000493683 TDRD6O60522 2096 aaKnown RBP16.56■□□□□ 0.24
RNF40-203ENST00000493683 ZDBF2Q9HCK1 2354 aa16.56■□□□□ 0.24
RNF40-203ENST00000493683 NPIPB5A8MRT5 1133 aa16.56■□□□□ 0.24
RNF40-203ENST00000493683 PSG1P11464 419 aa16.56■□□□□ 0.24
RNF40-203ENST00000493683 TRIOBPQ9H2D6 2365 aa16.56■□□□□ 0.24
RNF40-203ENST00000493683 IGHV1-8P0DP01 117 aa16.56■□□□□ 0.24
RNF40-203ENST00000493683 MST1P26927 711 aa16.56■□□□□ 0.24
RNF40-203ENST00000493683 ZNF138P52744 262 aa16.56■□□□□ 0.24
RNF40-203ENST00000493683 CD300EQ496F6 205 aaPredicted RBP16.56■□□□□ 0.24
RNF40-203ENST00000493683 OR10W1Q8NGF6 305 aa16.56■□□□□ 0.24
RNF40-203ENST00000493683 LINC00477Q96M19 166 aa16.56■□□□□ 0.24
RNF40-203ENST00000493683 FGFBP3Q8TAT2 258 aa16.55■□□□□ 0.24
RNF40-203ENST00000493683 RTTNQ86VV8 2226 aa16.55■□□□□ 0.24
RNF40-203ENST00000493683 D6R8Y8 96 aa16.55■□□□□ 0.24
RNF40-203ENST00000493683 KLF17Q5JT82 389 aaPredicted RBP16.55■□□□□ 0.24
RNF40-203ENST00000493683 PRADC1Q9BSG0 188 aa16.55■□□□□ 0.24
RNF40-203ENST00000493683 DPH3P1Q9H4G8 78 aa16.55■□□□□ 0.24
RNF40-203ENST00000493683 PMS2P5A8MQ11 134 aa16.55■□□□□ 0.24
RNF40-203ENST00000493683 IGKV1-5P01602 117 aa16.55■□□□□ 0.24
RNF40-203ENST00000493683 S100A7L2Q5SY68 101 aa16.55■□□□□ 0.24
RNF40-203ENST00000493683 SRSF8Q9BRL6 282 aaKnown RBP16.55■□□□□ 0.24
RNF40-203ENST00000493683 GVINP1Q7Z2Y8 2422 aa16.55■□□□□ 0.24
RNF40-203ENST00000493683 TRBV7-1A0A0A6YYK4 115 aa16.55■□□□□ 0.24
RNF40-203ENST00000493683 GREB1LQ9C091 1923 aaPredicted RBP16.54■□□□□ 0.24
RNF40-203ENST00000493683 VCYO14598 125 aa16.54■□□□□ 0.24
RNF40-203ENST00000493683 GAGE2BQ13066 116 aa16.54■□□□□ 0.24
RNF40-203ENST00000493683 GAGE2EQ4V326 116 aa16.54■□□□□ 0.24
RNF40-203ENST00000493683 TPTE2P1Q5T6R2 138 aa16.54■□□□□ 0.24
RNF40-203ENST00000493683 GAGE2DQ9UEU5 116 aa16.54■□□□□ 0.24
RNF40-203ENST00000493683 SPTBP11277 2137 aa16.54■□□□□ 0.24
RNF40-203ENST00000493683 OTOFQ9HC10 1997 aa16.54■□□□□ 0.24
RNF40-203ENST00000493683 SNRNP200O75643 2136 aaKnown RBP16.54■□□□□ 0.24
RNF40-203ENST00000493683 IGKV3D-20A0A0C4DH25 116 aa16.54■□□□□ 0.24
RNF40-203ENST00000493683 PPIFP30405 207 aaKnown RBP16.54■□□□□ 0.24
RNF40-203ENST00000493683 IGKV1-27A0A075B6S5 117 aa16.54■□□□□ 0.24
RNF40-203ENST00000493683 LGALS1P09382 135 aaKnown RBP16.54■□□□□ 0.24
RNF40-203ENST00000493683 HTN3P15516 51 aa16.54■□□□□ 0.24
RNF40-203ENST00000493683 RASL10AQ92737 203 aa16.54■□□□□ 0.24
RNF40-203ENST00000493683 IGHV1-3A0A0C4DH29 117 aa16.54■□□□□ 0.24
RNF40-203ENST00000493683 CKS1BP61024 79 aa16.53■□□□□ 0.24
RNF40-203ENST00000493683 CHCHD5Q9BSY4 110 aa16.53■□□□□ 0.24
RNF40-203ENST00000493683 SCN8AQ9UQD0 1980 aa16.53■□□□□ 0.24
RNF40-203ENST00000493683 TMEM8BA6NDV4 472 aa16.53■□□□□ 0.24
RNF40-203ENST00000493683 LYZL1Q6UWQ5 148 aa16.53■□□□□ 0.24
RNF40-203ENST00000493683 GFRA4Q9GZZ7 299 aa16.53■□□□□ 0.24
RNF40-203ENST00000493683 DLEU1O43261 78 aa16.53■□□□□ 0.24
RNF40-203ENST00000493683 ZFAND6Q6FIF0 208 aa16.53■□□□□ 0.24
RNF40-203ENST00000493683 PIKFYVEQ9Y2I7 2098 aa16.53■□□□□ 0.24
RNF40-203ENST00000493683 PINLYPA6NC86 204 aa16.53■□□□□ 0.24
RNF40-203ENST00000493683 EFNA2O43921 213 aa16.53■□□□□ 0.24
RNF40-203ENST00000493683 BCL6BQ8N143 479 aaPredicted RBP16.53■□□□□ 0.24
RNF40-203ENST00000493683 HEATR5BQ9P2D3 2071 aa16.53■□□□□ 0.24
RNF40-203ENST00000493683 M0R1W7 72 aa16.52■□□□□ 0.24
RNF40-203ENST00000493683 SPATA31B1PQ5VZV4 182 aa16.52■□□□□ 0.24
RNF40-203ENST00000493683 PSG3Q16557 428 aa16.52■□□□□ 0.24
RNF40-203ENST00000493683 C15orf32Q32M92 178 aa16.52■□□□□ 0.24
RNF40-203ENST00000493683 TMEM200BQ69YZ2 307 aa16.52■□□□□ 0.24
RNF40-203ENST00000493683 LINC00158P58513 81 aa16.52■□□□□ 0.24
RNF40-203ENST00000493683 TMEM105Q8N8V8 129 aa16.52■□□□□ 0.24
RNF40-203ENST00000493683 PNRC2Q9NPJ4 139 aaKnown RBP16.52■□□□□ 0.23
RNF40-203ENST00000493683 METRNQ9UJH8 293 aa16.52■□□□□ 0.23
RNF40-203ENST00000493683 IGKV2-40A0A087WW87 121 aaPredicted RBP16.51■□□□□ 0.23
RNF40-203ENST00000493683 IGKV2D-40P01614 121 aaPredicted RBP16.51■□□□□ 0.23
RNF40-203ENST00000493683 SFTA2Q6UW10 78 aa16.51■□□□□ 0.23
RNF40-203ENST00000493683 TEX43Q6ZNM6 134 aa16.51■□□□□ 0.23
RNF40-203ENST00000493683 GTSCR1Q86UQ5 136 aa16.51■□□□□ 0.23
RNF40-203ENST00000493683 SPAG8Q99932 426 aaPredicted RBP16.51■□□□□ 0.23
RNF40-203ENST00000493683 TMEM178BH3BS89 294 aa16.51■□□□□ 0.23
RNF40-203ENST00000493683 RPL36AP83881 106 aaKnown RBP16.51■□□□□ 0.23
RNF40-203ENST00000493683 NUP35Q8NFH5 326 aa16.51■□□□□ 0.23
RNF40-203ENST00000493683 RPL36ALQ969Q0 106 aaKnown RBP16.51■□□□□ 0.23
RNF40-203ENST00000493683 SCRT1Q9BWW7 348 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms