RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 PSG1P11464 419 aa12.43□□□□□ -0.42
COL9A1-210ENST00000493682 ZNF182P17025 639 aaPredicted RBP12.43□□□□□ -0.42
COL9A1-210ENST00000493682 NKX2-1P43699 371 aaPredicted RBP12.43□□□□□ -0.42
COL9A1-210ENST00000493682 TMEM268Q5VZI3 342 aa12.43□□□□□ -0.42
COL9A1-210ENST00000493682 FAAP20Q6NZ36 180 aa12.43□□□□□ -0.42
COL9A1-210ENST00000493682 C15orf40Q8WUR7 153 aa12.43□□□□□ -0.42
COL9A1-210ENST00000493682 NEU1Q99519 415 aa12.43□□□□□ -0.42
COL9A1-210ENST00000493682 SPART-AS1P0CW21 52 aa12.42□□□□□ -0.42
COL9A1-210ENST00000493682 EMP1P54849 157 aa12.42□□□□□ -0.42
COL9A1-210ENST00000493682 GDF5OSQ5U4N7 250 aa12.42□□□□□ -0.42
COL9A1-210ENST00000493682 OR51G1Q8NGK1 321 aa12.42□□□□□ -0.42
COL9A1-210ENST00000493682 NAA50Q9GZZ1 169 aaKnown RBP12.42□□□□□ -0.42
COL9A1-210ENST00000493682 DNAH17Q9UFH2 4485 aa12.41□□□□□ -0.42
COL9A1-210ENST00000493682 TMEM189A5PLL7 270 aa12.41□□□□□ -0.42
COL9A1-210ENST00000493682 SMIM9A6NGZ8 99 aa12.41□□□□□ -0.42
COL9A1-210ENST00000493682 CRYM-AS1A6NIL9 109 aa12.41□□□□□ -0.42
COL9A1-210ENST00000493682 GABARAPH6UMI1 98 aa12.41□□□□□ -0.42
COL9A1-210ENST00000493682 GABARAPO95166 117 aa12.41□□□□□ -0.42
COL9A1-210ENST00000493682 IGKV3-20P01619 116 aa12.41□□□□□ -0.42
COL9A1-210ENST00000493682 FXYD7P58549 80 aa12.41□□□□□ -0.42
COL9A1-210ENST00000493682 DEFB1P60022 68 aa12.41□□□□□ -0.42
COL9A1-210ENST00000493682 SURF2Q15527 256 aaPredicted RBP12.41□□□□□ -0.42
COL9A1-210ENST00000493682 CTF1Q16619 201 aa12.41□□□□□ -0.42
COL9A1-210ENST00000493682 LGALS9BQ3B8N2 356 aa12.41□□□□□ -0.42
COL9A1-210ENST00000493682 NMSQ5H8A3 153 aa12.41□□□□□ -0.42
COL9A1-210ENST00000493682 GPR107Q5VW38 600 aa12.41□□□□□ -0.42
COL9A1-210ENST00000493682 NOXA1Q86UR1 476 aa12.41□□□□□ -0.42
COL9A1-210ENST00000493682 RNF125Q96EQ8 232 aa12.4□□□□□ -0.42
COL9A1-210ENST00000493682 LINC00052Q96N35 136 aa12.4□□□□□ -0.42
COL9A1-210ENST00000493682 WDR12Q9GZL7 423 aaKnown RBP12.4□□□□□ -0.42
COL9A1-210ENST00000493682 MIXL1Q9H2W2 232 aa12.4□□□□□ -0.42
COL9A1-210ENST00000493682 CACFD1Q9UGQ2 172 aa12.4□□□□□ -0.42
COL9A1-210ENST00000493682 GPR132Q9UNW8 380 aa12.4□□□□□ -0.42
COL9A1-210ENST00000493682 TMEM56-RWDD3S4R434 201 aa12.4□□□□□ -0.42
COL9A1-210ENST00000493682 IGHV3OR16-12A0A075B7B8 117 aa12.39□□□□□ -0.43
COL9A1-210ENST00000493682 IFNA10P01566 189 aa12.39□□□□□ -0.43
COL9A1-210ENST00000493682 SULT1A3P0DMM9 295 aa12.39□□□□□ -0.43
COL9A1-210ENST00000493682 SULT1A4P0DMN0 295 aa12.39□□□□□ -0.43
COL9A1-210ENST00000493682 NUP62P37198 522 aaPredicted RBP12.39□□□□□ -0.43
COL9A1-210ENST00000493682 SSBP1Q04837 148 aaKnown RBP12.39□□□□□ -0.43
COL9A1-210ENST00000493682 KLF9Q13886 244 aaPredicted RBP12.39□□□□□ -0.43
COL9A1-210ENST00000493682 PBDC1Q9BVG4 233 aa12.39□□□□□ -0.43
COL9A1-210ENST00000493682 SAV1Q9H4B6 383 aaPredicted RBP12.39□□□□□ -0.43
COL9A1-210ENST00000493682 RFNGQ9Y644 331 aa12.39□□□□□ -0.43
COL9A1-210ENST00000493682 IGLV2-18A0A075B6J9 118 aa12.38□□□□□ -0.43
COL9A1-210ENST00000493682 DISC1C4P0D8 188 aa12.38□□□□□ -0.43
COL9A1-210ENST00000493682 IFNA21P01568 189 aa12.38□□□□□ -0.43
COL9A1-210ENST00000493682 OR8G2PQ6IF36 304 aa12.38□□□□□ -0.43
COL9A1-210ENST00000493682 FOXI2Q6ZQN5 318 aa12.38□□□□□ -0.43
COL9A1-210ENST00000493682 UBE2DNLQ8IWF7 75 aa12.38□□□□□ -0.43
COL9A1-210ENST00000493682 ZNF709Q8N972 641 aa12.38□□□□□ -0.43
COL9A1-210ENST00000493682 FAM210BQ96KR6 192 aa12.38□□□□□ -0.43
COL9A1-210ENST00000493682 CLUHP3Q96NS8 147 aa12.38□□□□□ -0.43
COL9A1-210ENST00000493682 PRR13Q9NZ81 148 aa12.38□□□□□ -0.43
COL9A1-210ENST00000493682 DKK2Q9UBU2 259 aa12.38□□□□□ -0.43
COL9A1-210ENST00000493682 PFDN2Q9UHV9 154 aa12.38□□□□□ -0.43
COL9A1-210ENST00000493682 U3KQ87 197 aa12.38□□□□□ -0.43
COL9A1-210ENST00000493682 SOCS3O14543 225 aa12.37□□□□□ -0.43
COL9A1-210ENST00000493682 ID1P41134 155 aa12.37□□□□□ -0.43
COL9A1-210ENST00000493682 PSMB3P49720 205 aa12.37□□□□□ -0.43
COL9A1-210ENST00000493682 MRPS10P82664 201 aaKnown RBP12.37□□□□□ -0.43
COL9A1-210ENST00000493682 FAM222AQ5U5X8 452 aa12.37□□□□□ -0.43
COL9A1-210ENST00000493682 Q6ZR54 194 aa12.37□□□□□ -0.43
COL9A1-210ENST00000493682 LGI3Q8N145 548 aa12.37□□□□□ -0.43
COL9A1-210ENST00000493682 OR4C16Q8NGL9 310 aa12.37□□□□□ -0.43
COL9A1-210ENST00000493682 IL22RA2Q969J5 263 aa12.37□□□□□ -0.43
COL9A1-210ENST00000493682 NIPSNAP3BQ9BS92 247 aa12.37□□□□□ -0.43
COL9A1-210ENST00000493682 HSPB7Q9UBY9 170 aa12.37□□□□□ -0.43
COL9A1-210ENST00000493682 RYR1P21817 5038 aa12.37□□□□□ -0.43
COL9A1-210ENST00000493682 IGKV1D-37A0A075B6S9 117 aa12.36□□□□□ -0.43
COL9A1-210ENST00000493682 ZFP92A6NM28 416 aa12.36□□□□□ -0.43
COL9A1-210ENST00000493682 AKAIN1P0CW23 69 aa12.36□□□□□ -0.43
COL9A1-210ENST00000493682 ZNF90Q03938 601 aa12.36□□□□□ -0.43
COL9A1-210ENST00000493682 GSG1LQ6UXU4 331 aa12.36□□□□□ -0.43
COL9A1-210ENST00000493682 OR4B1Q8NGF8 309 aa12.36□□□□□ -0.43
COL9A1-210ENST00000493682 COQ8AQ8NI60 647 aa12.36□□□□□ -0.43
COL9A1-210ENST00000493682 DTD1Q8TEA8 209 aa12.36□□□□□ -0.43
COL9A1-210ENST00000493682 SMIM4Q8WVI0 70 aa12.36□□□□□ -0.43
COL9A1-210ENST00000493682 SLC35B3Q9H1N7 401 aa12.36□□□□□ -0.43
COL9A1-210ENST00000493682 RBKSQ9H477 322 aa12.36□□□□□ -0.43
COL9A1-210ENST00000493682 TEX48A0A1B0GUV7 120 aa12.35□□□□□ -0.43
COL9A1-210ENST00000493682 RGS5O15539 181 aa12.35□□□□□ -0.43
COL9A1-210ENST00000493682 GPX4P36969 197 aaPredicted RBP12.35□□□□□ -0.43
COL9A1-210ENST00000493682 CCR6P51684 374 aa12.35□□□□□ -0.43
COL9A1-210ENST00000493682 SUPT4H1P63272 117 aaKnown RBP12.35□□□□□ -0.43
COL9A1-210ENST00000493682 GAMTQ14353 236 aa12.35□□□□□ -0.43
COL9A1-210ENST00000493682 SMCO1Q147U7 214 aa12.35□□□□□ -0.43
COL9A1-210ENST00000493682 ZNF79Q15937 498 aa12.35□□□□□ -0.43
COL9A1-210ENST00000493682 C1orf194Q5T5A4 169 aa12.35□□□□□ -0.43
COL9A1-210ENST00000493682 OR51S1Q8NGJ8 323 aa12.35□□□□□ -0.43
COL9A1-210ENST00000493682 PRRT1Q99946 306 aa12.35□□□□□ -0.43
COL9A1-210ENST00000493682 KCNIP3Q9Y2W7 256 aa12.35□□□□□ -0.43
COL9A1-210ENST00000493682 PKD1P98161 4303 aa12.35□□□□□ -0.43
COL9A1-210ENST00000493682 CTDSP2O14595 271 aa12.34□□□□□ -0.43
COL9A1-210ENST00000493682 HTN3P15516 51 aa12.34□□□□□ -0.43
COL9A1-210ENST00000493682 LYZP61626 148 aa12.34□□□□□ -0.43
COL9A1-210ENST00000493682 PSG9Q00887 426 aa12.34□□□□□ -0.43
COL9A1-210ENST00000493682 SPATA31B1PQ5VZV4 182 aa12.34□□□□□ -0.43
COL9A1-210ENST00000493682 LYZL2Q7Z4W2 148 aa12.34□□□□□ -0.43
COL9A1-210ENST00000493682 C1orf158Q8N1D5 194 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms