RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 FAM213BQ8TBF2 198 aa9.79□□□□□ -0.84
VPS52-220ENST00000493674 MBD3L1Q8WWY6 194 aa9.79□□□□□ -0.84
VPS52-220ENST00000493674 CHRDL1Q9BU40 450 aa9.79□□□□□ -0.84
VPS52-220ENST00000493674 CTXND1A0A1B0GTU2 59 aa9.78□□□□□ -0.84
VPS52-220ENST00000493674 WI2-2373I1.2A0A1W2PRP0 233 aa9.78□□□□□ -0.84
VPS52-220ENST00000493674 OR2T8A6NH00 312 aa9.78□□□□□ -0.84
VPS52-220ENST00000493674 TGOLN2O43493 480 aa9.78□□□□□ -0.84
VPS52-220ENST00000493674 OR2C1O95371 312 aa9.78□□□□□ -0.84
VPS52-220ENST00000493674 IGHV3-23P01764 117 aa9.78□□□□□ -0.84
VPS52-220ENST00000493674 FABP1P07148 127 aa9.78□□□□□ -0.84
VPS52-220ENST00000493674 OR5G3P0C626 314 aa9.78□□□□□ -0.84
VPS52-220ENST00000493674 GPR183P32249 361 aa9.78□□□□□ -0.84
VPS52-220ENST00000493674 FAM209BQ5JX69 171 aa9.78□□□□□ -0.84
VPS52-220ENST00000493674 PATE2Q6UY27 113 aa9.78□□□□□ -0.84
VPS52-220ENST00000493674 LCNL1Q6ZST4 164 aa9.78□□□□□ -0.84
VPS52-220ENST00000493674 ZNF491Q8N8L2 437 aa9.78□□□□□ -0.84
VPS52-220ENST00000493674 OR10G4Q8NGN3 311 aa9.78□□□□□ -0.84
VPS52-220ENST00000493674 OR10G9Q8NGN4 311 aa9.78□□□□□ -0.84
VPS52-220ENST00000493674 OR10G7Q8NGN6 311 aa9.78□□□□□ -0.84
VPS52-220ENST00000493674 LINC01006Q8NI28 216 aa9.78□□□□□ -0.84
VPS52-220ENST00000493674 TMEM37Q8WXS4 190 aa9.78□□□□□ -0.84
VPS52-220ENST00000493674 C19orf24Q9BVV8 132 aa9.78□□□□□ -0.84
VPS52-220ENST00000493674 FBN1P35555 2871 aaKnown RBP9.78□□□□□ -0.84
VPS52-220ENST00000493674 ANK2Q01484 3957 aa9.77□□□□□ -0.85
VPS52-220ENST00000493674 RPLP1P05386 114 aaKnown RBP9.77□□□□□ -0.85
VPS52-220ENST00000493674 CRYBA1P05813 215 aa9.77□□□□□ -0.85
VPS52-220ENST00000493674 ZNF616Q08AN1 781 aa9.77□□□□□ -0.85
VPS52-220ENST00000493674 TCTEX1D4Q5JR98 221 aa9.77□□□□□ -0.85
VPS52-220ENST00000493674 CLEC19AQ6UXS0 136 aa9.77□□□□□ -0.85
VPS52-220ENST00000493674 KLHDC1Q8N7A1 406 aa9.77□□□□□ -0.85
VPS52-220ENST00000493674 OR51G1Q8NGK1 321 aa9.77□□□□□ -0.85
VPS52-220ENST00000493674 GATAD1Q8WUU5 269 aa9.77□□□□□ -0.85
VPS52-220ENST00000493674 PFDN5Q99471 154 aa9.77□□□□□ -0.85
VPS52-220ENST00000493674 NUPL2O15504 423 aaKnown RBP9.76□□□□□ -0.85
VPS52-220ENST00000493674 SCGB2A1O75556 95 aa9.76□□□□□ -0.85
VPS52-220ENST00000493674 CLEC3BP05452 202 aa9.76□□□□□ -0.85
VPS52-220ENST00000493674 RD3LP0DJH9 198 aa9.76□□□□□ -0.85
VPS52-220ENST00000493674 CDC34P49427 236 aaPredicted RBP9.76□□□□□ -0.85
VPS52-220ENST00000493674 RHOBP62745 196 aa9.76□□□□□ -0.85
VPS52-220ENST00000493674 FAM122CQ6P4D5 195 aa9.76□□□□□ -0.85
VPS52-220ENST00000493674 ZNF600Q6ZNG1 722 aa9.76□□□□□ -0.85
VPS52-220ENST00000493674 OR1L4Q8NGR5 311 aa9.76□□□□□ -0.85
VPS52-220ENST00000493674 WFDC12Q8WWY7 111 aa9.76□□□□□ -0.85
VPS52-220ENST00000493674 RAB24Q969Q5 203 aa9.76□□□□□ -0.85
VPS52-220ENST00000493674 UBE2E2Q96LR5 201 aa9.76□□□□□ -0.85
VPS52-220ENST00000493674 RNF2Q99496 336 aa9.76□□□□□ -0.85
VPS52-220ENST00000493674 MRPL32Q9BYC8 188 aaKnown RBP9.76□□□□□ -0.85
VPS52-220ENST00000493674 ACTR3CQ9C0K3 210 aaPredicted RBP9.76□□□□□ -0.85
VPS52-220ENST00000493674 ZFAND3Q9H8U3 227 aa9.76□□□□□ -0.85
VPS52-220ENST00000493674 SLC25A22Q9H936 323 aa9.76□□□□□ -0.85
VPS52-220ENST00000493674 MRPL27Q9P0M9 148 aaKnown RBP9.76□□□□□ -0.85
VPS52-220ENST00000493674 FUT9Q9Y231 359 aa9.76□□□□□ -0.85
VPS52-220ENST00000493674 ELOA3CA0A087WX78 387 aaPredicted RBP9.75□□□□□ -0.85
VPS52-220ENST00000493674 MAP1LC3B2A6NCE7 125 aa9.75□□□□□ -0.85
VPS52-220ENST00000493674 BMPR1BO00238 502 aa9.75□□□□□ -0.85
VPS52-220ENST00000493674 TRBV12-3P01733 135 aa9.75□□□□□ -0.85
VPS52-220ENST00000493674 LGALS1P09382 135 aaKnown RBP9.75□□□□□ -0.85
VPS52-220ENST00000493674 H2AFB1P0C5Y9 115 aa9.75□□□□□ -0.85
VPS52-220ENST00000493674 STAG3L2P0CL84 134 aa9.75□□□□□ -0.85
VPS52-220ENST00000493674 STAG3L3P0CL85 134 aa9.75□□□□□ -0.85
VPS52-220ENST00000493674 PROK1P58294 105 aa9.75□□□□□ -0.85
VPS52-220ENST00000493674 PMS2P11Q13670 270 aa9.75□□□□□ -0.85
VPS52-220ENST00000493674 NDUFA5Q16718 116 aa9.75□□□□□ -0.85
VPS52-220ENST00000493674 SPATA31B1PQ5VZV4 182 aa9.75□□□□□ -0.85
VPS52-220ENST00000493674 OR4X2Q8NGF9 303 aa9.75□□□□□ -0.85
VPS52-220ENST00000493674 OR4F5Q8NH21 305 aa9.75□□□□□ -0.85
VPS52-220ENST00000493674 TMEM158Q8WZ71 300 aa9.75□□□□□ -0.85
VPS52-220ENST00000493674 RNF125Q96EQ8 232 aa9.75□□□□□ -0.85
VPS52-220ENST00000493674 SCRT1Q9BWW7 348 aa9.75□□□□□ -0.85
VPS52-220ENST00000493674 MAP1LC3BQ9GZQ8 125 aa9.75□□□□□ -0.85
VPS52-220ENST00000493674 GNB4Q9HAV0 340 aa9.75□□□□□ -0.85
VPS52-220ENST00000493674 SEPSECSQ9HD40 501 aaKnown RBP9.75□□□□□ -0.85
VPS52-220ENST00000493674 DNAJC4Q9NNZ3 241 aa9.75□□□□□ -0.85
VPS52-220ENST00000493674 NUDT19A8MXV4 375 aa9.74□□□□□ -0.85
VPS52-220ENST00000493674 PPP5D1E7EU14 171 aa9.74□□□□□ -0.85
VPS52-220ENST00000493674 COX7A2P2O60397 106 aa9.74□□□□□ -0.85
VPS52-220ENST00000493674 HYPMO75409 117 aa9.74□□□□□ -0.85
VPS52-220ENST00000493674 IGHV3-11P01762 117 aa9.74□□□□□ -0.85
VPS52-220ENST00000493674 HBE1P02100 147 aa9.74□□□□□ -0.85
VPS52-220ENST00000493674 S100A1P23297 94 aa9.74□□□□□ -0.85
VPS52-220ENST00000493674 ARL3P36405 182 aa9.74□□□□□ -0.85
VPS52-220ENST00000493674 CDX1P47902 265 aaPredicted RBP9.74□□□□□ -0.85
VPS52-220ENST00000493674 USF2Q15853 346 aaPredicted RBP9.74□□□□□ -0.85
VPS52-220ENST00000493674 MORN5Q5VZ52 161 aa9.74□□□□□ -0.85
VPS52-220ENST00000493674 C10orf113Q5VZT2 155 aa9.74□□□□□ -0.85
VPS52-220ENST00000493674 IL34Q6ZMJ4 242 aa9.74□□□□□ -0.85
VPS52-220ENST00000493674 MIR17HGQ75NE6 70 aa9.74□□□□□ -0.85
VPS52-220ENST00000493674 OR5AU1Q8NGC0 362 aa9.74□□□□□ -0.85
VPS52-220ENST00000493674 Q8WTZ3 238 aa9.74□□□□□ -0.85
VPS52-220ENST00000493674 FAM167A-AS1Q96KT0 104 aa9.74□□□□□ -0.85
VPS52-220ENST00000493674 CLPSL1A2RUU4 121 aa9.73□□□□□ -0.85
VPS52-220ENST00000493674 H3BRN7 92 aa9.73□□□□□ -0.85
VPS52-220ENST00000493674 I3L521 148 aa9.73□□□□□ -0.85
VPS52-220ENST00000493674 IL4P05112 153 aa9.73□□□□□ -0.85
VPS52-220ENST00000493674 LYZP61626 148 aa9.73□□□□□ -0.85
VPS52-220ENST00000493674 CCL20P78556 96 aa9.73□□□□□ -0.85
VPS52-220ENST00000493674 RELQ04864 619 aaPredicted RBP9.73□□□□□ -0.85
VPS52-220ENST00000493674 FAM78BQ5VT40 261 aa9.73□□□□□ -0.85
VPS52-220ENST00000493674 LCN15Q6UWW0 184 aa9.73□□□□□ -0.85
VPS52-220ENST00000493674 TOMM20LQ6UXN7 152 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms