RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 AURKAIP1Q9NWT8 199 aaPredicted RBP8.53□□□□□ -1.04
PHACTR4-204ENST00000493669 VWC2LB2RUY7 222 aa8.53□□□□□ -1.04
PHACTR4-204ENST00000493669 NPFFO15130 113 aa8.53□□□□□ -1.04
PHACTR4-204ENST00000493669 TOMM40O96008 361 aa8.53□□□□□ -1.04
PHACTR4-204ENST00000493669 IGKV1-17P01599 117 aa8.53□□□□□ -1.04
PHACTR4-204ENST00000493669 SMIM6P0DI80 62 aa8.53□□□□□ -1.04
PHACTR4-204ENST00000493669 RD3LP0DJH9 198 aa8.53□□□□□ -1.04
PHACTR4-204ENST00000493669 GP9P14770 177 aa8.53□□□□□ -1.04
PHACTR4-204ENST00000493669 SAA4P35542 130 aa8.53□□□□□ -1.04
PHACTR4-204ENST00000493669 CDX1P47902 265 aaPredicted RBP8.53□□□□□ -1.04
PHACTR4-204ENST00000493669 CNN1P51911 297 aaKnown RBP8.53□□□□□ -1.04
PHACTR4-204ENST00000493669 PAX8Q06710 450 aa8.53□□□□□ -1.04
PHACTR4-204ENST00000493669 ASPHD1Q5U4P2 390 aa8.53□□□□□ -1.04
PHACTR4-204ENST00000493669 Q8N9W7 124 aa8.53□□□□□ -1.04
PHACTR4-204ENST00000493669 SGMS2Q8NHU3 365 aa8.53□□□□□ -1.04
PHACTR4-204ENST00000493669 OSTCQ9NRP0 149 aa8.53□□□□□ -1.04
PHACTR4-204ENST00000493669 IL36BQ9NZH7 164 aa8.53□□□□□ -1.04
PHACTR4-204ENST00000493669 SCGB2A1O75556 95 aa8.52□□□□□ -1.04
PHACTR4-204ENST00000493669 GCGP01275 180 aa8.52□□□□□ -1.04
PHACTR4-204ENST00000493669 YPEL3P61236 119 aaPredicted RBP8.52□□□□□ -1.04
PHACTR4-204ENST00000493669 KLK9Q2XQG4 91 aa8.52□□□□□ -1.04
PHACTR4-204ENST00000493669 FBLN7Q53RD9 439 aa8.52□□□□□ -1.04
PHACTR4-204ENST00000493669 MRPL27Q9P0M9 148 aaKnown RBP8.52□□□□□ -1.04
PHACTR4-204ENST00000493669 KLK9Q9UKQ9 250 aa8.52□□□□□ -1.04
PHACTR4-204ENST00000493669 ZNF98A6NK75 572 aa8.52□□□□□ -1.05
PHACTR4-204ENST00000493669 PEX7O00628 323 aa8.52□□□□□ -1.05
PHACTR4-204ENST00000493669 MEOX2P50222 304 aa8.52□□□□□ -1.05
PHACTR4-204ENST00000493669 MFAP4P55083 255 aa8.52□□□□□ -1.05
PHACTR4-204ENST00000493669 NDUFA6P56556 154 aa8.52□□□□□ -1.05
PHACTR4-204ENST00000493669 LYZP61626 148 aa8.52□□□□□ -1.05
PHACTR4-204ENST00000493669 CLEC2AQ6UVW9 174 aa8.52□□□□□ -1.05
PHACTR4-204ENST00000493669 SMIM12Q96EX1 92 aa8.52□□□□□ -1.05
PHACTR4-204ENST00000493669 FANCD2OSQ96PS1 177 aa8.52□□□□□ -1.05
PHACTR4-204ENST00000493669 FAM103A1Q9BTL3 118 aaKnown RBP8.52□□□□□ -1.05
PHACTR4-204ENST00000493669 RNF24Q9Y225 148 aa8.52□□□□□ -1.05
PHACTR4-204ENST00000493669 DCHS2Q6V1P9 2916 aa8.52□□□□□ -1.05
PHACTR4-204ENST00000493669 IGHV7-81A0A0B4J1V7 117 aa8.52□□□□□ -1.05
PHACTR4-204ENST00000493669 ISLRO14498 428 aa8.52□□□□□ -1.05
PHACTR4-204ENST00000493669 S100A9P06702 114 aaKnown RBP8.52□□□□□ -1.05
PHACTR4-204ENST00000493669 NBEAP1P0C6P0 100 aa8.52□□□□□ -1.05
PHACTR4-204ENST00000493669 HIST1H1BP16401 226 aaKnown RBP8.52□□□□□ -1.05
PHACTR4-204ENST00000493669 NDPQ00604 133 aa8.52□□□□□ -1.05
PHACTR4-204ENST00000493669 ACTL10Q5JWF8 245 aa8.52□□□□□ -1.05
PHACTR4-204ENST00000493669 SLC25A39Q9BZJ4 359 aaPredicted RBP8.52□□□□□ -1.05
PHACTR4-204ENST00000493669 TMEM68Q96MH6 324 aa8.51□□□□□ -1.05
PHACTR4-204ENST00000493669 PITPNC1Q9UKF7 332 aa8.51□□□□□ -1.05
PHACTR4-204ENST00000493669 FCGR2BP31994 310 aaPredicted RBP8.51□□□□□ -1.05
PHACTR4-204ENST00000493669 ERVFC1-1P60608 527 aa8.51□□□□□ -1.05
PHACTR4-204ENST00000493669 TXN2Q99757 166 aa8.51□□□□□ -1.05
PHACTR4-204ENST00000493669 GSX1Q9H4S2 264 aaPredicted RBP8.51□□□□□ -1.05
PHACTR4-204ENST00000493669 CENPVL3A0A0U1RRI6 287 aa8.5□□□□□ -1.05
PHACTR4-204ENST00000493669 IGLV2-8P01709 118 aa8.5□□□□□ -1.05
PHACTR4-204ENST00000493669 HNF1AP20823 631 aa8.5□□□□□ -1.05
PHACTR4-204ENST00000493669 DSCR9P59020 149 aa8.5□□□□□ -1.05
PHACTR4-204ENST00000493669 RPL19P84098 196 aaKnown RBP8.5□□□□□ -1.05
PHACTR4-204ENST00000493669 C5orf17Q8NAS9 161 aa8.5□□□□□ -1.05
PHACTR4-204ENST00000493669 C12orf57Q99622 126 aa8.5□□□□□ -1.05
PHACTR4-204ENST00000493669 SHANK2-AS3Q9BTD1 123 aa8.5□□□□□ -1.05
PHACTR4-204ENST00000493669 V9GYV3 84 aa8.5□□□□□ -1.05
PHACTR4-204ENST00000493669 A0A0U1RQK1 487 aa8.5□□□□□ -1.05
PHACTR4-204ENST00000493669 WI2-2373I1.2A0A1W2PRP0 233 aa8.5□□□□□ -1.05
PHACTR4-204ENST00000493669 ZNF320A2RRD8 509 aa8.5□□□□□ -1.05
PHACTR4-204ENST00000493669 H3BRN7 92 aa8.5□□□□□ -1.05
PHACTR4-204ENST00000493669 GNG7O60262 68 aa8.5□□□□□ -1.05
PHACTR4-204ENST00000493669 HIST1H1EP10412 219 aaKnown RBP8.5□□□□□ -1.05
PHACTR4-204ENST00000493669 EGR2P11161 476 aaPredicted RBP8.5□□□□□ -1.05
PHACTR4-204ENST00000493669 PAX1P15863 534 aa8.5□□□□□ -1.05
PHACTR4-204ENST00000493669 TMEM183BQ1AE95 376 aa8.5□□□□□ -1.05
PHACTR4-204ENST00000493669 RPEL1Q2QD12 228 aa8.5□□□□□ -1.05
PHACTR4-204ENST00000493669 FAM110DQ8TAY7 271 aaPredicted RBP8.5□□□□□ -1.05
PHACTR4-204ENST00000493669 C21orf62Q9NYP8 219 aa8.5□□□□□ -1.05
PHACTR4-204ENST00000493669 EPDR1Q9UM22 224 aa8.5□□□□□ -1.05
PHACTR4-204ENST00000493669 KLF12Q9Y4X4 402 aa8.5□□□□□ -1.05
PHACTR4-204ENST00000493669 DOPEY1Q5JWR5 2465 aa8.5□□□□□ -1.05
PHACTR4-204ENST00000493669 IGHV4-61A0A0C4DH41 118 aa8.5□□□□□ -1.05
PHACTR4-204ENST00000493669 ATP5J2P56134 94 aa8.5□□□□□ -1.05
PHACTR4-204ENST00000493669 COA6Q5JTJ3 125 aaKnown RBP8.5□□□□□ -1.05
PHACTR4-204ENST00000493669 ZNF600Q6ZNG1 722 aa8.5□□□□□ -1.05
PHACTR4-204ENST00000493669 FAM231DQ6ZW35 169 aa8.5□□□□□ -1.05
PHACTR4-204ENST00000493669 RNF125Q96EQ8 232 aa8.5□□□□□ -1.05
PHACTR4-204ENST00000493669 RPL15P61313 204 aaKnown RBP8.49□□□□□ -1.05
PHACTR4-204ENST00000493669 RANP62826 216 aaKnown RBP8.49□□□□□ -1.05
PHACTR4-204ENST00000493669 FAM120AOSQ5T036 256 aa8.49□□□□□ -1.05
PHACTR4-204ENST00000493669 PIP4P2Q8N4L2 257 aa8.49□□□□□ -1.05
PHACTR4-204ENST00000493669 ZNF491Q8N8L2 437 aa8.49□□□□□ -1.05
PHACTR4-204ENST00000493669 VN1R17PQ8TDU5 208 aa8.49□□□□□ -1.05
PHACTR4-204ENST00000493669 ATG101Q9BSB4 218 aa8.49□□□□□ -1.05
PHACTR4-204ENST00000493669 OTORQ9NRC9 128 aa8.49□□□□□ -1.05
PHACTR4-204ENST00000493669 ACACBO00763 2458 aa8.49□□□□□ -1.05
PHACTR4-204ENST00000493669 IGHV1-69DA0A0B4J2H0 117 aa8.49□□□□□ -1.05
PHACTR4-204ENST00000493669 IGHV1-69P01742 117 aa8.49□□□□□ -1.05
PHACTR4-204ENST00000493669 SLC25A5P05141 298 aaKnown RBP8.49□□□□□ -1.05
PHACTR4-204ENST00000493669 CLEC12BQ2HXU8 276 aa8.49□□□□□ -1.05
PHACTR4-204ENST00000493669 BPIFA4PQ86YQ2 179 aa8.49□□□□□ -1.05
PHACTR4-204ENST00000493669 PGPA6NDG6 321 aa8.48□□□□□ -1.05
PHACTR4-204ENST00000493669 S100A7P31151 101 aa8.48□□□□□ -1.05
PHACTR4-204ENST00000493669 UBE2G1P62253 170 aa8.48□□□□□ -1.05
PHACTR4-204ENST00000493669 OR5I1Q13606 314 aa8.48□□□□□ -1.05
PHACTR4-204ENST00000493669 COX19Q49B96 90 aa8.48□□□□□ -1.05
PHACTR4-204ENST00000493669 KLF17Q5JT82 389 aaPredicted RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms