RNA–Protein interactions for RNA: ENST00000490435.5

ITGA4-211, Transcript of integrin subunit alpha 4, humanhuman

TSL 5

Gene ITGA4, Length 720 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-211ENST00000490435 ZFYVE9O95405 1425 aa0.42□□□□□ -2.34
ITGA4-211ENST00000490435 NCOA1Q15788 1441 aa0.42□□□□□ -2.34
ITGA4-211ENST00000490435 hCG_1818297A0A087WSY0 165 aa0.42□□□□□ -2.34
ITGA4-211ENST00000490435 A8MT66 165 aa0.42□□□□□ -2.34
ITGA4-211ENST00000490435 TCRBP04435 133 aa0.42□□□□□ -2.34
ITGA4-211ENST00000490435 AESQ08117 197 aa0.42□□□□□ -2.34
ITGA4-211ENST00000490435 EDDM3AQ14507 147 aa0.42□□□□□ -2.34
ITGA4-211ENST00000490435 Q8IYB0 196 aa0.42□□□□□ -2.34
ITGA4-211ENST00000490435 CLECL1Q8IZS7 167 aa0.42□□□□□ -2.34
ITGA4-211ENST00000490435 TEX47Q8TBZ9 253 aa0.42□□□□□ -2.34
ITGA4-211ENST00000490435 PATE1Q8WXA2 126 aa0.42□□□□□ -2.34
ITGA4-211ENST00000490435 BORCS5Q969J3 196 aa0.42□□□□□ -2.34
ITGA4-211ENST00000490435 PARVGQ9HBI0 331 aa0.42□□□□□ -2.34
ITGA4-211ENST00000490435 IDI2-AS1Q9NZ38 188 aa0.42□□□□□ -2.34
ITGA4-211ENST00000490435 UTP11Q9Y3A2 253 aaKnown RBP0.42□□□□□ -2.34
ITGA4-211ENST00000490435 PRELID3BQ9Y3B1 194 aa0.42□□□□□ -2.34
ITGA4-211ENST00000490435 CHD3Q12873 2000 aaKnown RBP0.42□□□□□ -2.34
ITGA4-211ENST00000490435 MYO3BQ8WXR4 1341 aa0.41□□□□□ -2.34
ITGA4-211ENST00000490435 C1orf196B1AJZ1 125 aa0.41□□□□□ -2.34
ITGA4-211ENST00000490435 CCL25O15444 150 aa0.41□□□□□ -2.34
ITGA4-211ENST00000490435 SERPINE1P05121 402 aa0.41□□□□□ -2.34
ITGA4-211ENST00000490435 C8GP07360 202 aa0.41□□□□□ -2.34
ITGA4-211ENST00000490435 PPIBP23284 216 aaKnown RBP0.41□□□□□ -2.34
ITGA4-211ENST00000490435 SRIP30626 198 aa0.41□□□□□ -2.34
ITGA4-211ENST00000490435 RNASE4P34096 147 aaKnown RBP0.41□□□□□ -2.34
ITGA4-211ENST00000490435 KRTAP21-1Q3LI58 79 aa0.41□□□□□ -2.34
ITGA4-211ENST00000490435 Q6Q795 121 aa0.41□□□□□ -2.34
ITGA4-211ENST00000490435 SLC25A40Q8TBP6 338 aa0.41□□□□□ -2.34
ITGA4-211ENST00000490435 BCL2L10Q9HD36 194 aa0.41□□□□□ -2.34
ITGA4-211ENST00000490435 C14orf132Q9NPU4 83 aa0.41□□□□□ -2.34
ITGA4-211ENST00000490435 UQCC1Q9NVA1 299 aa0.41□□□□□ -2.34
ITGA4-211ENST00000490435 ASCC3Q8N3C0 2202 aaKnown RBP0.41□□□□□ -2.34
ITGA4-211ENST00000490435 CCDC144AA2RUR9 1427 aa0.4□□□□□ -2.34
ITGA4-211ENST00000490435 CCL16O15467 120 aa0.4□□□□□ -2.35
ITGA4-211ENST00000490435 RPP14O95059 124 aaKnown RBP0.4□□□□□ -2.35
ITGA4-211ENST00000490435 HAND1O96004 215 aa0.4□□□□□ -2.35
ITGA4-211ENST00000490435 SMIM17P0DL12 118 aa0.4□□□□□ -2.35
ITGA4-211ENST00000490435 AP3S2P59780 193 aa0.4□□□□□ -2.35
ITGA4-211ENST00000490435 HIST1H3AP68431 136 aa0.4□□□□□ -2.35
ITGA4-211ENST00000490435 H3F3AP84243 136 aa0.4□□□□□ -2.35
ITGA4-211ENST00000490435 OR52L1Q8NGH7 329 aa0.4□□□□□ -2.35
ITGA4-211ENST00000490435 ITFG2Q969R8 447 aa0.4□□□□□ -2.35
ITGA4-211ENST00000490435 SLAMF6Q96DU3 332 aa0.4□□□□□ -2.35
ITGA4-211ENST00000490435 TVP23BQ9NYZ1 205 aa0.4□□□□□ -2.35
ITGA4-211ENST00000490435 MUC5ACP98088 5654 aa0.4□□□□□ -2.35
ITGA4-211ENST00000490435 CITO14578 2027 aa0.39□□□□□ -2.35
ITGA4-211ENST00000490435 TRBV6-4A0A1B0GX49 114 aa0.39□□□□□ -2.35
ITGA4-211ENST00000490435 NCR3O14931 201 aa0.39□□□□□ -2.35
ITGA4-211ENST00000490435 ANP32AP39687 249 aaKnown RBP0.39□□□□□ -2.35
ITGA4-211ENST00000490435 EFNA4P52798 201 aa0.39□□□□□ -2.35
ITGA4-211ENST00000490435 CEBPGP53567 150 aa0.39□□□□□ -2.35
ITGA4-211ENST00000490435 DYNLT1P63172 113 aa0.39□□□□□ -2.35
ITGA4-211ENST00000490435 PSG9Q00887 426 aa0.39□□□□□ -2.35
ITGA4-211ENST00000490435 SRSF6Q13247 344 aaKnown RBP0.39□□□□□ -2.35
ITGA4-211ENST00000490435 TMEM97Q5BJF2 176 aa0.39□□□□□ -2.35
ITGA4-211ENST00000490435 OR51A2Q8NGJ7 313 aa0.39□□□□□ -2.35
ITGA4-211ENST00000490435 OR2T10Q8NGZ9 312 aa0.39□□□□□ -2.35
ITGA4-211ENST00000490435 TRIM4Q9C037 500 aa0.39□□□□□ -2.35
ITGA4-211ENST00000490435 C6orf62Q9GZU0 229 aaPredicted RBP0.39□□□□□ -2.35
ITGA4-211ENST00000490435 RTL1A6NKG5 1358 aa0.39□□□□□ -2.35
ITGA4-211ENST00000490435 UNC13CQ8NB66 2214 aa0.38□□□□□ -2.35
ITGA4-211ENST00000490435 ZNF462Q96JM2 2506 aa0.38□□□□□ -2.35
ITGA4-211ENST00000490435 PHGR1C9JFL3 82 aa0.38□□□□□ -2.35
ITGA4-211ENST00000490435 J3QRK9 145 aa0.38□□□□□ -2.35
ITGA4-211ENST00000490435 CYB5BO43169 146 aa0.38□□□□□ -2.35
ITGA4-211ENST00000490435 PDE6DO43924 150 aa0.38□□□□□ -2.35
ITGA4-211ENST00000490435 GADD45GO95257 159 aa0.38□□□□□ -2.35
ITGA4-211ENST00000490435 DHFRP00374 187 aa0.38□□□□□ -2.35
ITGA4-211ENST00000490435 DEFA3P59666 94 aa0.38□□□□□ -2.35
ITGA4-211ENST00000490435 ITGB3BPQ13352 177 aaPredicted RBP0.38□□□□□ -2.35
ITGA4-211ENST00000490435 RGS21Q2M5E4 152 aa0.38□□□□□ -2.35
ITGA4-211ENST00000490435 PRADC1Q9BSG0 188 aa0.38□□□□□ -2.35
ITGA4-211ENST00000490435 UCK1Q9HA47 277 aa0.38□□□□□ -2.35
ITGA4-211ENST00000490435 FBXO5Q9UKT4 447 aa0.38□□□□□ -2.35
ITGA4-211ENST00000490435 PHRF1Q9P1Y6 1649 aaKnown RBP0.38□□□□□ -2.35
ITGA4-211ENST00000490435 SIP14410 1827 aa0.37□□□□□ -2.35
ITGA4-211ENST00000490435 A0A1W2PPM0 123 aa0.37□□□□□ -2.35
ITGA4-211ENST00000490435 DNAL4O96015 105 aa0.37□□□□□ -2.35
ITGA4-211ENST00000490435 RHOBP62745 196 aa0.37□□□□□ -2.35
ITGA4-211ENST00000490435 LINC00322Q6ZN03 302 aaPredicted RBP0.37□□□□□ -2.35
ITGA4-211ENST00000490435 SLC30A7Q8NEW0 376 aa0.37□□□□□ -2.35
ITGA4-211ENST00000490435 FAM172AQ8WUF8 416 aa0.37□□□□□ -2.35
ITGA4-211ENST00000490435 TMEM126AQ9H061 195 aa0.37□□□□□ -2.35
ITGA4-211ENST00000490435 GLTPQ9NZD2 209 aa0.37□□□□□ -2.35
ITGA4-211ENST00000490435 TRAV4A0A0B4J268 109 aa0.36□□□□□ -2.35
ITGA4-211ENST00000490435 FAM74A1Q5RGS3 127 aa0.36□□□□□ -2.35
ITGA4-211ENST00000490435 TMEM254Q8TBM7 123 aa0.36□□□□□ -2.35
ITGA4-211ENST00000490435 STAG3L4Q8TBR4 150 aa0.36□□□□□ -2.35
ITGA4-211ENST00000490435 PRAP1Q96NZ9 151 aa0.36□□□□□ -2.35
ITGA4-211ENST00000490435 C10orf95Q9H7T3 257 aa0.36□□□□□ -2.35
ITGA4-211ENST00000490435 GPR98Q8WXG9 6306 aa0.36□□□□□ -2.35
ITGA4-211ENST00000490435 TNS3Q68CZ2 1445 aa0.36□□□□□ -2.35
ITGA4-211ENST00000490435 IGHV1-58A0A0C4DH39 117 aa0.35□□□□□ -2.35
ITGA4-211ENST00000490435 TCRBV4S1A1TA0A5B7 111 aa0.35□□□□□ -2.35
ITGA4-211ENST00000490435 NUPR1O60356 82 aa0.35□□□□□ -2.35
ITGA4-211ENST00000490435 TIMM17BO60830 172 aa0.35□□□□□ -2.35
ITGA4-211ENST00000490435 CDKN2CP42773 168 aa0.35□□□□□ -2.35
ITGA4-211ENST00000490435 ROMO1P60602 79 aa0.35□□□□□ -2.35
ITGA4-211ENST00000490435 MYL6P60660 151 aa0.35□□□□□ -2.35
ITGA4-211ENST00000490435 EIF5AP63241 154 aaKnown RBP0.35□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms