RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 HEYLQ9NQ87 328 aaPredicted RBP9.83□□□□□ -0.84
VARS-227ENST00000489979 PSG1P11464 419 aa9.82□□□□□ -0.84
VARS-227ENST00000489979 ID1P41134 155 aa9.82□□□□□ -0.84
VARS-227ENST00000489979 RORCP51449 518 aa9.82□□□□□ -0.84
VARS-227ENST00000489979 PSG9Q00887 426 aa9.82□□□□□ -0.84
VARS-227ENST00000489979 ZNF79Q15937 498 aa9.82□□□□□ -0.84
VARS-227ENST00000489979 SPATA12Q7Z6I5 190 aa9.82□□□□□ -0.84
VARS-227ENST00000489979 LHFPL1Q86WI0 220 aa9.82□□□□□ -0.84
VARS-227ENST00000489979 OR52E5Q8NH55 327 aa9.82□□□□□ -0.84
VARS-227ENST00000489979 COQ8AQ8NI60 647 aa9.82□□□□□ -0.84
VARS-227ENST00000489979 TMEM170AQ8WVE7 144 aa9.82□□□□□ -0.84
VARS-227ENST00000489979 ACY3Q96HD9 319 aa9.82□□□□□ -0.84
VARS-227ENST00000489979 KLK11Q9UBX7 282 aa9.82□□□□□ -0.84
VARS-227ENST00000489979 FAT1Q14517 4588 aa9.82□□□□□ -0.84
VARS-227ENST00000489979 SMIM31A0A1B0GVY4 71 aa9.81□□□□□ -0.84
VARS-227ENST00000489979 F6UB75 175 aa9.81□□□□□ -0.84
VARS-227ENST00000489979 TNFAIP8O95379 198 aa9.81□□□□□ -0.84
VARS-227ENST00000489979 UCP1P25874 307 aa9.81□□□□□ -0.84
VARS-227ENST00000489979 PSMB3P49720 205 aa9.81□□□□□ -0.84
VARS-227ENST00000489979 AARDQ4LEZ3 155 aa9.81□□□□□ -0.84
VARS-227ENST00000489979 FAM78BQ5VT40 261 aa9.81□□□□□ -0.84
VARS-227ENST00000489979 ETFRF1Q6IPR1 90 aa9.81□□□□□ -0.84
VARS-227ENST00000489979 SLC24A4Q8NFF2 622 aa9.81□□□□□ -0.84
VARS-227ENST00000489979 RNF125Q96EQ8 232 aa9.81□□□□□ -0.84
VARS-227ENST00000489979 MAGT1Q9H0U3 335 aa9.81□□□□□ -0.84
VARS-227ENST00000489979 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.81□□□□□ -0.84
VARS-227ENST00000489979 COPZ2Q9P299 210 aa9.81□□□□□ -0.84
VARS-227ENST00000489979 SOCS3O14543 225 aa9.8□□□□□ -0.84
VARS-227ENST00000489979 NUDT3O95989 172 aa9.8□□□□□ -0.84
VARS-227ENST00000489979 SPATA31B1PQ5VZV4 182 aa9.8□□□□□ -0.84
VARS-227ENST00000489979 EBLN2Q6P2I7 272 aa9.8□□□□□ -0.84
VARS-227ENST00000489979 CCDC71LQ8N9Z2 235 aa9.8□□□□□ -0.84
VARS-227ENST00000489979 PBDC1Q9BVG4 233 aa9.8□□□□□ -0.84
VARS-227ENST00000489979 COMMD3Q9UBI1 195 aa9.8□□□□□ -0.84
VARS-227ENST00000489979 CEBPZOSA8MTT3 80 aa9.79□□□□□ -0.84
VARS-227ENST00000489979 PRM2P04554 102 aa9.79□□□□□ -0.84
VARS-227ENST00000489979 NUP62P37198 522 aaPredicted RBP9.79□□□□□ -0.84
VARS-227ENST00000489979 ALDH3B2P48448 385 aa9.79□□□□□ -0.84
VARS-227ENST00000489979 PAX9P55771 341 aa9.79□□□□□ -0.84
VARS-227ENST00000489979 LSM3P62310 102 aaKnown RBP9.79□□□□□ -0.84
VARS-227ENST00000489979 RNASE12Q5GAN4 147 aaKnown RBP9.79□□□□□ -0.84
VARS-227ENST00000489979 FAM219AQ8IW50 185 aa9.79□□□□□ -0.84
VARS-227ENST00000489979 GPR146Q96CH1 333 aa9.79□□□□□ -0.84
VARS-227ENST00000489979 TMEM208Q9BTX3 173 aa9.79□□□□□ -0.84
VARS-227ENST00000489979 CACNG5Q9UF02 275 aa9.79□□□□□ -0.84
VARS-227ENST00000489979 A0A087WXM4 84 aa9.78□□□□□ -0.84
VARS-227ENST00000489979 A0A0J9YX75 114 aa9.78□□□□□ -0.84
VARS-227ENST00000489979 APOA1P02647 267 aa9.78□□□□□ -0.84
VARS-227ENST00000489979 RNASE10Q5GAN6 216 aaKnown RBP9.78□□□□□ -0.84
VARS-227ENST00000489979 OR8G2PQ6IF36 304 aa9.78□□□□□ -0.84
VARS-227ENST00000489979 OR13C8Q8NGS7 320 aa9.78□□□□□ -0.84
VARS-227ENST00000489979 LHFPL5Q8TAF8 219 aa9.78□□□□□ -0.84
VARS-227ENST00000489979 ZFAND1Q8TCF1 268 aa9.78□□□□□ -0.84
VARS-227ENST00000489979 PFDN2Q9UHV9 154 aa9.78□□□□□ -0.84
VARS-227ENST00000489979 LINC00588Q9Y4M8 146 aa9.78□□□□□ -0.84
VARS-227ENST00000489979 LYRM9A8MSI8 78 aa9.77□□□□□ -0.85
VARS-227ENST00000489979 ZNF705GA8MUZ8 300 aaPredicted RBP9.77□□□□□ -0.85
VARS-227ENST00000489979 F5H768 121 aa9.77□□□□□ -0.85
VARS-227ENST00000489979 CDS2O95674 445 aa9.77□□□□□ -0.85
VARS-227ENST00000489979 CD3DP04234 171 aa9.77□□□□□ -0.85
VARS-227ENST00000489979 OR5AC1P0C628 307 aa9.77□□□□□ -0.85
VARS-227ENST00000489979 DEFB130BP0DP73 79 aa9.77□□□□□ -0.85
VARS-227ENST00000489979 DEFB130AP0DP74 79 aa9.77□□□□□ -0.85
VARS-227ENST00000489979 CCL18P55774 89 aa9.77□□□□□ -0.85
VARS-227ENST00000489979 SUPT4H1P63272 117 aaKnown RBP9.77□□□□□ -0.85
VARS-227ENST00000489979 ARRDC1Q8N5I2 433 aa9.77□□□□□ -0.85
VARS-227ENST00000489979 C20orf173Q96LM9 149 aa9.77□□□□□ -0.85
VARS-227ENST00000489979 IGF2BP2-AS1Q96M15 143 aa9.77□□□□□ -0.85
VARS-227ENST00000489979 ISLRO14498 428 aa9.76□□□□□ -0.85
VARS-227ENST00000489979 B3GALNT1O75752 331 aa9.76□□□□□ -0.85
VARS-227ENST00000489979 ELK1P19419 428 aa9.76□□□□□ -0.85
VARS-227ENST00000489979 KRTAP10-2P60368 255 aa9.76□□□□□ -0.85
VARS-227ENST00000489979 ZNF90Q03938 601 aa9.76□□□□□ -0.85
VARS-227ENST00000489979 KLF9Q13886 244 aaPredicted RBP9.76□□□□□ -0.85
VARS-227ENST00000489979 MEF2DQ14814 521 aa9.76□□□□□ -0.85
VARS-227ENST00000489979 NMSQ5H8A3 153 aa9.76□□□□□ -0.85
VARS-227ENST00000489979 C1orf194Q5T5A4 169 aa9.76□□□□□ -0.85
VARS-227ENST00000489979 AMTNQ6UX39 209 aa9.76□□□□□ -0.85
VARS-227ENST00000489979 NOXA1Q86UR1 476 aa9.76□□□□□ -0.85
VARS-227ENST00000489979 SELENOHQ8IZQ5 122 aaKnown RBP9.76□□□□□ -0.85
VARS-227ENST00000489979 OR4D10Q8NGI6 311 aa9.76□□□□□ -0.85
VARS-227ENST00000489979 TERB2Q8NHR7 220 aa9.76□□□□□ -0.85
VARS-227ENST00000489979 MARCH1Q8TCQ1 289 aa9.76□□□□□ -0.85
VARS-227ENST00000489979 GLYATL2Q8WU03 294 aa9.76□□□□□ -0.85
VARS-227ENST00000489979 RBPMSQ93062 196 aaKnown RBP9.76□□□□□ -0.85
VARS-227ENST00000489979 TMEM222Q9H0R3 208 aa9.76□□□□□ -0.85
VARS-227ENST00000489979 RPRMQ9NS64 109 aa9.76□□□□□ -0.85
VARS-227ENST00000489979 DOK5Q9P104 306 aa9.76□□□□□ -0.85
VARS-227ENST00000489979 DMBT1Q9UGM3 2413 aaPredicted RBP9.76□□□□□ -0.85
VARS-227ENST00000489979 ZFP92A6NM28 416 aa9.75□□□□□ -0.85
VARS-227ENST00000489979 A8MTW9 85 aa9.75□□□□□ -0.85
VARS-227ENST00000489979 HPGDSO60760 199 aa9.75□□□□□ -0.85
VARS-227ENST00000489979 LYZP61626 148 aa9.75□□□□□ -0.85
VARS-227ENST00000489979 FCN2Q15485 313 aa9.75□□□□□ -0.85
VARS-227ENST00000489979 SCGB2B2Q4G0G5 96 aa9.75□□□□□ -0.85
VARS-227ENST00000489979 OR8I2Q8N0Y5 310 aa9.75□□□□□ -0.85
VARS-227ENST00000489979 PPP1R14BQ96C90 147 aa9.75□□□□□ -0.85
VARS-227ENST00000489979 C16orf92Q96LL3 132 aa9.75□□□□□ -0.85
VARS-227ENST00000489979 ABHD1Q96SE0 405 aa9.75□□□□□ -0.85
VARS-227ENST00000489979 IGKV1D-37A0A075B6S9 117 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms