RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 YIPF3Q9GZM5 350 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 OR8D2Q9GZM6 311 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 MAP1LC3BQ9GZQ8 125 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 RNASE7Q9H1E1 156 aaKnown RBP0.6□□□□□ -2.31
CCDC39-206ENST00000489868 CISHQ9NSE2 258 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 LYRM2Q9NU23 88 aaPredicted RBP0.6□□□□□ -2.31
CCDC39-206ENST00000489868 C14orf105Q9NVL8 296 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 MED29Q9NX70 200 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 SPANXCQ9NY87 97 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 COA4Q9NYJ1 87 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 COPZ2Q9P299 210 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 RSL24D1Q9UHA3 163 aaKnown RBP0.6□□□□□ -2.31
CCDC39-206ENST00000489868 HSPB8Q9UJY1 196 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 GNG8Q9UK08 70 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 JPT1Q9UK76 154 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 SSR3Q9UNL2 185 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 PKIGQ9Y2B9 76 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 MUC5BQ9HC84 5762 aaPredicted RBP0.6□□□□□ -2.31
CCDC39-206ENST00000489868 SYNMO15061 1565 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 PIK3C2GO75747 1445 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 WRNQ14191 1432 aaPredicted RBP eCLIP0.59□□□□□ -2.31
CCDC39-206ENST00000489868 NCOA1Q15788 1441 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 UHRF1BP1Q6BDS2 1440 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 PPIP5K1Q6PFW1 1433 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 SMG6Q86US8 1419 aaKnown RBP0.59□□□□□ -2.31
CCDC39-206ENST00000489868 YTHDC2Q9H6S0 1430 aaKnown RBP0.59□□□□□ -2.31
CCDC39-206ENST00000489868 A0A096LPI6 279 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 BORCS7-ASMTA0A0B4J1R7 106 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 PVALEFA0A1B0GWK0 134 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 C20orf202A1L168 122 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 FAM92AA1XBS5 289 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 C9orf170A2RU37 121 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 TMEM189A5PLL7 270 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 RIIAD1A6NNX1 92 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 F6UZH7 168 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 H7C1C5 153 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 J3KT08 172 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 AIPO00170 330 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 DEGS1O15121 323 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 SLC22A1O15245 554 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 GNG7O60262 68 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 TNFSF15O95150 251 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 GADD45GO95257 159 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 NDUFC2O95298 119 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 IGF2P01344 180 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 APOA2P02652 100 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 C1QBP02746 253 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 SERPINE1P05121 402 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 DBIP07108 87 aaKnown RBP0.59□□□□□ -2.31
CCDC39-206ENST00000489868 TSPAN19P0C672 248 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 METTL15P1P0C7V9 234 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 UBBP0CG47 229 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 MPC1LP0DKB6 136 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 FGF6P10767 208 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 ZNF25P17030 456 aaPredicted RBP0.59□□□□□ -2.31
CCDC39-206ENST00000489868 SPI1P17947 270 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 DDTP30046 118 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 RPL35P42766 123 aaKnown RBP0.59□□□□□ -2.31
CCDC39-206ENST00000489868 RBP2P50120 134 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 DEFA1P59665 94 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 RPS20P60866 119 aaKnown RBP0.59□□□□□ -2.31
CCDC39-206ENST00000489868 NCALDP61601 193 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 RRAS2P62070 204 aaPredicted RBP0.59□□□□□ -2.31
CCDC39-206ENST00000489868 LCN6P62502 163 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 MRPS10P82664 201 aaKnown RBP0.59□□□□□ -2.31
CCDC39-206ENST00000489868 EMX2Q04743 252 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 PMAIP1Q13794 54 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 RHEBQ15382 184 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 OR8B8Q15620 311 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 GRK1Q15835 563 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 KCNJ8Q15842 424 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 NEDD8Q15843 81 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 LTC4SQ16873 150 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 IAH1Q2TAA2 248 aaPredicted RBP0.59□□□□□ -2.31
CCDC39-206ENST00000489868 C12orf74Q32Q52 190 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 RNASE10Q5GAN6 216 aaKnown RBP0.59□□□□□ -2.31
CCDC39-206ENST00000489868 TNFAIP8L3Q5GJ75 292 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 C1orf194Q5T5A4 169 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 SCIMPQ6UWF3 145 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 SBSNQ6UWP8 590 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 ALKAL1Q6UXT8 129 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 GOLT1AQ6ZVE7 132 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 ZNF550Q7Z398 422 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 C20orf196Q8IYI0 205 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 TSTD1Q8NFU3 115 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 OR11H6Q8NGC7 330 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 OR8B3Q8NGG8 313 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 OR2T4Q8NH00 348 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 OR2T27Q8NH04 317 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 OR4C6Q8NH72 309 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 JOSD2Q8TAC2 188 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 GNPDA2Q8TDQ7 276 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 THEM6Q8WUY1 208 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 CANT1Q8WVQ1 401 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 KLK6Q92876 244 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 ARL11Q969Q4 196 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 ROPN1LQ96C74 230 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 GPR146Q96CH1 333 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 MALSU1Q96EH3 234 aa0.59□□□□□ -2.31
CCDC39-206ENST00000489868 CNBD2Q96M20 576 aa0.59□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms