RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 TM2D3Q9BRN9 247 aa12.95□□□□□ -0.34
MDC1-206ENST00000489540 WFDC10AQ9H1F0 79 aa12.95□□□□□ -0.34
MDC1-206ENST00000489540 PFDN2Q9UHV9 154 aa12.95□□□□□ -0.34
MDC1-206ENST00000489540 U3KQE9 123 aa12.95□□□□□ -0.34
MDC1-206ENST00000489540 IGKV3-7A0A075B6H7 116 aa12.94□□□□□ -0.34
MDC1-206ENST00000489540 IGKV1D-37A0A075B6S9 117 aa12.94□□□□□ -0.34
MDC1-206ENST00000489540 RPL11P62913 178 aaKnown RBP12.94□□□□□ -0.34
MDC1-206ENST00000489540 TMEM14EPQ6UXP3 125 aa12.94□□□□□ -0.34
MDC1-206ENST00000489540 THAP8Q8NA92 274 aa12.94□□□□□ -0.34
MDC1-206ENST00000489540 MARVELD1Q9BSK0 173 aa12.94□□□□□ -0.34
MDC1-206ENST00000489540 RCL1Q9Y2P8 373 aaKnown RBP12.94□□□□□ -0.34
MDC1-206ENST00000489540 TRAV2A0A0B4J234 112 aa12.93□□□□□ -0.34
MDC1-206ENST00000489540 RBMY1BA6NDE4 496 aaKnown RBP12.93□□□□□ -0.34
MDC1-206ENST00000489540 RBMY1EA6NEQ0 496 aaKnown RBP12.93□□□□□ -0.34
MDC1-206ENST00000489540 DNASE2O00115 360 aaPredicted RBP12.93□□□□□ -0.34
MDC1-206ENST00000489540 CFDP00746 253 aaPredicted RBP12.93□□□□□ -0.34
MDC1-206ENST00000489540 RBMY1DP0C7P1 496 aaKnown RBP12.93□□□□□ -0.34
MDC1-206ENST00000489540 P2RY1P47900 373 aa12.93□□□□□ -0.34
MDC1-206ENST00000489540 EIF2B2P49770 351 aaKnown RBP12.93□□□□□ -0.34
MDC1-206ENST00000489540 ZNF90Q03938 601 aa12.93□□□□□ -0.34
MDC1-206ENST00000489540 USF2Q15853 346 aaPredicted RBP12.93□□□□□ -0.34
MDC1-206ENST00000489540 OR8G2PQ6IF36 304 aa12.93□□□□□ -0.34
MDC1-206ENST00000489540 GBGT1Q8N5D6 347 aa12.93□□□□□ -0.34
MDC1-206ENST00000489540 RABAC1Q9UI14 185 aa12.93□□□□□ -0.34
MDC1-206ENST00000489540 C7orf66A4D0T2 115 aa12.92□□□□□ -0.34
MDC1-206ENST00000489540 PMS2P5A8MQ11 134 aa12.92□□□□□ -0.34
MDC1-206ENST00000489540 L7N2F9 121 aa12.92□□□□□ -0.34
MDC1-206ENST00000489540 NUP62P37198 522 aaPredicted RBP12.92□□□□□ -0.34
MDC1-206ENST00000489540 TFPI2P48307 235 aa12.92□□□□□ -0.34
MDC1-206ENST00000489540 AP2S1P53680 142 aaPredicted RBP12.92□□□□□ -0.34
MDC1-206ENST00000489540 VAMP2P63027 116 aa12.92□□□□□ -0.34
MDC1-206ENST00000489540 ACOT7LQ6ZUV0 252 aa12.92□□□□□ -0.34
MDC1-206ENST00000489540 TMEM144Q7Z5S9 345 aa12.92□□□□□ -0.34
MDC1-206ENST00000489540 OR10P1Q8NGE3 313 aa12.92□□□□□ -0.34
MDC1-206ENST00000489540 RNF125Q96EQ8 232 aa12.92□□□□□ -0.34
MDC1-206ENST00000489540 SPATA25Q9BR10 227 aa12.92□□□□□ -0.34
MDC1-206ENST00000489540 MS4A6AQ9H2W1 248 aa12.92□□□□□ -0.34
MDC1-206ENST00000489540 UBQLN2Q9UHD9 624 aa12.92□□□□□ -0.34
MDC1-206ENST00000489540 HELTA6NFD8 242 aa12.91□□□□□ -0.34
MDC1-206ENST00000489540 METTL15P1P0C7V9 234 aa12.91□□□□□ -0.34
MDC1-206ENST00000489540 AKR1C1Q04828 323 aa12.91□□□□□ -0.34
MDC1-206ENST00000489540 ODF3L2Q3SX64 289 aa12.91□□□□□ -0.34
MDC1-206ENST00000489540 C16orf54Q6UWD8 224 aa12.91□□□□□ -0.34
MDC1-206ENST00000489540 RCHY1Q96PM5 261 aa12.91□□□□□ -0.34
MDC1-206ENST00000489540 PBDC1Q9BVG4 233 aa12.91□□□□□ -0.34
MDC1-206ENST00000489540 LSM5Q9Y4Y9 91 aaKnown RBP12.91□□□□□ -0.34
MDC1-206ENST00000489540 IGKV1OR2-108A0A075B7D4 117 aa12.9□□□□□ -0.34
MDC1-206ENST00000489540 LOC102724200A0A096LPH7 203 aaPredicted RBP12.9□□□□□ -0.34
MDC1-206ENST00000489540 FNDC10F2Z333 226 aa12.9□□□□□ -0.34
MDC1-206ENST00000489540 K7EPK0 472 aa12.9□□□□□ -0.34
MDC1-206ENST00000489540 BUB3O43684 328 aa12.9□□□□□ -0.34
MDC1-206ENST00000489540 PVALBP20472 110 aaPredicted RBP12.9□□□□□ -0.34
MDC1-206ENST00000489540 DLK1P80370 383 aa12.9□□□□□ -0.34
MDC1-206ENST00000489540 IL15RAQ13261 267 aa12.9□□□□□ -0.34
MDC1-206ENST00000489540 WFDC3Q8IUB2 231 aa12.9□□□□□ -0.34
MDC1-206ENST00000489540 WWC2-AS2Q96NR7 200 aa12.9□□□□□ -0.34
MDC1-206ENST00000489540 GGTLC1Q9BX51 225 aa12.9□□□□□ -0.34
MDC1-206ENST00000489540 SMCO3A2RU48 225 aa12.89□□□□□ -0.35
MDC1-206ENST00000489540 LYZP61626 148 aa12.89□□□□□ -0.35
MDC1-206ENST00000489540 OR2F1Q13607 317 aa12.89□□□□□ -0.35
MDC1-206ENST00000489540 GLMPQ8WWB7 406 aa12.89□□□□□ -0.35
MDC1-206ENST00000489540 CITED4Q96RK1 184 aa12.89□□□□□ -0.35
MDC1-206ENST00000489540 GGACTQ9BVM4 153 aa12.89□□□□□ -0.35
MDC1-206ENST00000489540 NPVFQ9HCQ7 196 aa12.89□□□□□ -0.35
MDC1-206ENST00000489540 BCAP31P51572 246 aa12.88□□□□□ -0.35
MDC1-206ENST00000489540 BPIFCQ8NFQ6 507 aa12.88□□□□□ -0.35
MDC1-206ENST00000489540 STXBP6Q8NFX7 210 aa12.88□□□□□ -0.35
MDC1-206ENST00000489540 MGAT4CQ9UBM8 478 aa12.88□□□□□ -0.35
MDC1-206ENST00000489540 HUWE1Q7Z6Z7 4374 aaKnown RBP12.88□□□□□ -0.35
MDC1-206ENST00000489540 DEDDO75618 318 aa12.88□□□□□ -0.35
MDC1-206ENST00000489540 CCNKO75909 580 aa12.88□□□□□ -0.35
MDC1-206ENST00000489540 S100A7P31151 101 aa12.88□□□□□ -0.35
MDC1-206ENST00000489540 CAV2P51636 162 aa12.88□□□□□ -0.35
MDC1-206ENST00000489540 S100A10P60903 97 aa12.88□□□□□ -0.35
MDC1-206ENST00000489540 RRAS2P62070 204 aaPredicted RBP12.88□□□□□ -0.35
MDC1-206ENST00000489540 CYCSP99999 105 aaKnown RBP12.88□□□□□ -0.35
MDC1-206ENST00000489540 RAB32Q13637 225 aa12.88□□□□□ -0.35
MDC1-206ENST00000489540 C1orf194Q5T5A4 169 aa12.88□□□□□ -0.35
MDC1-206ENST00000489540 MAP6D1Q9H9H5 199 aa12.88□□□□□ -0.35
MDC1-206ENST00000489540 K7EQG2 157 aa12.87□□□□□ -0.35
MDC1-206ENST00000489540 GOSR2O14653 212 aa12.87□□□□□ -0.35
MDC1-206ENST00000489540 APOC4P55056 127 aa12.87□□□□□ -0.35
MDC1-206ENST00000489540 C11orf1Q9H5F2 150 aa12.87□□□□□ -0.35
MDC1-206ENST00000489540 SLC45A2Q9UMX9 530 aa12.87□□□□□ -0.35
MDC1-206ENST00000489540 KIR2DL5BA0A0G2JN68 375 aa12.86□□□□□ -0.35
MDC1-206ENST00000489540 KIR2DL5BA0A0G2JPC4 375 aa12.86□□□□□ -0.35
MDC1-206ENST00000489540 RLN2P04090 185 aa12.86□□□□□ -0.35
MDC1-206ENST00000489540 SELENOTP62341 195 aa12.86□□□□□ -0.35
MDC1-206ENST00000489540 ARL16Q0P5N6 197 aa12.86□□□□□ -0.35
MDC1-206ENST00000489540 TEPPQ6URK8 271 aa12.86□□□□□ -0.35
MDC1-206ENST00000489540 SIGLEC15Q6ZMC9 328 aa12.86□□□□□ -0.35
MDC1-206ENST00000489540 CYP2G1PQ6ZSU1 146 aa12.86□□□□□ -0.35
MDC1-206ENST00000489540 APRG1Q8IVJ8 170 aa12.86□□□□□ -0.35
MDC1-206ENST00000489540 KIR2DL5AQ8N109 375 aa12.86□□□□□ -0.35
MDC1-206ENST00000489540 KIR2DL5BQ8NHK3 375 aa12.86□□□□□ -0.35
MDC1-206ENST00000489540 DCANP1Q8TF63 244 aa12.86□□□□□ -0.35
MDC1-206ENST00000489540 PPP1R14BQ96C90 147 aa12.86□□□□□ -0.35
MDC1-206ENST00000489540 NMES1Q9C002 83 aa12.86□□□□□ -0.35
MDC1-206ENST00000489540 FBXL17Q9UF56 701 aa12.86□□□□□ -0.35
MDC1-206ENST00000489540 FAM24AA6NFZ4 105 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms