RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 ZNF616Q08AN1 781 aa10.97□□□□□ -0.65
CLDN11-209ENST00000489485 UQCC3Q6UW78 93 aa10.97□□□□□ -0.65
CLDN11-209ENST00000489485 OR4F17Q8NGA8 305 aa10.97□□□□□ -0.65
CLDN11-209ENST00000489485 OR4F4Q96R69 305 aa10.97□□□□□ -0.65
CLDN11-209ENST00000489485 VWFP04275 2813 aa10.96□□□□□ -0.65
CLDN11-209ENST00000489485 IGKV1D-37A0A075B6S9 117 aa10.96□□□□□ -0.65
CLDN11-209ENST00000489485 IGHV3-35A0A0C4DH35 117 aa10.96□□□□□ -0.65
CLDN11-209ENST00000489485 LINC01619G3V211 115 aa10.96□□□□□ -0.65
CLDN11-209ENST00000489485 TEX46H3BTG2 121 aa10.96□□□□□ -0.65
CLDN11-209ENST00000489485 BMPR1BO00238 502 aa10.96□□□□□ -0.65
CLDN11-209ENST00000489485 NUPL2O15504 423 aaKnown RBP10.96□□□□□ -0.65
CLDN11-209ENST00000489485 TGOLN2O43493 480 aa10.96□□□□□ -0.65
CLDN11-209ENST00000489485 PF4P02776 101 aa10.96□□□□□ -0.65
CLDN11-209ENST00000489485 CTSGP08311 255 aa10.96□□□□□ -0.65
CLDN11-209ENST00000489485 FCGR2BP31994 310 aaPredicted RBP10.96□□□□□ -0.65
CLDN11-209ENST00000489485 ZNF90Q03938 601 aa10.96□□□□□ -0.65
CLDN11-209ENST00000489485 SMUG1Q53HV7 270 aa10.96□□□□□ -0.65
CLDN11-209ENST00000489485 ARL6IP6Q8N6S5 226 aa10.96□□□□□ -0.65
CLDN11-209ENST00000489485 MGST2Q99735 147 aa10.96□□□□□ -0.65
CLDN11-209ENST00000489485 RSG1Q9BU20 258 aa10.96□□□□□ -0.65
CLDN11-209ENST00000489485 NPCDR1Q9BY65 106 aa10.96□□□□□ -0.65
CLDN11-209ENST00000489485 RFNGQ9Y644 331 aa10.96□□□□□ -0.65
CLDN11-209ENST00000489485 M0QZ24 198 aa10.95□□□□□ -0.66
CLDN11-209ENST00000489485 AGPAT2O15120 278 aa10.95□□□□□ -0.66
CLDN11-209ENST00000489485 GGCTO75223 188 aaKnown RBP10.95□□□□□ -0.66
CLDN11-209ENST00000489485 IGLC1P0CG04 106 aa10.95□□□□□ -0.66
CLDN11-209ENST00000489485 CAMLGP49069 296 aa10.95□□□□□ -0.66
CLDN11-209ENST00000489485 RPEL1Q2QD12 228 aa10.95□□□□□ -0.66
CLDN11-209ENST00000489485 THAP8Q8NA92 274 aa10.95□□□□□ -0.66
CLDN11-209ENST00000489485 ATP6V0BQ99437 205 aa10.95□□□□□ -0.66
CLDN11-209ENST00000489485 CHRDL1Q9BU40 450 aa10.95□□□□□ -0.66
CLDN11-209ENST00000489485 SCGB2A1O75556 95 aa10.95□□□□□ -0.66
CLDN11-209ENST00000489485 OR2C1O95371 312 aa10.95□□□□□ -0.66
CLDN11-209ENST00000489485 IGKV1-17P01599 117 aa10.95□□□□□ -0.66
CLDN11-209ENST00000489485 GATA2P23769 480 aaPredicted RBP10.95□□□□□ -0.66
CLDN11-209ENST00000489485 ATP6V0CP27449 155 aa10.95□□□□□ -0.66
CLDN11-209ENST00000489485 HOXD3P31249 432 aaPredicted RBP10.95□□□□□ -0.66
CLDN11-209ENST00000489485 ADMP35318 185 aa10.95□□□□□ -0.66
CLDN11-209ENST00000489485 TIGITQ495A1 244 aa10.95□□□□□ -0.66
CLDN11-209ENST00000489485 SPSB3Q6PJ21 355 aa10.95□□□□□ -0.66
CLDN11-209ENST00000489485 STOML3Q8TAV4 291 aa10.95□□□□□ -0.66
CLDN11-209ENST00000489485 SH3BGRL3Q9H299 93 aa10.95□□□□□ -0.66
CLDN11-209ENST00000489485 TRAV30A0A087WSZ9 112 aa10.94□□□□□ -0.66
CLDN11-209ENST00000489485 RAB19A4D1S5 217 aa10.94□□□□□ -0.66
CLDN11-209ENST00000489485 TSPAN4O14817 238 aa10.94□□□□□ -0.66
CLDN11-209ENST00000489485 MPDU1O75352 247 aa10.94□□□□□ -0.66
CLDN11-209ENST00000489485 TPT1P13693 172 aaKnown RBP10.94□□□□□ -0.66
CLDN11-209ENST00000489485 SLURP1P55000 103 aa10.94□□□□□ -0.66
CLDN11-209ENST00000489485 BTN1A1Q13410 526 aa10.94□□□□□ -0.66
CLDN11-209ENST00000489485 RAB31Q13636 194 aa10.94□□□□□ -0.66
CLDN11-209ENST00000489485 TMEM182Q6ZP80 229 aaPredicted RBP10.94□□□□□ -0.66
CLDN11-209ENST00000489485 BAP18Q8IXM2 172 aa10.94□□□□□ -0.66
CLDN11-209ENST00000489485 ZNF709Q8N972 641 aa10.94□□□□□ -0.66
CLDN11-209ENST00000489485 SPATA3Q8NHX4 192 aa10.94□□□□□ -0.66
CLDN11-209ENST00000489485 PARD6GQ9BYG4 376 aaPredicted RBP10.94□□□□□ -0.66
CLDN11-209ENST00000489485 ATF4P18848 351 aaPredicted RBP10.93□□□□□ -0.66
CLDN11-209ENST00000489485 MYCNOSP40205 109 aa10.93□□□□□ -0.66
CLDN11-209ENST00000489485 FHL3Q13643 280 aa10.93□□□□□ -0.66
CLDN11-209ENST00000489485 PXDC1Q5TGL8 231 aa10.93□□□□□ -0.66
CLDN11-209ENST00000489485 TRGV9Q99603 122 aa10.93□□□□□ -0.66
CLDN11-209ENST00000489485 GINS3Q9BRX5 216 aa10.93□□□□□ -0.66
CLDN11-209ENST00000489485 GGTLC1Q9BX51 225 aa10.93□□□□□ -0.66
CLDN11-209ENST00000489485 YIF1AO95070 293 aa10.93□□□□□ -0.66
CLDN11-209ENST00000489485 TSPAN15O95858 294 aa10.93□□□□□ -0.66
CLDN11-209ENST00000489485 EIF5AP63241 154 aaKnown RBP10.93□□□□□ -0.66
CLDN11-209ENST00000489485 MIC13Q5XKP0 118 aa10.93□□□□□ -0.66
CLDN11-209ENST00000489485 CYP2G1PQ6ZSU1 146 aa10.93□□□□□ -0.66
CLDN11-209ENST00000489485 BPIFCQ8NFQ6 507 aa10.93□□□□□ -0.66
CLDN11-209ENST00000489485 ARV1Q9H2C2 271 aa10.93□□□□□ -0.66
CLDN11-209ENST00000489485 TRRAPQ9Y4A5 3859 aa10.93□□□□□ -0.66
CLDN11-209ENST00000489485 ZNF320A2RRD8 509 aa10.92□□□□□ -0.66
CLDN11-209ENST00000489485 C17orf112F2Z3M2 114 aa10.92□□□□□ -0.66
CLDN11-209ENST00000489485 PSG1P11464 419 aa10.92□□□□□ -0.66
CLDN11-209ENST00000489485 RELQ04864 619 aaPredicted RBP10.92□□□□□ -0.66
CLDN11-209ENST00000489485 MARC2Q969Z3 335 aa10.92□□□□□ -0.66
CLDN11-209ENST00000489485 GNPNAT1Q96EK6 184 aaPredicted RBP10.92□□□□□ -0.66
CLDN11-209ENST00000489485 SLC45A2Q9UMX9 530 aa10.92□□□□□ -0.66
CLDN11-209ENST00000489485 APOC3P02656 99 aa10.91□□□□□ -0.66
CLDN11-209ENST00000489485 RD3LP0DJH9 198 aa10.91□□□□□ -0.66
CLDN11-209ENST00000489485 SYNJ2BPP57105 145 aa10.91□□□□□ -0.66
CLDN11-209ENST00000489485 FAM106AQ4KMX7 169 aa10.91□□□□□ -0.66
CLDN11-209ENST00000489485 FAM122CQ6P4D5 195 aa10.91□□□□□ -0.66
CLDN11-209ENST00000489485 STPG3Q8N7X2 389 aa10.91□□□□□ -0.66
CLDN11-209ENST00000489485 OR2G3Q8NGZ4 309 aa10.91□□□□□ -0.66
CLDN11-209ENST00000489485 TMED6Q8WW62 240 aa10.91□□□□□ -0.66
CLDN11-209ENST00000489485 DLX4Q92988 240 aaPredicted RBP10.91□□□□□ -0.66
CLDN11-209ENST00000489485 PXMP4Q9Y6I8 212 aa10.91□□□□□ -0.66
CLDN11-209ENST00000489485 IGHV3OR16-8A0A075B7F1 116 aa10.91□□□□□ -0.66
CLDN11-209ENST00000489485 SPP1P10451 314 aa10.91□□□□□ -0.66
CLDN11-209ENST00000489485 RPL29P47914 159 aaKnown RBP10.91□□□□□ -0.66
CLDN11-209ENST00000489485 YPEL3P61236 119 aaPredicted RBP10.91□□□□□ -0.66
CLDN11-209ENST00000489485 B2MP61769 119 aa10.91□□□□□ -0.66
CLDN11-209ENST00000489485 GPHB5Q86YW7 130 aa10.91□□□□□ -0.66
CLDN11-209ENST00000489485 RNF141Q8WVD5 230 aa10.91□□□□□ -0.66
CLDN11-209ENST00000489485 PUS1Q9Y606 427 aaKnown RBP eCLIP10.91□□□□□ -0.66
CLDN11-209ENST00000489485 TOMM40O96008 361 aa10.9□□□□□ -0.66
CLDN11-209ENST00000489485 LINC00869P0C866 280 aa10.9□□□□□ -0.66
CLDN11-209ENST00000489485 ELLP55199 621 aaPredicted RBP10.9□□□□□ -0.66
CLDN11-209ENST00000489485 SELENOTP62341 195 aa10.9□□□□□ -0.66
CLDN11-209ENST00000489485 PRR20EP86478 221 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms