RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 PBOV1Q9GZY1 135 aa1.69□□□□□ -2.14
XRN1-213ENST00000489241 NHP2Q9NX24 153 aaKnown RBP1.69□□□□□ -2.14
XRN1-213ENST00000489241 PCTPQ9UKL6 214 aa1.69□□□□□ -2.14
XRN1-213ENST00000489241 STRCQ7RTU9 1775 aa1.69□□□□□ -2.14
XRN1-213ENST00000489241 ECM29Q5VYK3 1845 aa1.68□□□□□ -2.14
XRN1-213ENST00000489241 DOCK10Q96BY6 2186 aa1.68□□□□□ -2.14
XRN1-213ENST00000489241 PLXND1Q9Y4D7 1925 aa1.68□□□□□ -2.14
XRN1-213ENST00000489241 TRGV2A0A075B6R0 118 aa1.68□□□□□ -2.14
XRN1-213ENST00000489241 TRAV3A0A0B4J244 114 aa1.68□□□□□ -2.14
XRN1-213ENST00000489241 FUOMA2VDF0 154 aa1.68□□□□□ -2.14
XRN1-213ENST00000489241 PPP5D1E7EU14 171 aa1.68□□□□□ -2.14
XRN1-213ENST00000489241 J3QKU1 62 aa1.68□□□□□ -2.14
XRN1-213ENST00000489241 TMEM256-PLSCR3K7ERE1 68 aa1.68□□□□□ -2.14
XRN1-213ENST00000489241 CSN2P05814 226 aa1.68□□□□□ -2.14
XRN1-213ENST00000489241 MGST1P10620 155 aaKnown RBP1.68□□□□□ -2.14
XRN1-213ENST00000489241 MIFP14174 115 aa1.68□□□□□ -2.14
XRN1-213ENST00000489241 IDO1P14902 403 aa1.68□□□□□ -2.14
XRN1-213ENST00000489241 GLRXP35754 106 aa1.68□□□□□ -2.14
XRN1-213ENST00000489241 SCGB2B2Q4G0G5 96 aa1.68□□□□□ -2.14
XRN1-213ENST00000489241 RNASE10Q5GAN6 216 aaKnown RBP1.68□□□□□ -2.14
XRN1-213ENST00000489241 C22orf39Q6P5X5 142 aa1.68□□□□□ -2.14
XRN1-213ENST00000489241 OR2T10Q8NGZ9 312 aa1.68□□□□□ -2.14
XRN1-213ENST00000489241 YPEL2Q96QA6 119 aa1.68□□□□□ -2.14
XRN1-213ENST00000489241 MRPL32Q9BYC8 188 aaKnown RBP1.68□□□□□ -2.14
XRN1-213ENST00000489241 OR2J1Q9GZK6 312 aa1.68□□□□□ -2.14
XRN1-213ENST00000489241 BCL2L10Q9HD36 194 aa1.68□□□□□ -2.14
XRN1-213ENST00000489241 SMPXQ9UHP9 88 aa1.68□□□□□ -2.14
XRN1-213ENST00000489241 SLC35A3Q9Y2D2 325 aa1.68□□□□□ -2.14
XRN1-213ENST00000489241 CCDC88AQ3V6T2 1871 aa1.68□□□□□ -2.14
XRN1-213ENST00000489241 SYNMO15061 1565 aa1.68□□□□□ -2.14
XRN1-213ENST00000489241 GBF1Q92538 1859 aa1.67□□□□□ -2.14
XRN1-213ENST00000489241 RIMBP3CA6NJZ7 1639 aa1.67□□□□□ -2.14
XRN1-213ENST00000489241 RIMBP3BA6NNM3 1639 aa1.67□□□□□ -2.14
XRN1-213ENST00000489241 RIMBP3Q9UFD9 1639 aa1.67□□□□□ -2.14
XRN1-213ENST00000489241 COL5A3P25940 1745 aaPredicted RBP1.67□□□□□ -2.14
XRN1-213ENST00000489241 TRGV10A0A0A0MS01 117 aa1.67□□□□□ -2.14
XRN1-213ENST00000489241 TRBV6-5A0A0K0K1A5 114 aa1.67□□□□□ -2.14
XRN1-213ENST00000489241 F8W036 122 aa1.67□□□□□ -2.14
XRN1-213ENST00000489241 PIAS1O75925 651 aa1.67□□□□□ -2.14
XRN1-213ENST00000489241 BAALC-AS2P0C853 105 aa1.67□□□□□ -2.14
XRN1-213ENST00000489241 SSR2P43308 183 aa1.67□□□□□ -2.14
XRN1-213ENST00000489241 INSL3P51460 131 aa1.67□□□□□ -2.14
XRN1-213ENST00000489241 UBE2BP63146 152 aa1.67□□□□□ -2.14
XRN1-213ENST00000489241 SOSTDC1Q6X4U4 206 aa1.67□□□□□ -2.14
XRN1-213ENST00000489241 PDZD9Q8IXQ8 264 aa1.67□□□□□ -2.14
XRN1-213ENST00000489241 SLC30A7Q8NEW0 376 aa1.67□□□□□ -2.14
XRN1-213ENST00000489241 CANT1Q8WVQ1 401 aa1.67□□□□□ -2.14
XRN1-213ENST00000489241 MALSU1Q96EH3 234 aa1.67□□□□□ -2.14
XRN1-213ENST00000489241 GPER1Q99527 375 aa1.67□□□□□ -2.14
XRN1-213ENST00000489241 TMEM70Q9BUB7 260 aa1.67□□□□□ -2.14
XRN1-213ENST00000489241 UHRF1BP1Q6BDS2 1440 aa1.66□□□□□ -2.14
XRN1-213ENST00000489241 NDUFB3O43676 98 aa1.66□□□□□ -2.14
XRN1-213ENST00000489241 GGCTO75223 188 aaKnown RBP1.66□□□□□ -2.14
XRN1-213ENST00000489241 UBL3O95164 117 aa1.66□□□□□ -2.14
XRN1-213ENST00000489241 NFYBP25208 207 aa1.66□□□□□ -2.14
XRN1-213ENST00000489241 ESRGQ1W209 222 aa1.66□□□□□ -2.14
XRN1-213ENST00000489241 PHF13Q86YI8 300 aaPredicted RBP1.66□□□□□ -2.14
XRN1-213ENST00000489241 LINC00311Q8N616 119 aa1.66□□□□□ -2.14
XRN1-213ENST00000489241 ZNF563Q8TA94 476 aa1.66□□□□□ -2.14
XRN1-213ENST00000489241 CENPHQ9H3R5 247 aa1.66□□□□□ -2.14
XRN1-213ENST00000489241 HS3ST2Q9Y278 367 aa1.66□□□□□ -2.14
XRN1-213ENST00000489241 MYH11P35749 1972 aa1.66□□□□□ -2.14
XRN1-213ENST00000489241 RTTNQ86VV8 2226 aa1.65□□□□□ -2.15
XRN1-213ENST00000489241 C2orf70A6NJV1 201 aa1.65□□□□□ -2.15
XRN1-213ENST00000489241 GPR31O00270 319 aa1.65□□□□□ -2.15
XRN1-213ENST00000489241 GADD45GO95257 159 aa1.65□□□□□ -2.15
XRN1-213ENST00000489241 APOA2P02652 100 aa1.65□□□□□ -2.15
XRN1-213ENST00000489241 DYNLT3P51808 116 aa1.65□□□□□ -2.15
XRN1-213ENST00000489241 LTC4SQ16873 150 aa1.65□□□□□ -2.15
XRN1-213ENST00000489241 Q8IYB0 196 aa1.65□□□□□ -2.15
XRN1-213ENST00000489241 PLEKHB2Q96CS7 222 aa1.65□□□□□ -2.15
XRN1-213ENST00000489241 TEX37Q96LM6 180 aa1.65□□□□□ -2.15
XRN1-213ENST00000489241 GPX7Q96SL4 187 aaPredicted RBP1.65□□□□□ -2.15
XRN1-213ENST00000489241 CRCT1Q9UGL9 99 aa1.65□□□□□ -2.15
XRN1-213ENST00000489241 YTHDC2Q9H6S0 1430 aaKnown RBP1.65□□□□□ -2.15
XRN1-213ENST00000489241 BRWD1Q9NSI6 2320 aa1.65□□□□□ -2.15
XRN1-213ENST00000489241 A0A1B0GV72 72 aa1.64□□□□□ -2.15
XRN1-213ENST00000489241 TIMM17BO60830 172 aa1.64□□□□□ -2.15
XRN1-213ENST00000489241 LYZL6O75951 148 aa1.64□□□□□ -2.15
XRN1-213ENST00000489241 TRGC2P03986 189 aa1.64□□□□□ -2.15
XRN1-213ENST00000489241 CRHP06850 196 aa1.64□□□□□ -2.15
XRN1-213ENST00000489241 OGNP20774 298 aaKnown RBP1.64□□□□□ -2.15
XRN1-213ENST00000489241 RHOGP84095 191 aa1.64□□□□□ -2.15
XRN1-213ENST00000489241 C10orf55Q5SWW7 151 aa1.64□□□□□ -2.15
XRN1-213ENST00000489241 TMEM78Q5T7P6 136 aa1.64□□□□□ -2.15
XRN1-213ENST00000489241 RPS19BP1Q86WX3 136 aaKnown RBP1.64□□□□□ -2.15
XRN1-213ENST00000489241 Q8N2B8 174 aa1.64□□□□□ -2.15
XRN1-213ENST00000489241 FAM24BQ8N5W8 94 aa1.64□□□□□ -2.15
XRN1-213ENST00000489241 NUP35Q8NFH5 326 aa1.64□□□□□ -2.15
XRN1-213ENST00000489241 ZNF418Q8TF45 676 aaPredicted RBP1.64□□□□□ -2.15
XRN1-213ENST00000489241 CCDC88CQ9P219 2028 aa1.64□□□□□ -2.15
XRN1-213ENST00000489241 ARHGEF28Q8N1W1 1705 aaKnown RBP1.63□□□□□ -2.15
XRN1-213ENST00000489241 TRAV14DV4A0A0A6YYC5 116 aa1.63□□□□□ -2.15
XRN1-213ENST00000489241 MAP1LC3B2A6NCE7 125 aa1.63□□□□□ -2.15
XRN1-213ENST00000489241 H0YJX3 145 aa1.63□□□□□ -2.15
XRN1-213ENST00000489241 OR1I1O60431 355 aa1.63□□□□□ -2.15
XRN1-213ENST00000489241 RNASE3P12724 160 aaKnown RBP1.63□□□□□ -2.15
XRN1-213ENST00000489241 PDE6HQ13956 83 aa1.63□□□□□ -2.15
XRN1-213ENST00000489241 DEFB113Q30KQ7 82 aa1.63□□□□□ -2.15
XRN1-213ENST00000489241 DCUN1D2Q6PH85 259 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms