RNA–Protein interactions for RNA: ENST00000489212.2

LIME1-207, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 559 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-207ENST00000489212 STXBP6Q8NFX7 210 aa15.6■□□□□ 0.09
LIME1-207ENST00000489212 OR51G1Q8NGK1 321 aa15.6■□□□□ 0.09
LIME1-207ENST00000489212 OR4D5Q8NGN0 318 aa15.6■□□□□ 0.09
LIME1-207ENST00000489212 GLMPQ8WWB7 406 aa15.6■□□□□ 0.09
LIME1-207ENST00000489212 C20orf85Q9H1P6 137 aa15.6■□□□□ 0.09
LIME1-207ENST00000489212 ZFP92A6NM28 416 aa15.59■□□□□ 0.09
LIME1-207ENST00000489212 K7EQG2 157 aa15.59■□□□□ 0.09
LIME1-207ENST00000489212 UBE2CO00762 179 aa15.59■□□□□ 0.09
LIME1-207ENST00000489212 POLR2GP62487 172 aaKnown RBP eCLIP15.59■□□□□ 0.09
LIME1-207ENST00000489212 CNPY1Q3B7I2 92 aa15.59■□□□□ 0.09
LIME1-207ENST00000489212 LEMD1Q68G75 181 aa15.59■□□□□ 0.09
LIME1-207ENST00000489212 STPG3Q8N7X2 389 aa15.59■□□□□ 0.09
LIME1-207ENST00000489212 DCANP1Q8TF63 244 aa15.59■□□□□ 0.09
LIME1-207ENST00000489212 GRAMD2BQ96HH9 432 aa15.59■□□□□ 0.09
LIME1-207ENST00000489212 CCDC32Q9BV29 185 aa15.59■□□□□ 0.09
LIME1-207ENST00000489212 AGRNO00468 2067 aa15.58■□□□□ 0.09
LIME1-207ENST00000489212 IGKV1OR2-108A0A075B7D4 117 aa15.58■□□□□ 0.08
LIME1-207ENST00000489212 A6NHS1 94 aa15.58■□□□□ 0.08
LIME1-207ENST00000489212 H3BP45 60 aa15.58■□□□□ 0.08
LIME1-207ENST00000489212 IFNA21P01568 189 aa15.58■□□□□ 0.08
LIME1-207ENST00000489212 SPANXN5Q5MJ07 72 aa15.58■□□□□ 0.08
LIME1-207ENST00000489212 MITD1Q8WV92 249 aa15.58■□□□□ 0.08
LIME1-207ENST00000489212 RNF125Q96EQ8 232 aa15.58■□□□□ 0.08
LIME1-207ENST00000489212 TP53TG1Q9Y2A0 90 aa15.58■□□□□ 0.08
LIME1-207ENST00000489212 SPRY2O43597 315 aa15.57■□□□□ 0.08
LIME1-207ENST00000489212 BUB3O43684 328 aa15.57■□□□□ 0.08
LIME1-207ENST00000489212 TCRBP04435 133 aa15.57■□□□□ 0.08
LIME1-207ENST00000489212 NKX2-1P43699 371 aaPredicted RBP15.57■□□□□ 0.08
LIME1-207ENST00000489212 RPP30P78346 268 aaKnown RBP15.57■□□□□ 0.08
LIME1-207ENST00000489212 LINC00299Q6ZSB3 139 aa15.57■□□□□ 0.08
LIME1-207ENST00000489212 RNF183Q96D59 192 aa15.57■□□□□ 0.08
LIME1-207ENST00000489212 THAP8Q8NA92 274 aa15.56■□□□□ 0.08
LIME1-207ENST00000489212 TRGV9Q99603 122 aa15.56■□□□□ 0.08
LIME1-207ENST00000489212 PBDC1Q9BVG4 233 aa15.56■□□□□ 0.08
LIME1-207ENST00000489212 CSTL1Q9H114 145 aa15.56■□□□□ 0.08
LIME1-207ENST00000489212 RYR2Q92736 4967 aa15.56■□□□□ 0.08
LIME1-207ENST00000489212 TRAV6A0A075B6T7 132 aa15.55■□□□□ 0.08
LIME1-207ENST00000489212 HELTA6NFD8 242 aa15.55■□□□□ 0.08
LIME1-207ENST00000489212 SSSCA1O60232 199 aa15.55■□□□□ 0.08
LIME1-207ENST00000489212 ZNF688P0C7X2 276 aa15.55■□□□□ 0.08
LIME1-207ENST00000489212 OR2F1Q13607 317 aa15.55■□□□□ 0.08
LIME1-207ENST00000489212 STRAPQ9Y3F4 350 aaKnown RBP15.55■□□□□ 0.08
LIME1-207ENST00000489212 EIF2B2P49770 351 aaKnown RBP15.54■□□□□ 0.08
LIME1-207ENST00000489212 PAX9P55771 341 aa15.54■□□□□ 0.08
LIME1-207ENST00000489212 IAH1Q2TAA2 248 aaPredicted RBP15.54■□□□□ 0.08
LIME1-207ENST00000489212 ZBTB8BQ8NAP8 495 aaPredicted RBP15.54■□□□□ 0.08
LIME1-207ENST00000489212 NUDT15Q9NV35 164 aa15.54■□□□□ 0.08
LIME1-207ENST00000489212 PSENENQ9NZ42 101 aa15.54■□□□□ 0.08
LIME1-207ENST00000489212 TBC1D24Q9ULP9 559 aa15.54■□□□□ 0.08
LIME1-207ENST00000489212 PLECQ15149 4684 aaKnown RBP15.53■□□□□ 0.08
LIME1-207ENST00000489212 AP2S1P53680 142 aaPredicted RBP15.53■□□□□ 0.08
LIME1-207ENST00000489212 LYZP61626 148 aa15.53■□□□□ 0.08
LIME1-207ENST00000489212 OR8G2PQ6IF36 304 aa15.53■□□□□ 0.08
LIME1-207ENST00000489212 SIGLEC15Q6ZMC9 328 aa15.53■□□□□ 0.08
LIME1-207ENST00000489212 ACOT7LQ6ZUV0 252 aa15.53■□□□□ 0.08
LIME1-207ENST00000489212 SEC22CQ9BRL7 303 aa15.53■□□□□ 0.08
LIME1-207ENST00000489212 A0A0J9YWU9 116 aa15.52■□□□□ 0.08
LIME1-207ENST00000489212 PMS2P5A8MQ11 134 aa15.52■□□□□ 0.08
LIME1-207ENST00000489212 SNRPGP15A8MWD9 76 aa15.52■□□□□ 0.08
LIME1-207ENST00000489212 CCSO14618 274 aa15.52■□□□□ 0.08
LIME1-207ENST00000489212 CCNKO75909 580 aa15.52■□□□□ 0.08
LIME1-207ENST00000489212 EWSR1Q01844 656 aaKnown RBP eCLIP15.52■□□□□ 0.08
LIME1-207ENST00000489212 S100ZQ8WXG8 99 aa15.52■□□□□ 0.08
LIME1-207ENST00000489212 SMIM8Q96KF7 97 aa15.52■□□□□ 0.08
LIME1-207ENST00000489212 KNCNA6PVL3 124 aa15.51■□□□□ 0.07
LIME1-207ENST00000489212 SCGB1D2O95969 90 aa15.51■□□□□ 0.07
LIME1-207ENST00000489212 FABP1P07148 127 aa15.51■□□□□ 0.07
LIME1-207ENST00000489212 TMEM182Q6ZP80 229 aaPredicted RBP15.51■□□□□ 0.07
LIME1-207ENST00000489212 NRN1Q9NPD7 142 aa15.51■□□□□ 0.07
LIME1-207ENST00000489212 GSKIPQ9P0R6 139 aa15.51■□□□□ 0.07
LIME1-207ENST00000489212 RCL1Q9Y2P8 373 aaKnown RBP15.51■□□□□ 0.07
LIME1-207ENST00000489212 DNAH1Q9P2D7 4330 aa15.5■□□□□ 0.07
LIME1-207ENST00000489212 H2AFB2P0C5Z0 115 aa15.5■□□□□ 0.07
LIME1-207ENST00000489212 GATA2P23769 480 aaPredicted RBP15.5■□□□□ 0.07
LIME1-207ENST00000489212 TMEM14EPQ6UXP3 125 aa15.5■□□□□ 0.07
LIME1-207ENST00000489212 TRPT1Q86TN4 253 aaKnown RBP15.5■□□□□ 0.07
LIME1-207ENST00000489212 STHQ8IWL8 128 aa15.5■□□□□ 0.07
LIME1-207ENST00000489212 IL17DQ8TAD2 202 aa15.5■□□□□ 0.07
LIME1-207ENST00000489212 ZNF431Q8TF32 576 aaPredicted RBP15.5■□□□□ 0.07
LIME1-207ENST00000489212 FAM240BA0A1B0GVZ2 78 aa15.49■□□□□ 0.07
LIME1-207ENST00000489212 CA1P00915 261 aaPredicted RBP15.49■□□□□ 0.07
LIME1-207ENST00000489212 MBPP02686 304 aaPredicted RBP15.49■□□□□ 0.07
LIME1-207ENST00000489212 GIG44P09565 113 aaPredicted RBP15.49■□□□□ 0.07
LIME1-207ENST00000489212 AKR1C1Q04828 323 aa15.49■□□□□ 0.07
LIME1-207ENST00000489212 ASAH1Q13510 395 aa15.49■□□□□ 0.07
LIME1-207ENST00000489212 PSMG4Q5JS54 123 aa15.49■□□□□ 0.07
LIME1-207ENST00000489212 METTL15P1P0C7V9 234 aa15.48■□□□□ 0.07
LIME1-207ENST00000489212 NUP62P37198 522 aaPredicted RBP15.48■□□□□ 0.07
LIME1-207ENST00000489212 ACTL10Q5JWF8 245 aa15.48■□□□□ 0.07
LIME1-207ENST00000489212 GSG1LQ6UXU4 331 aa15.48■□□□□ 0.07
LIME1-207ENST00000489212 TMEM144Q7Z5S9 345 aa15.48■□□□□ 0.07
LIME1-207ENST00000489212 RAB40CQ96S21 281 aa15.48■□□□□ 0.07
LIME1-207ENST00000489212 PTTG2Q9NZH5 202 aa15.48■□□□□ 0.07
LIME1-207ENST00000489212 IFITM3Q01628 133 aa15.47■□□□□ 0.07
LIME1-207ENST00000489212 C1orf194Q5T5A4 169 aa15.47■□□□□ 0.07
LIME1-207ENST00000489212 C12orf45Q8N5I9 185 aaPredicted RBP15.47■□□□□ 0.07
LIME1-207ENST00000489212 GATAD1Q8WUU5 269 aa15.47■□□□□ 0.07
LIME1-207ENST00000489212 WDR12Q9GZL7 423 aaKnown RBP15.47■□□□□ 0.07
LIME1-207ENST00000489212 PFDN2Q9UHV9 154 aa15.47■□□□□ 0.07
LIME1-207ENST00000489212 SMCO3A2RU48 225 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms