RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 GGTLC3B5MD39 225 aa14.7□□□□□ -0.06
COL16A1-215ENST00000488897 DLX1P56177 255 aa14.7□□□□□ -0.06
COL16A1-215ENST00000488897 TOMM20LQ6UXN7 152 aa14.7□□□□□ -0.06
COL16A1-215ENST00000488897 OR9G1Q8NH87 305 aa14.7□□□□□ -0.06
COL16A1-215ENST00000488897 HSPB9Q9BQS6 159 aa14.7□□□□□ -0.06
COL16A1-215ENST00000488897 SNHG12Q9BXW3 62 aa14.7□□□□□ -0.06
COL16A1-215ENST00000488897 NAT8BQ9UHF3 227 aa14.7□□□□□ -0.06
COL16A1-215ENST00000488897 YLPM1P49750 1951 aaKnown RBP14.7□□□□□ -0.06
COL16A1-215ENST00000488897 NKX6-3A6NJ46 265 aa14.7□□□□□ -0.06
COL16A1-215ENST00000488897 MLANAQ16655 118 aa14.7□□□□□ -0.06
COL16A1-215ENST00000488897 SAMD10Q9BYL1 202 aa14.7□□□□□ -0.06
COL16A1-215ENST00000488897 RNASE7Q9H1E1 156 aaKnown RBP14.7□□□□□ -0.06
COL16A1-215ENST00000488897 NDUFA4L2Q9NRX3 87 aa14.7□□□□□ -0.06
COL16A1-215ENST00000488897 INS-IGF2F8WCM5 200 aa14.69□□□□□ -0.06
COL16A1-215ENST00000488897 MEF2CQ06413 473 aaPredicted RBP14.69□□□□□ -0.06
COL16A1-215ENST00000488897 TEX43Q6ZNM6 134 aa14.69□□□□□ -0.06
COL16A1-215ENST00000488897 HARBI1Q96MB7 349 aa14.69□□□□□ -0.06
COL16A1-215ENST00000488897 SONP18583 2426 aaKnown RBP14.69□□□□□ -0.06
COL16A1-215ENST00000488897 ABCA1O95477 2261 aa14.69□□□□□ -0.06
COL16A1-215ENST00000488897 FRMD6-AS1P0C7T7 363 aa14.68□□□□□ -0.06
COL16A1-215ENST00000488897 TPTE2P1Q5T6R2 138 aa14.68□□□□□ -0.06
COL16A1-215ENST00000488897 OR10W1Q8NGF6 305 aa14.68□□□□□ -0.06
COL16A1-215ENST00000488897 BEX4Q9NWD9 120 aaPredicted RBP14.68□□□□□ -0.06
COL16A1-215ENST00000488897 TCAPO15273 167 aa14.68□□□□□ -0.06
COL16A1-215ENST00000488897 RPL8P62917 257 aaKnown RBP14.68□□□□□ -0.06
COL16A1-215ENST00000488897 TMEM177Q53S58 311 aa14.68□□□□□ -0.06
COL16A1-215ENST00000488897 OR10J3Q5JRS4 329 aa14.68□□□□□ -0.06
COL16A1-215ENST00000488897 IBA57Q5T440 356 aaKnown RBP14.68□□□□□ -0.06
COL16A1-215ENST00000488897 ZNF714Q96N38 554 aa14.68□□□□□ -0.06
COL16A1-215ENST00000488897 C20orf144Q9BQM9 153 aa14.68□□□□□ -0.06
COL16A1-215ENST00000488897 MRPL20Q9BYC9 149 aaKnown RBP14.68□□□□□ -0.06
COL16A1-215ENST00000488897 DNAJC4Q9NNZ3 241 aa14.68□□□□□ -0.06
COL16A1-215ENST00000488897 ZNRD1Q9P1U0 126 aa14.68□□□□□ -0.06
COL16A1-215ENST00000488897 A0A1W2PN81 502 aa14.67□□□□□ -0.06
COL16A1-215ENST00000488897 IGLV2-8P01709 118 aa14.67□□□□□ -0.06
COL16A1-215ENST00000488897 RAB4AP20338 218 aa14.67□□□□□ -0.06
COL16A1-215ENST00000488897 BRS3P32247 399 aa14.67□□□□□ -0.06
COL16A1-215ENST00000488897 TMEM136Q6ZRR5 245 aa14.67□□□□□ -0.06
COL16A1-215ENST00000488897 MRPL52Q86TS9 123 aaKnown RBP14.67□□□□□ -0.06
COL16A1-215ENST00000488897 SIGLECL1Q8N7X8 197 aa14.67□□□□□ -0.06
COL16A1-215ENST00000488897 IGF2BP2-AS1Q96M15 143 aa14.67□□□□□ -0.06
COL16A1-215ENST00000488897 SMR3AQ99954 134 aa14.67□□□□□ -0.06
COL16A1-215ENST00000488897 TEP1Q99973 2627 aaKnown RBP14.67□□□□□ -0.06
COL16A1-215ENST00000488897 H0YJW9 148 aa14.67□□□□□ -0.06
COL16A1-215ENST00000488897 USF1P22415 310 aaPredicted RBP14.67□□□□□ -0.06
COL16A1-215ENST00000488897 ZFP36P26651 326 aaKnown RBP14.67□□□□□ -0.06
COL16A1-215ENST00000488897 OR5AN1Q8NGI8 311 aa14.67□□□□□ -0.06
COL16A1-215ENST00000488897 FLYWCH2Q96CP2 140 aaKnown RBP14.67□□□□□ -0.06
COL16A1-215ENST00000488897 GNB4Q9HAV0 340 aa14.67□□□□□ -0.06
COL16A1-215ENST00000488897 SMIM27A0A1W2PRY6 76 aa14.66□□□□□ -0.06
COL16A1-215ENST00000488897 MGST1P10620 155 aaKnown RBP14.66□□□□□ -0.06
COL16A1-215ENST00000488897 CD33P20138 364 aa14.66□□□□□ -0.06
COL16A1-215ENST00000488897 FXYD3Q14802 87 aa14.66□□□□□ -0.06
COL16A1-215ENST00000488897 TMEM183BQ1AE95 376 aa14.66□□□□□ -0.06
COL16A1-215ENST00000488897 OR4A5Q8NH83 315 aa14.66□□□□□ -0.06
COL16A1-215ENST00000488897 FAM167A-AS1Q96KT0 104 aa14.66□□□□□ -0.06
COL16A1-215ENST00000488897 PSMB11A5LHX3 300 aa14.66□□□□□ -0.06
COL16A1-215ENST00000488897 F2Z2F3 143 aa14.66□□□□□ -0.06
COL16A1-215ENST00000488897 HLA-DQA1P01909 254 aa14.66□□□□□ -0.06
COL16A1-215ENST00000488897 AMY1AP04745 511 aa14.66□□□□□ -0.06
COL16A1-215ENST00000488897 OR2T6Q8NHC8 308 aa14.66□□□□□ -0.06
COL16A1-215ENST00000488897 VSTM2AQ8TAG5 236 aa14.66□□□□□ -0.06
COL16A1-215ENST00000488897 NEU1Q99519 415 aa14.66□□□□□ -0.06
COL16A1-215ENST00000488897 PIMREGQ9BSJ6 248 aa14.66□□□□□ -0.06
COL16A1-215ENST00000488897 SLC25A2Q9BXI2 301 aa14.66□□□□□ -0.06
COL16A1-215ENST00000488897 CDC42EP3Q9UKI2 254 aa14.66□□□□□ -0.06
COL16A1-215ENST00000488897 CR1P17927 2039 aa14.66□□□□□ -0.06
COL16A1-215ENST00000488897 M0QZK8 103 aa14.65□□□□□ -0.06
COL16A1-215ENST00000488897 SPINK4O60575 86 aa14.65□□□□□ -0.06
COL16A1-215ENST00000488897 GPX1P07203 203 aa14.65□□□□□ -0.06
COL16A1-215ENST00000488897 FOSL1P15407 271 aa14.65□□□□□ -0.06
COL16A1-215ENST00000488897 UBE2L3P68036 154 aaKnown RBP14.65□□□□□ -0.06
COL16A1-215ENST00000488897 OR1L4Q8NGR5 311 aa14.65□□□□□ -0.06
COL16A1-215ENST00000488897 MBD6Q96DN6 1003 aa14.65□□□□□ -0.06
COL16A1-215ENST00000488897 TIMD4Q96H15 378 aa14.65□□□□□ -0.06
COL16A1-215ENST00000488897 VWC2LB2RUY7 222 aa14.65□□□□□ -0.06
COL16A1-215ENST00000488897 SUB1P53999 127 aaKnown RBP eCLIP14.65□□□□□ -0.06
COL16A1-215ENST00000488897 ZNF705AQ6ZN79 300 aaPredicted RBP14.65□□□□□ -0.06
COL16A1-215ENST00000488897 TMEM167AQ8TBQ9 72 aa14.65□□□□□ -0.06
COL16A1-215ENST00000488897 MIEN1Q9BRT3 115 aa14.65□□□□□ -0.06
COL16A1-215ENST00000488897 SERTAD4Q9NUC0 356 aa14.65□□□□□ -0.06
COL16A1-215ENST00000488897 TNFRSF13BO14836 293 aaPredicted RBP14.64□□□□□ -0.07
COL16A1-215ENST00000488897 LMO4P61968 165 aa14.64□□□□□ -0.07
COL16A1-215ENST00000488897 OR4C13Q8NGP0 309 aa14.64□□□□□ -0.07
COL16A1-215ENST00000488897 ZNF586Q9NXT0 402 aa14.64□□□□□ -0.07
COL16A1-215ENST00000488897 MXRA5Q9NR99 2828 aa14.64□□□□□ -0.07
COL16A1-215ENST00000488897 COX7A2P2O60397 106 aa14.64□□□□□ -0.07
COL16A1-215ENST00000488897 TCL1AP56279 114 aa14.64□□□□□ -0.07
COL16A1-215ENST00000488897 FAM71F2Q6NXP2 309 aa14.64□□□□□ -0.07
COL16A1-215ENST00000488897 VN1R17PQ8TDU5 208 aa14.64□□□□□ -0.07
COL16A1-215ENST00000488897 H1FXQ92522 213 aaKnown RBP14.64□□□□□ -0.07
COL16A1-215ENST00000488897 VAMP8Q9BV40 100 aa14.64□□□□□ -0.07
COL16A1-215ENST00000488897 TRAV5A0A0B4J249 113 aa14.63□□□□□ -0.07
COL16A1-215ENST00000488897 IZUMO1RA6ND01 250 aa14.63□□□□□ -0.07
COL16A1-215ENST00000488897 ZNF841Q6ZN19 808 aa14.63□□□□□ -0.07
COL16A1-215ENST00000488897 PDPNQ86YL7 162 aa14.63□□□□□ -0.07
COL16A1-215ENST00000488897 ZNF430Q9H8G1 570 aaPredicted RBP14.63□□□□□ -0.07
COL16A1-215ENST00000488897 A0A096LNT2 108 aa14.63□□□□□ -0.07
COL16A1-215ENST00000488897 BPIFB3P59826 476 aa14.63□□□□□ -0.07
COL16A1-215ENST00000488897 C10orf113Q5VZT2 155 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms