RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 PARLQ9H300 379 aa15.19■□□□□ 0.02
CCM2-216ENST00000488727 ZNF430Q9H8G1 570 aaPredicted RBP15.19■□□□□ 0.02
CCM2-216ENST00000488727 NDUFA4L2Q9NRX3 87 aa15.19■□□□□ 0.02
CCM2-216ENST00000488727 RNF114Q9Y508 228 aa15.19■□□□□ 0.02
CCM2-216ENST00000488727 TENM1Q9UKZ4 2725 aa15.19■□□□□ 0.02
CCM2-216ENST00000488727 C5orf52A6NGY3 159 aa15.18■□□□□ 0.02
CCM2-216ENST00000488727 RNASE2P10153 161 aaKnown RBP15.18■□□□□ 0.02
CCM2-216ENST00000488727 DEFA4P12838 97 aa15.18■□□□□ 0.02
CCM2-216ENST00000488727 PROK1P58294 105 aa15.18■□□□□ 0.02
CCM2-216ENST00000488727 RPL8P62917 257 aaKnown RBP15.18■□□□□ 0.02
CCM2-216ENST00000488727 PRSS8Q16651 343 aa15.18■□□□□ 0.02
CCM2-216ENST00000488727 NOL4LQ96MY1 436 aaPredicted RBP15.18■□□□□ 0.02
CCM2-216ENST00000488727 LINC00527Q9UJ94 153 aa15.18■□□□□ 0.02
CCM2-216ENST00000488727 PDE6DO43924 150 aa15.17■□□□□ 0.02
CCM2-216ENST00000488727 CXorf1O96002 111 aa15.17■□□□□ 0.02
CCM2-216ENST00000488727 COMPP49747 757 aaPredicted RBP15.17■□□□□ 0.02
CCM2-216ENST00000488727 PRR20EP86478 221 aa15.17■□□□□ 0.02
CCM2-216ENST00000488727 PRR20CP86479 221 aa15.17■□□□□ 0.02
CCM2-216ENST00000488727 PRR20DP86480 221 aa15.17■□□□□ 0.02
CCM2-216ENST00000488727 PRR20BP86481 221 aa15.17■□□□□ 0.02
CCM2-216ENST00000488727 PRR20AP86496 221 aa15.17■□□□□ 0.02
CCM2-216ENST00000488727 ZNF562Q6V9R5 426 aa15.17■□□□□ 0.02
CCM2-216ENST00000488727 TMEM144Q7Z5S9 345 aa15.17■□□□□ 0.02
CCM2-216ENST00000488727 IQCF2Q8IXL9 164 aa15.17■□□□□ 0.02
CCM2-216ENST00000488727 STPG3Q8N7X2 389 aa15.17■□□□□ 0.02
CCM2-216ENST00000488727 A0A1B0GUS0 222 aa15.17■□□□□ 0.02
CCM2-216ENST00000488727 A0A1W2PN81 502 aa15.17■□□□□ 0.02
CCM2-216ENST00000488727 C11orf94C9JXX5 98 aa15.17■□□□□ 0.02
CCM2-216ENST00000488727 ATP6V0E1O15342 81 aa15.17■□□□□ 0.02
CCM2-216ENST00000488727 CXCL1P09341 107 aa15.17■□□□□ 0.02
CCM2-216ENST00000488727 CHRNA7P36544 502 aa15.17■□□□□ 0.02
CCM2-216ENST00000488727 GNB1P62873 340 aa15.17■□□□□ 0.02
CCM2-216ENST00000488727 ZNF343Q6P1L6 599 aa15.17■□□□□ 0.02
CCM2-216ENST00000488727 COMMD5Q9GZQ3 224 aa15.17■□□□□ 0.02
CCM2-216ENST00000488727 WNT10AQ9GZT5 417 aa15.17■□□□□ 0.02
CCM2-216ENST00000488727 F6UZH7 168 aa15.16■□□□□ 0.02
CCM2-216ENST00000488727 UBE2CO00762 179 aa15.16■□□□□ 0.02
CCM2-216ENST00000488727 EGR2P11161 476 aaPredicted RBP15.16■□□□□ 0.02
CCM2-216ENST00000488727 RHOBP62745 196 aa15.16■□□□□ 0.02
CCM2-216ENST00000488727 RPL23P62829 140 aaKnown RBP15.16■□□□□ 0.02
CCM2-216ENST00000488727 RPUSD4Q96CM3 377 aaKnown RBP15.16■□□□□ 0.02
CCM2-216ENST00000488727 FAM103A1Q9BTL3 118 aaKnown RBP15.16■□□□□ 0.02
CCM2-216ENST00000488727 HAX1O00165 279 aa15.15■□□□□ 0.02
CCM2-216ENST00000488727 AP4M1O00189 453 aa15.15■□□□□ 0.02
CCM2-216ENST00000488727 OPN1MWP04001 364 aa15.15■□□□□ 0.02
CCM2-216ENST00000488727 IGF1P05019 195 aa15.15■□□□□ 0.02
CCM2-216ENST00000488727 S100A6P06703 90 aa15.15■□□□□ 0.02
CCM2-216ENST00000488727 OPN1MW2P0DN77 364 aa15.15■□□□□ 0.02
CCM2-216ENST00000488727 OPN1MW3P0DN78 364 aa15.15■□□□□ 0.02
CCM2-216ENST00000488727 FXYD3Q14802 87 aa15.15■□□□□ 0.02
CCM2-216ENST00000488727 TNXAQ16473 311 aa15.15■□□□□ 0.02
CCM2-216ENST00000488727 C10orf55Q5SWW7 151 aa15.15■□□□□ 0.02
CCM2-216ENST00000488727 MMD2Q8IY49 270 aa15.15■□□□□ 0.02
CCM2-216ENST00000488727 KLHDC1Q8N7A1 406 aa15.15■□□□□ 0.02
CCM2-216ENST00000488727 SLC35E1Q96K37 410 aa15.15■□□□□ 0.02
CCM2-216ENST00000488727 SLC45A2Q9UMX9 530 aa15.15■□□□□ 0.02
CCM2-216ENST00000488727 TGOLN2O43493 480 aa15.14■□□□□ 0.01
CCM2-216ENST00000488727 LINC00869P0C866 280 aa15.14■□□□□ 0.01
CCM2-216ENST00000488727 ARL14EPLP0DKL9 152 aa15.14■□□□□ 0.01
CCM2-216ENST00000488727 RPS10P46783 165 aaKnown RBP15.14■□□□□ 0.01
CCM2-216ENST00000488727 SNRPEP62304 92 aaKnown RBP15.14■□□□□ 0.01
CCM2-216ENST00000488727 ERHP84090 104 aaKnown RBP15.14■□□□□ 0.01
CCM2-216ENST00000488727 CD69Q07108 199 aa15.14■□□□□ 0.01
CCM2-216ENST00000488727 ZNF674Q2M3X9 581 aa15.14■□□□□ 0.01
CCM2-216ENST00000488727 C10orf99Q6UWK7 81 aa15.14■□□□□ 0.01
CCM2-216ENST00000488727 WIPF2Q8TF74 440 aaPredicted RBP15.14■□□□□ 0.01
CCM2-216ENST00000488727 ARPC1AQ92747 370 aa15.14■□□□□ 0.01
CCM2-216ENST00000488727 CNIH1O95406 144 aa15.14■□□□□ 0.01
CCM2-216ENST00000488727 GPX4P36969 197 aaPredicted RBP15.14■□□□□ 0.01
CCM2-216ENST00000488727 KRTAP10-3P60369 221 aa15.14■□□□□ 0.01
CCM2-216ENST00000488727 ADIRFQ15847 76 aa15.14■□□□□ 0.01
CCM2-216ENST00000488727 ABHD5Q8WTS1 349 aa15.14■□□□□ 0.01
CCM2-216ENST00000488727 WFDC12Q8WWY7 111 aa15.14■□□□□ 0.01
CCM2-216ENST00000488727 CACNG8Q8WXS5 425 aa15.14■□□□□ 0.01
CCM2-216ENST00000488727 TRBV24-1A0A075B6N3 115 aa15.13■□□□□ 0.01
CCM2-216ENST00000488727 TGIF2-C20orf24A0A0A6YYL0 155 aa15.13■□□□□ 0.01
CCM2-216ENST00000488727 G3V318 75 aa15.13■□□□□ 0.01
CCM2-216ENST00000488727 NPPCP23582 126 aa15.13■□□□□ 0.01
CCM2-216ENST00000488727 RPL35P42766 123 aaKnown RBP15.13■□□□□ 0.01
CCM2-216ENST00000488727 AKR1D1P51857 326 aa15.13■□□□□ 0.01
CCM2-216ENST00000488727 ZNF580Q9UK33 172 aa15.13■□□□□ 0.01
CCM2-216ENST00000488727 STAB1Q9NY15 2570 aa15.13■□□□□ 0.01
CCM2-216ENST00000488727 CGB1A6NKQ9 187 aa15.12■□□□□ 0.01
CCM2-216ENST00000488727 E7EUB6 86 aa15.12■□□□□ 0.01
CCM2-216ENST00000488727 ATP5G3P48201 142 aa15.12■□□□□ 0.01
CCM2-216ENST00000488727 CRIP2P52943 208 aaPredicted RBP15.12■□□□□ 0.01
CCM2-216ENST00000488727 OR10W1Q8NGF6 305 aa15.12■□□□□ 0.01
CCM2-216ENST00000488727 SGMS2Q8NHU3 365 aa15.12■□□□□ 0.01
CCM2-216ENST00000488727 SRSF12Q8WXF0 261 aaKnown RBP15.12■□□□□ 0.01
CCM2-216ENST00000488727 DOK5Q9P104 306 aa15.12■□□□□ 0.01
CCM2-216ENST00000488727 URGCP-MRPS24S4R325 110 aa15.12■□□□□ 0.01
CCM2-216ENST00000488727 ARL2-SNX15V9GYD0 113 aa15.12■□□□□ 0.01
CCM2-216ENST00000488727 ACTL6BO94805 426 aa15.12■□□□□ 0.01
CCM2-216ENST00000488727 GCHFRP30047 84 aa15.12■□□□□ 0.01
CCM2-216ENST00000488727 GAMTQ14353 236 aa15.12■□□□□ 0.01
CCM2-216ENST00000488727 C19orf54Q5BKX5 351 aa15.12■□□□□ 0.01
CCM2-216ENST00000488727 ZNF329Q86UD4 541 aa15.12■□□□□ 0.01
CCM2-216ENST00000488727 RNASEH2CQ8TDP1 164 aaKnown RBP15.12■□□□□ 0.01
CCM2-216ENST00000488727 CLN5O75503 358 aa15.11■□□□□ 0.01
CCM2-216ENST00000488727 MT-CO2P00403 227 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms