RNA–Protein interactions for RNA: ENST00000488175.5

GCOM1-210, Transcript of GRINL1A complex locus 1, humanhuman

TSL 1 (best)

Gene GCOM1, Length 2,601 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-210ENST00000488175 GAL3ST2Q9H3Q3 398 aa13.17□□□□□ -0.3
GCOM1-210ENST00000488175 EP300Q09472 2414 aaPredicted RBP13.17□□□□□ -0.3
GCOM1-210ENST00000488175 IGHV3-72A0A0B4J1Y9 119 aa13.16□□□□□ -0.3
GCOM1-210ENST00000488175 A0A1B0GXF2 115 aa13.16□□□□□ -0.3
GCOM1-210ENST00000488175 ZNF137PP52743 207 aa13.16□□□□□ -0.3
GCOM1-210ENST00000488175 DEFB123Q8N688 67 aa13.16□□□□□ -0.3
GCOM1-210ENST00000488175 OR4F17Q8NGA8 305 aa13.16□□□□□ -0.3
GCOM1-210ENST00000488175 GTSF1Q8WW33 167 aa13.16□□□□□ -0.3
GCOM1-210ENST00000488175 PGLYRP4Q96LB8 373 aa13.16□□□□□ -0.3
GCOM1-210ENST00000488175 SSUH2Q9Y2M2 353 aa13.16□□□□□ -0.3
GCOM1-210ENST00000488175 TANC2Q9HCD6 1990 aa13.16□□□□□ -0.3
GCOM1-210ENST00000488175 A0A1W2PPI3 338 aa13.16□□□□□ -0.3
GCOM1-210ENST00000488175 TEX36Q5VZQ5 186 aa13.16□□□□□ -0.3
GCOM1-210ENST00000488175 ORAOV1Q8WV07 137 aa13.16□□□□□ -0.3
GCOM1-210ENST00000488175 ABCA1O95477 2261 aa13.15□□□□□ -0.3
GCOM1-210ENST00000488175 SUB1P53999 127 aaKnown RBP eCLIP13.15□□□□□ -0.3
GCOM1-210ENST00000488175 ZNF596Q8TC21 504 aa13.15□□□□□ -0.3
GCOM1-210ENST00000488175 GPR82Q96P67 336 aa13.15□□□□□ -0.3
GCOM1-210ENST00000488175 CHRDL1Q9BU40 450 aa13.15□□□□□ -0.3
GCOM1-210ENST00000488175 ADGRG4Q8IZF6 3080 aa13.15□□□□□ -0.3
GCOM1-210ENST00000488175 IGLV2-23P01705 113 aa13.15□□□□□ -0.3
GCOM1-210ENST00000488175 NBEAP1P0C6P0 100 aa13.15□□□□□ -0.3
GCOM1-210ENST00000488175 PRB4P10163 310 aaPredicted RBP13.15□□□□□ -0.3
GCOM1-210ENST00000488175 CD40P25942 277 aa13.15□□□□□ -0.3
GCOM1-210ENST00000488175 HBBP68871 147 aa13.15□□□□□ -0.3
GCOM1-210ENST00000488175 ERASQ7Z444 233 aa13.15□□□□□ -0.3
GCOM1-210ENST00000488175 THAP8Q8NA92 274 aa13.15□□□□□ -0.3
GCOM1-210ENST00000488175 TMEM70Q9BUB7 260 aa13.15□□□□□ -0.3
GCOM1-210ENST00000488175 FAM87AP0C7U9 286 aa13.14□□□□□ -0.31
GCOM1-210ENST00000488175 PCP4P48539 62 aa13.14□□□□□ -0.31
GCOM1-210ENST00000488175 GSX1Q9H4S2 264 aaPredicted RBP13.14□□□□□ -0.31
GCOM1-210ENST00000488175 RPP21Q9H633 154 aaKnown RBP13.14□□□□□ -0.31
GCOM1-210ENST00000488175 NKX6-3A6NJ46 265 aa13.14□□□□□ -0.31
GCOM1-210ENST00000488175 ENSAO43768 121 aaKnown RBP13.14□□□□□ -0.31
GCOM1-210ENST00000488175 TOX4O94842 621 aa13.14□□□□□ -0.31
GCOM1-210ENST00000488175 ZNF138P52744 262 aa13.14□□□□□ -0.31
GCOM1-210ENST00000488175 TMEM30BQ3MIR4 351 aa13.14□□□□□ -0.31
GCOM1-210ENST00000488175 FAM120AOSQ5T036 256 aa13.14□□□□□ -0.31
GCOM1-210ENST00000488175 VSTM2AQ8TAG5 236 aa13.14□□□□□ -0.31
GCOM1-210ENST00000488175 LOXL4Q96JB6 756 aa13.14□□□□□ -0.31
GCOM1-210ENST00000488175 MCRIP2Q9BUT9 160 aaKnown RBP13.14□□□□□ -0.31
GCOM1-210ENST00000488175 COX11Q9Y6N1 276 aa13.14□□□□□ -0.31
GCOM1-210ENST00000488175 SPAARA0A1B0GVQ0 90 aa13.13□□□□□ -0.31
GCOM1-210ENST00000488175 OR4C46A6NHA9 309 aa13.13□□□□□ -0.31
GCOM1-210ENST00000488175 INS-IGF2F8WCM5 200 aa13.13□□□□□ -0.31
GCOM1-210ENST00000488175 M0R296 226 aa13.13□□□□□ -0.31
GCOM1-210ENST00000488175 Q71RC1 249 aaPredicted RBP13.13□□□□□ -0.31
GCOM1-210ENST00000488175 ATP5L2Q7Z4Y8 100 aa13.13□□□□□ -0.31
GCOM1-210ENST00000488175 RNASE8Q8TDE3 154 aaKnown RBP13.13□□□□□ -0.31
GCOM1-210ENST00000488175 PERPQ96FX8 193 aa13.13□□□□□ -0.31
GCOM1-210ENST00000488175 MLST8Q9BVC4 326 aa13.13□□□□□ -0.31
GCOM1-210ENST00000488175 ZNF835Q9Y2P0 537 aa13.13□□□□□ -0.31
GCOM1-210ENST00000488175 DYSFO75923 2080 aa13.13□□□□□ -0.31
GCOM1-210ENST00000488175 TRAV8-1A0A0A6YYK1 113 aa13.13□□□□□ -0.31
GCOM1-210ENST00000488175 hDV102S1A0JD36 115 aa13.13□□□□□ -0.31
GCOM1-210ENST00000488175 KALRNO60229 2985 aa13.13□□□□□ -0.31
GCOM1-210ENST00000488175 P01737 135 aa13.13□□□□□ -0.31
GCOM1-210ENST00000488175 PRB3Q04118 309 aaPredicted RBP13.13□□□□□ -0.31
GCOM1-210ENST00000488175 LYPD2Q6UXB3 125 aa13.13□□□□□ -0.31
GCOM1-210ENST00000488175 IGHV1-24A0A0C4DH33 117 aa13.12□□□□□ -0.31
GCOM1-210ENST00000488175 IGLC7A0M8Q6 106 aa13.12□□□□□ -0.31
GCOM1-210ENST00000488175 CA7P43166 264 aa13.12□□□□□ -0.31
GCOM1-210ENST00000488175 ZNF738Q8NE65 137 aa13.12□□□□□ -0.31
GCOM1-210ENST00000488175 CCL17Q92583 94 aa13.12□□□□□ -0.31
GCOM1-210ENST00000488175 ASCL3Q9NQ33 180 aa13.12□□□□□ -0.31
GCOM1-210ENST00000488175 KLF12Q9Y4X4 402 aa13.12□□□□□ -0.31
GCOM1-210ENST00000488175 CNOT1A5YKK6 2376 aaKnown RBP13.12□□□□□ -0.31
GCOM1-210ENST00000488175 DLX1P56177 255 aa13.12□□□□□ -0.31
GCOM1-210ENST00000488175 MUC15Q8N387 334 aa13.12□□□□□ -0.31
GCOM1-210ENST00000488175 WASHC3Q9Y3C0 194 aa13.12□□□□□ -0.31
GCOM1-210ENST00000488175 TIMM8BQ9Y5J9 83 aaPredicted RBP13.12□□□□□ -0.31
GCOM1-210ENST00000488175 H0Y8G0 127 aa13.11□□□□□ -0.31
GCOM1-210ENST00000488175 UBE2V1Q13404 147 aa13.11□□□□□ -0.31
GCOM1-210ENST00000488175 DEFB124Q8NES8 71 aa13.11□□□□□ -0.31
GCOM1-210ENST00000488175 PRSS22Q9GZN4 317 aa13.11□□□□□ -0.31
GCOM1-210ENST00000488175 DMXL1Q9Y485 3027 aa13.11□□□□□ -0.31
GCOM1-210ENST00000488175 PKDREJQ9NTG1 2253 aa13.11□□□□□ -0.31
GCOM1-210ENST00000488175 A8MWL6 223 aa13.11□□□□□ -0.31
GCOM1-210ENST00000488175 MEF2CQ06413 473 aaPredicted RBP13.11□□□□□ -0.31
GCOM1-210ENST00000488175 MRGPRG-AS1Q2M3A8 158 aa13.11□□□□□ -0.31
GCOM1-210ENST00000488175 ZADH2Q8N4Q0 377 aa13.11□□□□□ -0.31
GCOM1-210ENST00000488175 STXBP6Q8NFX7 210 aa13.11□□□□□ -0.31
GCOM1-210ENST00000488175 OR4A5Q8NH83 315 aa13.11□□□□□ -0.31
GCOM1-210ENST00000488175 Q9H3A6 140 aa13.11□□□□□ -0.31
GCOM1-210ENST00000488175 MPV17L2Q567V2 206 aa13.1□□□□□ -0.31
GCOM1-210ENST00000488175 DAZAP1Q96EP5 407 aaKnown RBP13.1□□□□□ -0.31
GCOM1-210ENST00000488175 IGHV1-69-2A0A0G2JMI3 117 aa13.1□□□□□ -0.31
GCOM1-210ENST00000488175 SYS1-DBNDD2H3BUS1 97 aa13.1□□□□□ -0.31
GCOM1-210ENST00000488175 LEPROTL1O95214 131 aa13.1□□□□□ -0.31
GCOM1-210ENST00000488175 TOMM40O96008 361 aa13.1□□□□□ -0.31
GCOM1-210ENST00000488175 TCRAP04437 139 aa13.1□□□□□ -0.31
GCOM1-210ENST00000488175 TNFRSF1AP19438 455 aa13.1□□□□□ -0.31
GCOM1-210ENST00000488175 CNTFRP26992 372 aa13.1□□□□□ -0.31
GCOM1-210ENST00000488175 CIARTQ8N365 385 aaPredicted RBP13.1□□□□□ -0.31
GCOM1-210ENST00000488175 TMEM186Q96B77 213 aa13.1□□□□□ -0.31
GCOM1-210ENST00000488175 ASCL2Q99929 193 aa13.1□□□□□ -0.31
GCOM1-210ENST00000488175 C19orf71A6NCJ1 209 aa13.09□□□□□ -0.31
GCOM1-210ENST00000488175 LTAP01374 205 aa13.09□□□□□ -0.31
GCOM1-210ENST00000488175 GP9P14770 177 aa13.09□□□□□ -0.31
GCOM1-210ENST00000488175 VMA21Q3ZAQ7 101 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms