RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 MPC1Q9Y5U8 109 aa3.83□□□□□ -1.8
CDC42BPA-213ENST00000488131 SELENOKQ9Y6D0 94 aa3.83□□□□□ -1.8
CDC42BPA-213ENST00000488131 RP1P56715 2156 aa3.83□□□□□ -1.8
CDC42BPA-213ENST00000488131 TCRBV4S1A1TA0A5B7 111 aa3.82□□□□□ -1.8
CDC42BPA-213ENST00000488131 MANSC4A6NHS7 340 aaPredicted RBP3.82□□□□□ -1.8
CDC42BPA-213ENST00000488131 SRRM4A7MD48 611 aaKnown RBP3.82□□□□□ -1.8
CDC42BPA-213ENST00000488131 C17orf98A8MV24 154 aa3.82□□□□□ -1.8
CDC42BPA-213ENST00000488131 A8MWL6 223 aa3.82□□□□□ -1.8
CDC42BPA-213ENST00000488131 HSPB6O14558 160 aa3.82□□□□□ -1.8
CDC42BPA-213ENST00000488131 SNAI2O43623 268 aa3.82□□□□□ -1.8
CDC42BPA-213ENST00000488131 SS18L1O75177 396 aaPredicted RBP3.82□□□□□ -1.8
CDC42BPA-213ENST00000488131 NCR2O95944 276 aa3.82□□□□□ -1.8
CDC42BPA-213ENST00000488131 CAMPP49913 170 aa3.82□□□□□ -1.8
CDC42BPA-213ENST00000488131 FXYD2P54710 66 aa3.82□□□□□ -1.8
CDC42BPA-213ENST00000488131 FOXA3P55318 350 aaPredicted RBP3.82□□□□□ -1.8
CDC42BPA-213ENST00000488131 ATP5G2Q06055 141 aa3.82□□□□□ -1.8
CDC42BPA-213ENST00000488131 ZNF816Q0VGE8 651 aaPredicted RBP3.82□□□□□ -1.8
CDC42BPA-213ENST00000488131 ZNF146Q15072 292 aa3.82□□□□□ -1.8
CDC42BPA-213ENST00000488131 ACP7Q6ZNF0 438 aa3.82□□□□□ -1.8
CDC42BPA-213ENST00000488131 RPRMLQ8N4K4 120 aa3.82□□□□□ -1.8
CDC42BPA-213ENST00000488131 SSMEM1Q8WWF3 244 aa3.82□□□□□ -1.8
CDC42BPA-213ENST00000488131 ARPC1AQ92747 370 aa3.82□□□□□ -1.8
CDC42BPA-213ENST00000488131 MRPL32Q9BYC8 188 aaKnown RBP3.82□□□□□ -1.8
CDC42BPA-213ENST00000488131 PKIBQ9C010 78 aa3.82□□□□□ -1.8
CDC42BPA-213ENST00000488131 OR2H1Q9GZK4 316 aa3.82□□□□□ -1.8
CDC42BPA-213ENST00000488131 PRSS22Q9GZN4 317 aa3.82□□□□□ -1.8
CDC42BPA-213ENST00000488131 VCX2Q9H322 139 aa3.82□□□□□ -1.8
CDC42BPA-213ENST00000488131 ZNF492Q9P255 531 aa3.82□□□□□ -1.8
CDC42BPA-213ENST00000488131 PTPRBP23467 1997 aa3.82□□□□□ -1.8
CDC42BPA-213ENST00000488131 A0A096LNJ9 63 aa3.81□□□□□ -1.8
CDC42BPA-213ENST00000488131 A0A1B0GWB2 263 aa3.81□□□□□ -1.8
CDC42BPA-213ENST00000488131 IGLL5B9A064 214 aa3.81□□□□□ -1.8
CDC42BPA-213ENST00000488131 H3BMG7 143 aa3.81□□□□□ -1.8
CDC42BPA-213ENST00000488131 NKX2-8O15522 239 aa3.81□□□□□ -1.8
CDC42BPA-213ENST00000488131 TRIAP1O43715 76 aa3.81□□□□□ -1.8
CDC42BPA-213ENST00000488131 CER1O95813 267 aa3.81□□□□□ -1.8
CDC42BPA-213ENST00000488131 APOHP02749 345 aaPredicted RBP3.81□□□□□ -1.8
CDC42BPA-213ENST00000488131 MT-ATP8P03928 68 aa3.81□□□□□ -1.8
CDC42BPA-213ENST00000488131 ZNF32P17041 273 aa3.81□□□□□ -1.8
CDC42BPA-213ENST00000488131 XGP55808 180 aa3.81□□□□□ -1.8
CDC42BPA-213ENST00000488131 PCBD1P61457 104 aa3.81□□□□□ -1.8
CDC42BPA-213ENST00000488131 ERVK11-1P61568 191 aa3.81□□□□□ -1.8
CDC42BPA-213ENST00000488131 FOXI1Q12951 378 aa3.81□□□□□ -1.8
CDC42BPA-213ENST00000488131 TAL2Q16559 108 aa3.81□□□□□ -1.8
CDC42BPA-213ENST00000488131 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.81□□□□□ -1.8
CDC42BPA-213ENST00000488131 SH2D6Q7Z4S9 175 aa3.81□□□□□ -1.8
CDC42BPA-213ENST00000488131 PIP4P1Q86T03 277 aa3.81□□□□□ -1.8
CDC42BPA-213ENST00000488131 RTTNQ86VV8 2226 aa3.81□□□□□ -1.8
CDC42BPA-213ENST00000488131 ABHD12Q8N2K0 398 aa3.81□□□□□ -1.8
CDC42BPA-213ENST00000488131 C11orf44Q8N8P7 122 aa3.81□□□□□ -1.8
CDC42BPA-213ENST00000488131 OR10X1Q8NGY0 326 aa3.81□□□□□ -1.8
CDC42BPA-213ENST00000488131 DDB2Q92466 427 aa3.81□□□□□ -1.8
CDC42BPA-213ENST00000488131 RITA1Q96K30 269 aa3.81□□□□□ -1.8
CDC42BPA-213ENST00000488131 HARBI1Q96MB7 349 aa3.81□□□□□ -1.8
CDC42BPA-213ENST00000488131 HSD17B10Q99714 261 aaKnown RBP3.81□□□□□ -1.8
CDC42BPA-213ENST00000488131 C20orf78Q9BR46 151 aa3.81□□□□□ -1.8
CDC42BPA-213ENST00000488131 ANAPC13Q9BS18 74 aa3.81□□□□□ -1.8
CDC42BPA-213ENST00000488131 RPP21Q9H633 154 aaKnown RBP3.81□□□□□ -1.8
CDC42BPA-213ENST00000488131 HIF1ANQ9NWT6 349 aa3.81□□□□□ -1.8
CDC42BPA-213ENST00000488131 KLRF1Q9NZS2 232 aa3.81□□□□□ -1.8
CDC42BPA-213ENST00000488131 KLF12Q9Y4X4 402 aa3.81□□□□□ -1.8
CDC42BPA-213ENST00000488131 USF3Q68DE3 2245 aa3.81□□□□□ -1.8
CDC42BPA-213ENST00000488131 UTRNP46939 3433 aa3.81□□□□□ -1.8
CDC42BPA-213ENST00000488131 C19orf71A6NCJ1 209 aa3.81□□□□□ -1.8
CDC42BPA-213ENST00000488131 LILRA5A6NI73 299 aa3.81□□□□□ -1.8
CDC42BPA-213ENST00000488131 C10orf142B7Z368 130 aa3.81□□□□□ -1.8
CDC42BPA-213ENST00000488131 PEX7O00628 323 aa3.81□□□□□ -1.8
CDC42BPA-213ENST00000488131 ACTL6BO94805 426 aa3.81□□□□□ -1.8
CDC42BPA-213ENST00000488131 APOMO95445 188 aa3.81□□□□□ -1.8
CDC42BPA-213ENST00000488131 CLEC3BP05452 202 aa3.81□□□□□ -1.8
CDC42BPA-213ENST00000488131 SP1P08047 785 aa3.81□□□□□ -1.8
CDC42BPA-213ENST00000488131 NHLRC4P0CG21 123 aaPredicted RBP3.81□□□□□ -1.8
CDC42BPA-213ENST00000488131 SRD5A1P18405 259 aa3.81□□□□□ -1.8
CDC42BPA-213ENST00000488131 INSL3P51460 131 aa3.81□□□□□ -1.8
CDC42BPA-213ENST00000488131 SRYQ05066 204 aa3.81□□□□□ -1.8
CDC42BPA-213ENST00000488131 SPINK9Q5DT21 86 aa3.81□□□□□ -1.8
CDC42BPA-213ENST00000488131 Q6AWC8 147 aa3.81□□□□□ -1.8
CDC42BPA-213ENST00000488131 RBPMS2Q6ZRY4 209 aaKnown RBP3.81□□□□□ -1.8
CDC42BPA-213ENST00000488131 C1orf210Q8IVY1 113 aa3.81□□□□□ -1.8
CDC42BPA-213ENST00000488131 NFAM1Q8NET5 270 aaPredicted RBP3.81□□□□□ -1.8
CDC42BPA-213ENST00000488131 FGFBP3Q8TAT2 258 aa3.81□□□□□ -1.8
CDC42BPA-213ENST00000488131 OSR1Q8TAX0 266 aaPredicted RBP3.81□□□□□ -1.8
CDC42BPA-213ENST00000488131 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.81□□□□□ -1.8
CDC42BPA-213ENST00000488131 COQ2Q96H96 371 aa3.81□□□□□ -1.8
CDC42BPA-213ENST00000488131 CITED1Q99966 193 aa3.81□□□□□ -1.8
CDC42BPA-213ENST00000488131 NABP2Q9BQ15 211 aa3.81□□□□□ -1.8
CDC42BPA-213ENST00000488131 MCRIP2Q9BUT9 160 aaKnown RBP3.81□□□□□ -1.8
CDC42BPA-213ENST00000488131 CHAC1Q9BUX1 264 aa3.81□□□□□ -1.8
CDC42BPA-213ENST00000488131 MLST8Q9BVC4 326 aa3.81□□□□□ -1.8
CDC42BPA-213ENST00000488131 PLEKHA3Q9HB20 300 aa3.81□□□□□ -1.8
CDC42BPA-213ENST00000488131 PDE4DIPQ5VU43 2346 aa3.81□□□□□ -1.8
CDC42BPA-213ENST00000488131 ZNF407Q9C0G0 2248 aa3.81□□□□□ -1.8
CDC42BPA-213ENST00000488131 PCSK5Q92824 1860 aa3.81□□□□□ -1.8
CDC42BPA-213ENST00000488131 TRGV11A0A075B6L2 103 aa3.8□□□□□ -1.8
CDC42BPA-213ENST00000488131 CENPVL3A0A0U1RRI6 287 aa3.8□□□□□ -1.8
CDC42BPA-213ENST00000488131 LINC01619G3V211 115 aa3.8□□□□□ -1.8
CDC42BPA-213ENST00000488131 C8orf88P0DMB2 117 aa3.8□□□□□ -1.8
CDC42BPA-213ENST00000488131 CA6P23280 308 aa3.8□□□□□ -1.8
CDC42BPA-213ENST00000488131 MYCNOSP40205 109 aa3.8□□□□□ -1.8
CDC42BPA-213ENST00000488131 TIRAPP58753 221 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms