RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 WFDC10AQ9H1F0 79 aa12.89□□□□□ -0.35
SHROOM1-205ENST00000488072 MPC2O95563 127 aa12.88□□□□□ -0.35
SHROOM1-205ENST00000488072 CD7P09564 240 aa12.88□□□□□ -0.35
SHROOM1-205ENST00000488072 DLK1P80370 383 aa12.88□□□□□ -0.35
SHROOM1-205ENST00000488072 SLC38A11Q08AI6 406 aa12.88□□□□□ -0.35
SHROOM1-205ENST00000488072 DEFB121Q5J5C9 76 aa12.88□□□□□ -0.35
SHROOM1-205ENST00000488072 Q8N1Y9 231 aa12.88□□□□□ -0.35
SHROOM1-205ENST00000488072 OR10P1Q8NGE3 313 aa12.88□□□□□ -0.35
SHROOM1-205ENST00000488072 Q8WTZ3 238 aa12.88□□□□□ -0.35
SHROOM1-205ENST00000488072 LYRM2Q9NU23 88 aaPredicted RBP12.88□□□□□ -0.35
SHROOM1-205ENST00000488072 CHAC2Q8WUX2 184 aa12.87□□□□□ -0.35
SHROOM1-205ENST00000488072 TRGV9Q99603 122 aa12.87□□□□□ -0.35
SHROOM1-205ENST00000488072 PBDC1Q9BVG4 233 aa12.87□□□□□ -0.35
SHROOM1-205ENST00000488072 MBD2Q9UBB5 411 aa12.87□□□□□ -0.35
SHROOM1-205ENST00000488072 LSM4Q9Y4Z0 139 aaKnown RBP12.87□□□□□ -0.35
SHROOM1-205ENST00000488072 DNAH9Q9NYC9 4486 aa12.86□□□□□ -0.35
SHROOM1-205ENST00000488072 DFFBO76075 338 aa12.86□□□□□ -0.35
SHROOM1-205ENST00000488072 PVALBP20472 110 aaPredicted RBP12.86□□□□□ -0.35
SHROOM1-205ENST00000488072 TFPI2P48307 235 aa12.86□□□□□ -0.35
SHROOM1-205ENST00000488072 LYZP61626 148 aa12.86□□□□□ -0.35
SHROOM1-205ENST00000488072 GBGT1Q8N5D6 347 aa12.86□□□□□ -0.35
SHROOM1-205ENST00000488072 MARC2Q969Z3 335 aa12.86□□□□□ -0.35
SHROOM1-205ENST00000488072 TECRQ9NZ01 308 aaKnown RBP12.86□□□□□ -0.35
SHROOM1-205ENST00000488072 CRYBB3P26998 211 aa12.85□□□□□ -0.35
SHROOM1-205ENST00000488072 SULT1A1P50225 295 aa12.85□□□□□ -0.35
SHROOM1-205ENST00000488072 EWSR1Q01844 656 aaKnown RBP eCLIP12.85□□□□□ -0.35
SHROOM1-205ENST00000488072 FAM90A2PQ658T7 463 aa12.85□□□□□ -0.35
SHROOM1-205ENST00000488072 TMEM144Q7Z5S9 345 aa12.85□□□□□ -0.35
SHROOM1-205ENST00000488072 RNF125Q96EQ8 232 aa12.85□□□□□ -0.35
SHROOM1-205ENST00000488072 VSIRQ9H7M9 311 aa12.85□□□□□ -0.35
SHROOM1-205ENST00000488072 DOK5Q9P104 306 aa12.85□□□□□ -0.35
SHROOM1-205ENST00000488072 U3KQE9 123 aa12.85□□□□□ -0.35
SHROOM1-205ENST00000488072 SORL1Q92673 2214 aa12.85□□□□□ -0.35
SHROOM1-205ENST00000488072 E5RGE8 158 aa12.84□□□□□ -0.35
SHROOM1-205ENST00000488072 SMLR1H3BR10 107 aa12.84□□□□□ -0.35
SHROOM1-205ENST00000488072 NPPCP23582 126 aa12.84□□□□□ -0.35
SHROOM1-205ENST00000488072 CYCSP99999 105 aaKnown RBP12.84□□□□□ -0.35
SHROOM1-205ENST00000488072 LCN12Q6JVE5 192 aa12.84□□□□□ -0.35
SHROOM1-205ENST00000488072 CYP2G1PQ6ZSU1 146 aa12.84□□□□□ -0.35
SHROOM1-205ENST00000488072 TCF24Q7RTU0 167 aa12.84□□□□□ -0.35
SHROOM1-205ENST00000488072 WFDC3Q8IUB2 231 aa12.84□□□□□ -0.35
SHROOM1-205ENST00000488072 METTL26Q96S19 204 aa12.84□□□□□ -0.35
SHROOM1-205ENST00000488072 MGST2Q99735 147 aa12.84□□□□□ -0.35
SHROOM1-205ENST00000488072 GINS3Q9BRX5 216 aa12.84□□□□□ -0.35
SHROOM1-205ENST00000488072 UBQLN2Q9UHD9 624 aa12.84□□□□□ -0.35
SHROOM1-205ENST00000488072 RLN2P04090 185 aa12.83□□□□□ -0.36
SHROOM1-205ENST00000488072 HNRNPCP07910 306 aaKnown RBP eCLIP12.83□□□□□ -0.36
SHROOM1-205ENST00000488072 P2RY1P47900 373 aa12.83□□□□□ -0.36
SHROOM1-205ENST00000488072 RBPMS2Q6ZRY4 209 aaKnown RBP12.83□□□□□ -0.36
SHROOM1-205ENST00000488072 FAM24BQ8N5W8 94 aa12.83□□□□□ -0.36
SHROOM1-205ENST00000488072 OR2K2Q8NGT1 345 aa12.83□□□□□ -0.36
SHROOM1-205ENST00000488072 SMIM3Q9BZL3 60 aa12.83□□□□□ -0.36
SHROOM1-205ENST00000488072 NPVFQ9HCQ7 196 aa12.83□□□□□ -0.36
SHROOM1-205ENST00000488072 UBE2L5PA0A1B0GUS4 154 aa12.82□□□□□ -0.36
SHROOM1-205ENST00000488072 G3V3Q6 166 aa12.82□□□□□ -0.36
SHROOM1-205ENST00000488072 ORM2P19652 201 aa12.82□□□□□ -0.36
SHROOM1-205ENST00000488072 CD81P60033 236 aa12.82□□□□□ -0.36
SHROOM1-205ENST00000488072 CLINT1Q14677 625 aa12.82□□□□□ -0.36
SHROOM1-205ENST00000488072 ZNF124Q15973 351 aa12.82□□□□□ -0.36
SHROOM1-205ENST00000488072 DEFB125Q8N687 156 aa12.82□□□□□ -0.36
SHROOM1-205ENST00000488072 BPIFCQ8NFQ6 507 aa12.82□□□□□ -0.36
SHROOM1-205ENST00000488072 ASCL2Q99929 193 aa12.82□□□□□ -0.36
SHROOM1-205ENST00000488072 NEURL2Q9BR09 285 aa12.82□□□□□ -0.36
SHROOM1-205ENST00000488072 WFDC1Q9HC57 220 aa12.82□□□□□ -0.36
SHROOM1-205ENST00000488072 C19orf73Q9NVV2 129 aa12.82□□□□□ -0.36
SHROOM1-205ENST00000488072 SCGB2A1O75556 95 aa12.81□□□□□ -0.36
SHROOM1-205ENST00000488072 MIC13Q5XKP0 118 aa12.81□□□□□ -0.36
SHROOM1-205ENST00000488072 LEMD1Q68G75 181 aa12.81□□□□□ -0.36
SHROOM1-205ENST00000488072 PATE2Q6UY27 113 aa12.81□□□□□ -0.36
SHROOM1-205ENST00000488072 OR5C1Q8NGR4 320 aa12.81□□□□□ -0.36
SHROOM1-205ENST00000488072 OR1B1Q8NGR6 318 aa12.81□□□□□ -0.36
SHROOM1-205ENST00000488072 UQCC1Q9NVA1 299 aa12.81□□□□□ -0.36
SHROOM1-205ENST00000488072 RABAC1Q9UI14 185 aa12.81□□□□□ -0.36
SHROOM1-205ENST00000488072 SLC45A2Q9UMX9 530 aa12.81□□□□□ -0.36
SHROOM1-205ENST00000488072 RFNGQ9Y644 331 aa12.81□□□□□ -0.36
SHROOM1-205ENST00000488072 TSPAN4O14817 238 aa12.8□□□□□ -0.36
SHROOM1-205ENST00000488072 AGPAT2O15120 278 aa12.8□□□□□ -0.36
SHROOM1-205ENST00000488072 LYL1P12980 280 aa12.8□□□□□ -0.36
SHROOM1-205ENST00000488072 VWC2Q2TAL6 325 aa12.8□□□□□ -0.36
SHROOM1-205ENST00000488072 TEPPQ6URK8 271 aa12.8□□□□□ -0.36
SHROOM1-205ENST00000488072 C16orf54Q6UWD8 224 aa12.8□□□□□ -0.36
SHROOM1-205ENST00000488072 STX12Q86Y82 276 aa12.8□□□□□ -0.36
SHROOM1-205ENST00000488072 THAP6Q8TBB0 222 aa12.8□□□□□ -0.36
SHROOM1-205ENST00000488072 GLMPQ8WWB7 406 aa12.8□□□□□ -0.36
SHROOM1-205ENST00000488072 CITED4Q96RK1 184 aa12.8□□□□□ -0.36
SHROOM1-205ENST00000488072 TMEM147Q9BVK8 224 aa12.8□□□□□ -0.36
SHROOM1-205ENST00000488072 GGACTQ9BVM4 153 aa12.8□□□□□ -0.36
SHROOM1-205ENST00000488072 WDR83OSQ9Y284 106 aa12.8□□□□□ -0.36
SHROOM1-205ENST00000488072 FNDC10F2Z333 226 aa12.79□□□□□ -0.36
SHROOM1-205ENST00000488072 BUB3O43684 328 aa12.79□□□□□ -0.36
SHROOM1-205ENST00000488072 GIPP09681 153 aaPredicted RBP12.79□□□□□ -0.36
SHROOM1-205ENST00000488072 LINC00869P0C866 280 aa12.79□□□□□ -0.36
SHROOM1-205ENST00000488072 IGHV4-30-4P0DP06 118 aa12.79□□□□□ -0.36
SHROOM1-205ENST00000488072 RPL12P30050 165 aaKnown RBP12.79□□□□□ -0.36
SHROOM1-205ENST00000488072 S100A11P31949 105 aa12.79□□□□□ -0.36
SHROOM1-205ENST00000488072 EIF2B2P49770 351 aaKnown RBP12.79□□□□□ -0.36
SHROOM1-205ENST00000488072 RPL11P62913 178 aaKnown RBP12.79□□□□□ -0.36
SHROOM1-205ENST00000488072 UHRF2Q96PU4 802 aa12.79□□□□□ -0.36
SHROOM1-205ENST00000488072 MS4A6AQ9H2W1 248 aa12.79□□□□□ -0.36
SHROOM1-205ENST00000488072 ZMAT5Q9UDW3 170 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms