RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 DYNLT1P63172 113 aa0.53□□□□□ -2.32
R3HDM1-219ENST00000488035 SPRNQ5BIV9 151 aa0.53□□□□□ -2.32
R3HDM1-219ENST00000488035 TEX261Q6UWH6 196 aa0.53□□□□□ -2.32
R3HDM1-219ENST00000488035 S100A7AQ86SG5 101 aa0.53□□□□□ -2.32
R3HDM1-219ENST00000488035 SLAMF6Q96DU3 332 aa0.53□□□□□ -2.32
R3HDM1-219ENST00000488035 SIGMAR1Q99720 223 aa0.53□□□□□ -2.32
R3HDM1-219ENST00000488035 BCL2L10Q9HD36 194 aa0.53□□□□□ -2.32
R3HDM1-219ENST00000488035 CDC42SE1Q9NRR8 79 aa0.53□□□□□ -2.32
R3HDM1-219ENST00000488035 TVP23BQ9NYZ1 205 aa0.53□□□□□ -2.32
R3HDM1-219ENST00000488035 U3KQ87 197 aa0.53□□□□□ -2.32
R3HDM1-219ENST00000488035 CASP8AP2Q9UKL3 1982 aa0.53□□□□□ -2.32
R3HDM1-219ENST00000488035 HEATR1Q9H583 2144 aaKnown RBP0.53□□□□□ -2.32
R3HDM1-219ENST00000488035 MYH10P35580 1976 aa0.52□□□□□ -2.33
R3HDM1-219ENST00000488035 ZNF736B4DX44 427 aaPredicted RBP0.52□□□□□ -2.33
R3HDM1-219ENST00000488035 INE1O15225 51 aa0.52□□□□□ -2.33
R3HDM1-219ENST00000488035 CYB5BO43169 146 aa0.52□□□□□ -2.33
R3HDM1-219ENST00000488035 GADD45GO95257 159 aa0.52□□□□□ -2.33
R3HDM1-219ENST00000488035 AP3S2P59780 193 aa0.52□□□□□ -2.33
R3HDM1-219ENST00000488035 RHOBP62745 196 aa0.52□□□□□ -2.33
R3HDM1-219ENST00000488035 GDF5OSQ5U4N7 250 aa0.52□□□□□ -2.33
R3HDM1-219ENST00000488035 DGCR14Q96DF8 476 aaKnown RBP0.52□□□□□ -2.33
R3HDM1-219ENST00000488035 LINC00526Q96FQ7 95 aa0.52□□□□□ -2.33
R3HDM1-219ENST00000488035 MRPL57Q9BQC6 102 aaKnown RBP0.52□□□□□ -2.33
R3HDM1-219ENST00000488035 PRADC1Q9BSG0 188 aa0.52□□□□□ -2.33
R3HDM1-219ENST00000488035 TLNRD1Q9H1K6 362 aa0.52□□□□□ -2.33
R3HDM1-219ENST00000488035 ADGRB2O60241 1585 aa0.52□□□□□ -2.33
R3HDM1-219ENST00000488035 RIMBP3CA6NJZ7 1639 aa0.52□□□□□ -2.33
R3HDM1-219ENST00000488035 RIMBP3BA6NNM3 1639 aa0.52□□□□□ -2.33
R3HDM1-219ENST00000488035 RIMBP3Q9UFD9 1639 aa0.52□□□□□ -2.33
R3HDM1-219ENST00000488035 LAMB4A4D0S4 1761 aa0.52□□□□□ -2.33
R3HDM1-219ENST00000488035 TAF1LQ8IZX4 1826 aa0.52□□□□□ -2.33
R3HDM1-219ENST00000488035 OBSL1O75147 1896 aa0.52□□□□□ -2.33
R3HDM1-219ENST00000488035 AHNAKQ09666 5890 aaKnown RBP0.51□□□□□ -2.33
R3HDM1-219ENST00000488035 TRAV4A0A0B4J268 109 aa0.51□□□□□ -2.33
R3HDM1-219ENST00000488035 C7orf71A4D174 169 aa0.51□□□□□ -2.33
R3HDM1-219ENST00000488035 FAM159BA6NKW6 160 aa0.51□□□□□ -2.33
R3HDM1-219ENST00000488035 B4DSR2 109 aa0.51□□□□□ -2.33
R3HDM1-219ENST00000488035 OR7C1O76099 320 aaPredicted RBP0.51□□□□□ -2.33
R3HDM1-219ENST00000488035 PROSCO94903 275 aa0.51□□□□□ -2.33
R3HDM1-219ENST00000488035 CYBAP13498 195 aa0.51□□□□□ -2.33
R3HDM1-219ENST00000488035 PIGPP57054 158 aa0.51□□□□□ -2.33
R3HDM1-219ENST00000488035 LAMA4Q16363 1823 aa0.51□□□□□ -2.33
R3HDM1-219ENST00000488035 SOSTDC1Q6X4U4 206 aa0.51□□□□□ -2.33
R3HDM1-219ENST00000488035 LINC00301Q8NCQ3 95 aa0.51□□□□□ -2.33
R3HDM1-219ENST00000488035 C6orf62Q9GZU0 229 aaPredicted RBP0.51□□□□□ -2.33
R3HDM1-219ENST00000488035 RNF122Q9H9V4 155 aa0.51□□□□□ -2.33
R3HDM1-219ENST00000488035 NHP2Q9NX24 153 aaKnown RBP0.51□□□□□ -2.33
R3HDM1-219ENST00000488035 CHCHD2Q9Y6H1 151 aaPredicted RBP0.51□□□□□ -2.33
R3HDM1-219ENST00000488035 KIAA1549Q9HCM3 1950 aa0.5□□□□□ -2.33
R3HDM1-219ENST00000488035 NCOA1Q15788 1441 aa0.5□□□□□ -2.33
R3HDM1-219ENST00000488035 RTL1A6NKG5 1358 aa0.5□□□□□ -2.33
R3HDM1-219ENST00000488035 ATP5G3P48201 142 aa0.5□□□□□ -2.33
R3HDM1-219ENST00000488035 EIF5AP63241 154 aaKnown RBP0.5□□□□□ -2.33
R3HDM1-219ENST00000488035 PDZD9Q8IXQ8 264 aa0.5□□□□□ -2.33
R3HDM1-219ENST00000488035 MNS1Q8NEH6 495 aa0.5□□□□□ -2.33
R3HDM1-219ENST00000488035 SLC30A7Q8NEW0 376 aa0.5□□□□□ -2.33
R3HDM1-219ENST00000488035 OR11H6Q8NGC7 330 aa0.5□□□□□ -2.33
R3HDM1-219ENST00000488035 OR2T10Q8NGZ9 312 aa0.5□□□□□ -2.33
R3HDM1-219ENST00000488035 FAM172AQ8WUF8 416 aa0.5□□□□□ -2.33
R3HDM1-219ENST00000488035 ITFG2Q969R8 447 aa0.5□□□□□ -2.33
R3HDM1-219ENST00000488035 KIFC1Q9BW19 673 aa0.5□□□□□ -2.33
R3HDM1-219ENST00000488035 TMEM126AQ9H061 195 aa0.5□□□□□ -2.33
R3HDM1-219ENST00000488035 KIF1BO60333 1816 aa0.5□□□□□ -2.33
R3HDM1-219ENST00000488035 PCF11O94913 1555 aaKnown RBP0.49□□□□□ -2.33
R3HDM1-219ENST00000488035 UNC13CQ8NB66 2214 aa0.49□□□□□ -2.33
R3HDM1-219ENST00000488035 MDN1Q9NU22 5596 aa0.49□□□□□ -2.33
R3HDM1-219ENST00000488035 CCL25O15444 150 aa0.49□□□□□ -2.33
R3HDM1-219ENST00000488035 TIMM17BO60830 172 aa0.49□□□□□ -2.33
R3HDM1-219ENST00000488035 IFNA6P05013 189 aa0.49□□□□□ -2.33
R3HDM1-219ENST00000488035 PRB4P10163 310 aaPredicted RBP0.49□□□□□ -2.33
R3HDM1-219ENST00000488035 ERP29P30040 261 aaKnown RBP0.49□□□□□ -2.33
R3HDM1-219ENST00000488035 RRN3P1Q2M238 152 aa0.49□□□□□ -2.33
R3HDM1-219ENST00000488035 MPV17LQ2QL34 196 aa0.49□□□□□ -2.33
R3HDM1-219ENST00000488035 Q8N6K4 173 aa0.49□□□□□ -2.33
R3HDM1-219ENST00000488035 PARVBQ9HBI1 364 aa0.49□□□□□ -2.33
R3HDM1-219ENST00000488035 ENY2Q9NPA8 101 aa0.49□□□□□ -2.33
R3HDM1-219ENST00000488035 RASL12Q9NYN1 266 aa0.49□□□□□ -2.33
R3HDM1-219ENST00000488035 FAM32AQ9Y421 112 aaKnown RBP0.49□□□□□ -2.33
R3HDM1-219ENST00000488035 MED12Q93074 2177 aa0.49□□□□□ -2.33
R3HDM1-219ENST00000488035 PLXNA4Q9HCM2 1894 aa0.48□□□□□ -2.33
R3HDM1-219ENST00000488035 J3QRK9 145 aa0.48□□□□□ -2.33
R3HDM1-219ENST00000488035 CCL16O15467 120 aa0.48□□□□□ -2.33
R3HDM1-219ENST00000488035 DNAL4O96015 105 aa0.48□□□□□ -2.33
R3HDM1-219ENST00000488035 CST2P09228 141 aa0.48□□□□□ -2.33
R3HDM1-219ENST00000488035 SRP14P37108 136 aaKnown RBP0.48□□□□□ -2.33
R3HDM1-219ENST00000488035 ANP32AP39687 249 aaKnown RBP0.48□□□□□ -2.33
R3HDM1-219ENST00000488035 ROMO1P60602 79 aa0.48□□□□□ -2.33
R3HDM1-219ENST00000488035 FADDQ13158 208 aa0.48□□□□□ -2.33
R3HDM1-219ENST00000488035 KRR1Q13601 381 aaKnown RBP0.48□□□□□ -2.33
R3HDM1-219ENST00000488035 LIN52Q52LA3 116 aa0.48□□□□□ -2.33
R3HDM1-219ENST00000488035 OR2T35Q8NGX2 323 aa0.48□□□□□ -2.33
R3HDM1-219ENST00000488035 GNPDA2Q8TDQ7 276 aa0.48□□□□□ -2.33
R3HDM1-219ENST00000488035 PATE1Q8WXA2 126 aa0.48□□□□□ -2.33
R3HDM1-219ENST00000488035 NMNAT1Q9HAN9 279 aaPredicted RBP0.48□□□□□ -2.33
R3HDM1-219ENST00000488035 C14orf132Q9NPU4 83 aa0.48□□□□□ -2.33
R3HDM1-219ENST00000488035 TAS2R7Q9NYW3 318 aa0.48□□□□□ -2.33
R3HDM1-219ENST00000488035 E9PCH4 1651 aa0.48□□□□□ -2.33
R3HDM1-219ENST00000488035 CNTRLQ7Z7A1 2325 aa0.47□□□□□ -2.33
R3HDM1-219ENST00000488035 DOCK4Q8N1I0 1966 aa0.47□□□□□ -2.33
R3HDM1-219ENST00000488035 TRBV19A0A075B6N1 114 aa0.47□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms