RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 IFNA1P01562 189 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 IFNA14P01570 189 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 IGLV3-1P01715 115 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 TFF1P04155 84 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 TCRBP04435 133 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 MT1FP04733 61 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 CRHP06850 196 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 IFI6P09912 130 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 OR5G3P0C626 314 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 MT1HL1P0DM35 61 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 CYBAP13498 195 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 MT1GP13640 62 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 SPRR1BP22528 89 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 SPRR1AP35321 89 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 ETV6P41212 452 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 MT1XP80297 61 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 PMAIP1Q13794 54 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 CIRBPQ14011 172 aaKnown RBP-0.01□□□□□ -2.41
SMC4-219ENST00000487747 RHEBQ15382 184 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 KCNJ8Q15842 424 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 IMPG1Q17R60 797 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 RGS21Q2M5E4 152 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 DEFB112Q30KQ8 113 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 KRTAP20-1Q3LI63 56 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 DEFB121Q5J5C9 76 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 GLYATL3Q5SZD4 288 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 HAGHLQ6PII5 290 aaPredicted RBP-0.01□□□□□ -2.41
SMC4-219ENST00000487747 DHRS4L2Q6PKH6 230 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 CD200R1LQ6Q8B3 271 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 C3orf62Q6ZUJ4 267 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 MIR17HGQ75NE6 70 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 PHF5AQ7RTV0 110 aaKnown RBP-0.01□□□□□ -2.41
SMC4-219ENST00000487747 DEFB132Q7Z7B7 95 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 MT1MQ8N339 61 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 C3orf56Q8N813 242 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 WFDC9Q8NEX5 89 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 OR4E2Q8NGC2 313 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 OR10J5Q8NHC4 309 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 MCFD2Q8NI22 146 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 WFDC5Q8TCV5 224 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 FAM172AQ8WUF8 416 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 NAT14Q8WUY8 206 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 SFT2D1Q8WV19 159 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 KLK6Q92876 244 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 RAB8BQ92930 207 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 ITFG2Q969R8 447 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 SLC35B4Q969S0 331 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 YPEL2Q96QA6 119 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 SDF2Q99470 211 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 ULBP3Q9BZM4 244 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 BPESC1Q9GZL8 116 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 OR51I1Q9H343 314 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 FAM96AQ9H5X1 160 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 RNF122Q9H9V4 155 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 XPNPEP1Q9NQW7 623 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 ACER3Q9NUN7 267 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 UQCC1Q9NVA1 299 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 MED29Q9NX70 200 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 IL20Q9NYY1 176 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 SMPXQ9UHP9 88 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 STOML2Q9UJZ1 356 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 HS3ST2Q9Y278 367 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 NOSIPQ9Y314 301 aaKnown RBP-0.01□□□□□ -2.41
SMC4-219ENST00000487747 GPR98Q8WXG9 6306 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 PHLPP1O60346 1717 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 ZNF142P52746 1687 aaPredicted RBP-0.02□□□□□ -2.41
SMC4-219ENST00000487747 KDM6BO15054 1643 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 DEPDC5O75140 1603 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 NHSL1Q5SYE7 1610 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 PHRF1Q9P1Y6 1649 aaKnown RBP-0.02□□□□□ -2.41
SMC4-219ENST00000487747 EIF4G3O43432 1585 aaKnown RBP-0.02□□□□□ -2.41
SMC4-219ENST00000487747 PLXNC1O60486 1568 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 HECW2Q9P2P5 1572 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 EFCAB5A4FU69 1503 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 NFAT5O94916 1531 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 TOP2AP11388 1531 aaKnown RBP-0.02□□□□□ -2.41
SMC4-219ENST00000487747 AGLP35573 1532 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 ARHGAP5Q13017 1502 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 NEXMIFQ5QGS0 1516 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 TULP4Q9NRJ4 1543 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 UGGT2Q9NYU1 1516 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 A2MP01023 1474 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 MRC1P22897 1456 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 ATP7BP35670 1465 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 PLEKHH2Q8IVE3 1493 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 PXDNQ92626 1479 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 FYCO1Q9BQS8 1478 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 CCDC144AA2RUR9 1427 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 PIK3C2GO75747 1445 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 CEP162Q5TB80 1403 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 C9orf84Q5VXU9 1444 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 TRAPPC8Q9Y2L5 1435 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 RTL9Q8NET4 1388 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 CCNB3Q8WWL7 1395 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 MYO3BQ8WXR4 1341 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 DSPPQ9NZW4 1301 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 A0A087WUJ7 227 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 IGLV3-32A0A0A0MS00 114 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 LOC101927531A0A1B0GV80 90 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 LOC285095A0A1B0GVY8 99 aa-0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms