RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 HSD52Q0P140 79 aa8.59□□□□□ -1.03
CCDC171-208ENST00000486641 SMAGPQ0VAQ4 97 aa8.59□□□□□ -1.03
CCDC171-208ENST00000486641 CR1LQ2VPA4 569 aa8.59□□□□□ -1.03
CCDC171-208ENST00000486641 OR1L8Q8NGR8 309 aa8.59□□□□□ -1.03
CCDC171-208ENST00000486641 SIGMAR1Q99720 223 aa8.59□□□□□ -1.03
CCDC171-208ENST00000486641 GFRA4Q9GZZ7 299 aa8.59□□□□□ -1.03
CCDC171-208ENST00000486641 AP5S1Q9NUS5 200 aa8.59□□□□□ -1.03
CCDC171-208ENST00000486641 THYN1Q9P016 225 aa8.59□□□□□ -1.03
CCDC171-208ENST00000486641 SMPXQ9UHP9 88 aa8.59□□□□□ -1.03
CCDC171-208ENST00000486641 DYSFO75923 2080 aa8.59□□□□□ -1.03
CCDC171-208ENST00000486641 PI4KAP42356 2102 aa8.58□□□□□ -1.04
CCDC171-208ENST00000486641 HAX1O00165 279 aa8.58□□□□□ -1.04
CCDC171-208ENST00000486641 IGHV3-48P01763 117 aa8.58□□□□□ -1.04
CCDC171-208ENST00000486641 FAM106CPP0CH98 169 aa8.58□□□□□ -1.04
CCDC171-208ENST00000486641 SCGB1A1P11684 91 aa8.58□□□□□ -1.04
CCDC171-208ENST00000486641 ACP1P24666 158 aa8.58□□□□□ -1.04
CCDC171-208ENST00000486641 CEACAM3P40198 252 aa8.58□□□□□ -1.04
CCDC171-208ENST00000486641 POU2AF1Q16633 256 aa8.58□□□□□ -1.04
CCDC171-208ENST00000486641 FAM106AQ4KMX7 169 aa8.58□□□□□ -1.04
CCDC171-208ENST00000486641 Q5PR19 223 aa8.58□□□□□ -1.04
CCDC171-208ENST00000486641 PDPNQ86YL7 162 aa8.58□□□□□ -1.04
CCDC171-208ENST00000486641 ZNRF1Q8ND25 227 aa8.58□□□□□ -1.04
CCDC171-208ENST00000486641 SAP25Q8TEE9 199 aa8.58□□□□□ -1.04
CCDC171-208ENST00000486641 DPF1Q92782 380 aa8.58□□□□□ -1.04
CCDC171-208ENST00000486641 DAZAP1Q96EP5 407 aaKnown RBP8.58□□□□□ -1.04
CCDC171-208ENST00000486641 ABHD17AQ96GS6 310 aa8.58□□□□□ -1.04
CCDC171-208ENST00000486641 INSIG2Q9Y5U4 225 aa8.58□□□□□ -1.04
CCDC171-208ENST00000486641 SMAD7O15105 426 aaKnown RBP8.58□□□□□ -1.04
CCDC171-208ENST00000486641 IGKV1-16P04430 117 aa8.58□□□□□ -1.04
CCDC171-208ENST00000486641 HOXC12P31275 282 aa8.58□□□□□ -1.04
CCDC171-208ENST00000486641 LINC00305Q7Z4B0 112 aa8.58□□□□□ -1.04
CCDC171-208ENST00000486641 OR8A1Q8NGG7 326 aa8.58□□□□□ -1.04
CCDC171-208ENST00000486641 OR1L4Q8NGR5 311 aa8.58□□□□□ -1.04
CCDC171-208ENST00000486641 TTTY12Q9BZ98 90 aa8.58□□□□□ -1.04
CCDC171-208ENST00000486641 CALYQ9NYX4 217 aa8.58□□□□□ -1.04
CCDC171-208ENST00000486641 ZNF492Q9P255 531 aa8.58□□□□□ -1.04
CCDC171-208ENST00000486641 B4GALT7Q9UBV7 327 aa8.58□□□□□ -1.04
CCDC171-208ENST00000486641 IGHV3OR15-7A0A075B7D8 119 aa8.57□□□□□ -1.04
CCDC171-208ENST00000486641 OVOL3O00110 214 aa8.57□□□□□ -1.04
CCDC171-208ENST00000486641 LTAP01374 205 aa8.57□□□□□ -1.04
CCDC171-208ENST00000486641 FABP2P12104 132 aa8.57□□□□□ -1.04
CCDC171-208ENST00000486641 TMEM108Q6UXF1 575 aa8.57□□□□□ -1.04
CCDC171-208ENST00000486641 OR2Z1Q8NG97 314 aa8.57□□□□□ -1.04
CCDC171-208ENST00000486641 PRSS3P2Q8NHM4 247 aa8.57□□□□□ -1.04
CCDC171-208ENST00000486641 CACNG8Q8WXS5 425 aa8.57□□□□□ -1.04
CCDC171-208ENST00000486641 FAM186AA6NE01 2351 aa8.57□□□□□ -1.04
CCDC171-208ENST00000486641 TIMM8AO60220 97 aaPredicted RBP8.57□□□□□ -1.04
CCDC171-208ENST00000486641 CSN1S1P47710 185 aa8.57□□□□□ -1.04
CCDC171-208ENST00000486641 ATP5IP56385 69 aaPredicted RBP8.57□□□□□ -1.04
CCDC171-208ENST00000486641 C17orf58Q2M2W7 97 aa8.57□□□□□ -1.04
CCDC171-208ENST00000486641 SAMD5Q5TGI4 173 aa8.57□□□□□ -1.04
CCDC171-208ENST00000486641 OR9G4Q8NGQ1 327 aa8.57□□□□□ -1.04
CCDC171-208ENST00000486641 NPIPB3Q92617 1050 aa8.57□□□□□ -1.04
CCDC171-208ENST00000486641 CACNA1EQ15878 2313 aa8.56□□□□□ -1.04
CCDC171-208ENST00000486641 PCNX2A6NKB5 2137 aa8.56□□□□□ -1.04
CCDC171-208ENST00000486641 IGKV1D-37A0A075B6S9 117 aa8.56□□□□□ -1.04
CCDC171-208ENST00000486641 A0A096LNJ9 63 aa8.56□□□□□ -1.04
CCDC171-208ENST00000486641 TMEM189A5PLL7 270 aa8.56□□□□□ -1.04
CCDC171-208ENST00000486641 E7EUB6 86 aa8.56□□□□□ -1.04
CCDC171-208ENST00000486641 DLL1O00548 723 aa8.56□□□□□ -1.04
CCDC171-208ENST00000486641 SIVA1O15304 175 aa8.56□□□□□ -1.04
CCDC171-208ENST00000486641 LYZL6O75951 148 aa8.56□□□□□ -1.04
CCDC171-208ENST00000486641 LOXL1Q08397 574 aaPredicted RBP8.56□□□□□ -1.04
CCDC171-208ENST00000486641 FA2HQ7L5A8 372 aa8.56□□□□□ -1.04
CCDC171-208ENST00000486641 OR4X2Q8NGF9 303 aa8.56□□□□□ -1.04
CCDC171-208ENST00000486641 WFDC12Q8WWY7 111 aa8.56□□□□□ -1.04
CCDC171-208ENST00000486641 FMC1Q96HJ9 113 aa8.56□□□□□ -1.04
CCDC171-208ENST00000486641 TCRBV4S1A1TA0A5B7 111 aa8.55□□□□□ -1.04
CCDC171-208ENST00000486641 NPIPB6E9PJ23 425 aa8.55□□□□□ -1.04
CCDC171-208ENST00000486641 H3BTX0 84 aa8.55□□□□□ -1.04
CCDC171-208ENST00000486641 CGB3P0DN86 165 aa8.55□□□□□ -1.04
CCDC171-208ENST00000486641 CGB7P0DN87 165 aa8.55□□□□□ -1.04
CCDC171-208ENST00000486641 Q71RC1 249 aaPredicted RBP8.55□□□□□ -1.04
CCDC171-208ENST00000486641 PCP2Q8IVA1 136 aa8.55□□□□□ -1.04
CCDC171-208ENST00000486641 CIARTQ8N365 385 aaPredicted RBP8.55□□□□□ -1.04
CCDC171-208ENST00000486641 ZADH2Q8N4Q0 377 aa8.55□□□□□ -1.04
CCDC171-208ENST00000486641 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.55□□□□□ -1.04
CCDC171-208ENST00000486641 ATP6V0BQ99437 205 aa8.55□□□□□ -1.04
CCDC171-208ENST00000486641 KNTC1P50748 2209 aa8.55□□□□□ -1.04
CCDC171-208ENST00000486641 A0A1B0GV72 72 aa8.55□□□□□ -1.04
CCDC171-208ENST00000486641 SAA1P0DJI8 122 aaPredicted RBP8.55□□□□□ -1.04
CCDC171-208ENST00000486641 CT45A6P0DMU7 189 aa8.55□□□□□ -1.04
CCDC171-208ENST00000486641 CT45A5P0DMU8 189 aa8.55□□□□□ -1.04
CCDC171-208ENST00000486641 CT45A7P0DMV0 189 aa8.55□□□□□ -1.04
CCDC171-208ENST00000486641 IGHV1-2P23083 117 aa8.55□□□□□ -1.04
CCDC171-208ENST00000486641 COL8A1P27658 744 aa8.55□□□□□ -1.04
CCDC171-208ENST00000486641 IFI27P40305 119 aaPredicted RBP8.55□□□□□ -1.04
CCDC171-208ENST00000486641 TM4SF20Q53R12 229 aa8.55□□□□□ -1.04
CCDC171-208ENST00000486641 TIMM23BQ5SRD1 257 aa8.55□□□□□ -1.04
CCDC171-208ENST00000486641 RBMXL3Q8N7X1 1067 aaKnown RBP8.55□□□□□ -1.04
CCDC171-208ENST00000486641 OR5AN1Q8NGI8 311 aa8.55□□□□□ -1.04
CCDC171-208ENST00000486641 MRPL36Q9P0J6 103 aaKnown RBP8.55□□□□□ -1.04
CCDC171-208ENST00000486641 TSSC4Q9Y5U2 329 aaPredicted RBP8.55□□□□□ -1.04
CCDC171-208ENST00000486641 GAGE12HA6NDE8 117 aa8.54□□□□□ -1.04
CCDC171-208ENST00000486641 ZNF207O43670 478 aaKnown RBP8.54□□□□□ -1.04
CCDC171-208ENST00000486641 TCRAP04437 139 aa8.54□□□□□ -1.04
CCDC171-208ENST00000486641 ARMS2P0C7Q2 107 aa8.54□□□□□ -1.04
CCDC171-208ENST00000486641 SMIM13P0DJ93 91 aa8.54□□□□□ -1.04
CCDC171-208ENST00000486641 ORM2P19652 201 aa8.54□□□□□ -1.04
CCDC171-208ENST00000486641 FCGR2BP31994 310 aaPredicted RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms