RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 JTBO76095 146 aa13.29□□□□□ -0.28
MCF2L-226ENST00000486210 IGKV1-17P01599 117 aa13.29□□□□□ -0.28
MCF2L-226ENST00000486210 IGLC1P0CG04 106 aa13.29□□□□□ -0.28
MCF2L-226ENST00000486210 OR10J1P30954 320 aa13.29□□□□□ -0.28
MCF2L-226ENST00000486210 SLC38A11Q08AI6 406 aa13.29□□□□□ -0.28
MCF2L-226ENST00000486210 SPSB3Q6PJ21 355 aa13.29□□□□□ -0.28
MCF2L-226ENST00000486210 SLC25A31Q9H0C2 315 aa13.29□□□□□ -0.28
MCF2L-226ENST00000486210 TUBA4BQ9H853 241 aa13.29□□□□□ -0.28
MCF2L-226ENST00000486210 PEMTQ9UBM1 199 aa13.29□□□□□ -0.28
MCF2L-226ENST00000486210 IGKV1OR2-108A0A075B7D4 117 aa13.28□□□□□ -0.28
MCF2L-226ENST00000486210 SMCO3A2RU48 225 aa13.28□□□□□ -0.28
MCF2L-226ENST00000486210 NUPL2O15504 423 aaKnown RBP13.28□□□□□ -0.28
MCF2L-226ENST00000486210 RPL12P30050 165 aaKnown RBP13.28□□□□□ -0.28
MCF2L-226ENST00000486210 HAGHQ16775 308 aa13.28□□□□□ -0.28
MCF2L-226ENST00000486210 UNQ9165/PRO28630Q6UXU0 137 aa13.28□□□□□ -0.28
MCF2L-226ENST00000486210 STX12Q86Y82 276 aa13.28□□□□□ -0.28
MCF2L-226ENST00000486210 HERC2O95714 4834 aa13.28□□□□□ -0.28
MCF2L-226ENST00000486210 FXYD6-FXYD2A0A087WZ82 144 aa13.27□□□□□ -0.29
MCF2L-226ENST00000486210 GPHB5Q86YW7 130 aa13.27□□□□□ -0.29
MCF2L-226ENST00000486210 THAP8Q8NA92 274 aa13.27□□□□□ -0.29
MCF2L-226ENST00000486210 OR1S2Q8NGQ3 325 aa13.27□□□□□ -0.29
MCF2L-226ENST00000486210 HSPB11Q9Y547 144 aa13.27□□□□□ -0.29
MCF2L-226ENST00000486210 IGHV3OR16-8A0A075B7F1 116 aa13.26□□□□□ -0.29
MCF2L-226ENST00000486210 TRAV30A0A087WSZ9 112 aa13.26□□□□□ -0.29
MCF2L-226ENST00000486210 EDN2P20800 178 aa13.26□□□□□ -0.29
MCF2L-226ENST00000486210 S100A11P31949 105 aa13.26□□□□□ -0.29
MCF2L-226ENST00000486210 ZNF90Q03938 601 aa13.26□□□□□ -0.29
MCF2L-226ENST00000486210 AKR1C1Q04828 323 aa13.26□□□□□ -0.29
MCF2L-226ENST00000486210 CD300CQ08708 224 aa13.26□□□□□ -0.29
MCF2L-226ENST00000486210 TMEM144Q7Z5S9 345 aa13.26□□□□□ -0.29
MCF2L-226ENST00000486210 OR11H4Q8NGC9 324 aa13.26□□□□□ -0.29
MCF2L-226ENST00000486210 OR5C1Q8NGR4 320 aa13.26□□□□□ -0.29
MCF2L-226ENST00000486210 GGACTQ9BVM4 153 aa13.26□□□□□ -0.29
MCF2L-226ENST00000486210 ZFP92A6NM28 416 aa13.25□□□□□ -0.29
MCF2L-226ENST00000486210 FNDC10F2Z333 226 aa13.25□□□□□ -0.29
MCF2L-226ENST00000486210 BAXQ07812 192 aa13.25□□□□□ -0.29
MCF2L-226ENST00000486210 VWC2Q2TAL6 325 aa13.25□□□□□ -0.29
MCF2L-226ENST00000486210 LILRB2Q8N423 598 aa13.25□□□□□ -0.29
MCF2L-226ENST00000486210 OR2K2Q8NGT1 345 aa13.25□□□□□ -0.29
MCF2L-226ENST00000486210 SMIM3Q9BZL3 60 aa13.25□□□□□ -0.29
MCF2L-226ENST00000486210 NPVFQ9HCQ7 196 aa13.25□□□□□ -0.29
MCF2L-226ENST00000486210 SIGLEC8Q9NYZ4 499 aa13.25□□□□□ -0.29
MCF2L-226ENST00000486210 TNFSF18Q9UNG2 199 aa13.25□□□□□ -0.29
MCF2L-226ENST00000486210 ZNF320A2RRD8 509 aa13.24□□□□□ -0.29
MCF2L-226ENST00000486210 RNF222A6NCQ9 220 aa13.24□□□□□ -0.29
MCF2L-226ENST00000486210 NDUFA4O00483 81 aa13.24□□□□□ -0.29
MCF2L-226ENST00000486210 SCAF4O95104 1147 aaKnown RBP13.24□□□□□ -0.29
MCF2L-226ENST00000486210 HBG1P69891 147 aa13.24□□□□□ -0.29
MCF2L-226ENST00000486210 HBG2P69892 147 aa13.24□□□□□ -0.29
MCF2L-226ENST00000486210 RELQ04864 619 aaPredicted RBP13.24□□□□□ -0.29
MCF2L-226ENST00000486210 CLINT1Q14677 625 aa13.24□□□□□ -0.29
MCF2L-226ENST00000486210 FAM106AQ4KMX7 169 aa13.24□□□□□ -0.29
MCF2L-226ENST00000486210 TOMM20LQ6UXN7 152 aa13.24□□□□□ -0.29
MCF2L-226ENST00000486210 IL34Q6ZMJ4 242 aa13.24□□□□□ -0.29
MCF2L-226ENST00000486210 ZNF600Q6ZNG1 722 aa13.24□□□□□ -0.29
MCF2L-226ENST00000486210 TMEM182Q6ZP80 229 aaPredicted RBP13.24□□□□□ -0.29
MCF2L-226ENST00000486210 ZNF546Q86UE3 836 aa13.24□□□□□ -0.29
MCF2L-226ENST00000486210 DYNLRB2Q8TF09 96 aa13.24□□□□□ -0.29
MCF2L-226ENST00000486210 AQP10Q96PS8 301 aa13.24□□□□□ -0.29
MCF2L-226ENST00000486210 TRGV9Q99603 122 aa13.24□□□□□ -0.29
MCF2L-226ENST00000486210 TMEM147Q9BVK8 224 aa13.24□□□□□ -0.29
MCF2L-226ENST00000486210 WFDC1Q9HC57 220 aa13.24□□□□□ -0.29
MCF2L-226ENST00000486210 RETNQ9HD89 108 aa13.24□□□□□ -0.29
MCF2L-226ENST00000486210 UQCC1Q9NVA1 299 aa13.24□□□□□ -0.29
MCF2L-226ENST00000486210 PUS1Q9Y606 427 aaKnown RBP eCLIP13.24□□□□□ -0.29
MCF2L-226ENST00000486210 LGALS9O00182 355 aa13.23□□□□□ -0.29
MCF2L-226ENST00000486210 ZNF207O43670 478 aaKnown RBP13.23□□□□□ -0.29
MCF2L-226ENST00000486210 YIF1AO95070 293 aa13.23□□□□□ -0.29
MCF2L-226ENST00000486210 CSN3P07498 182 aa13.23□□□□□ -0.29
MCF2L-226ENST00000486210 YPEL3P61236 119 aaPredicted RBP13.23□□□□□ -0.29
MCF2L-226ENST00000486210 OR2F1Q13607 317 aa13.23□□□□□ -0.29
MCF2L-226ENST00000486210 ATP6V1FQ16864 119 aa13.23□□□□□ -0.29
MCF2L-226ENST00000486210 TM4SF20Q53R12 229 aa13.23□□□□□ -0.29
MCF2L-226ENST00000486210 AKAP14Q86UN6 197 aa13.23□□□□□ -0.29
MCF2L-226ENST00000486210 TCTE3Q8IZS6 198 aa13.23□□□□□ -0.29
MCF2L-226ENST00000486210 TMEM190Q8WZ59 177 aa13.23□□□□□ -0.29
MCF2L-226ENST00000486210 C20orf24Q9BUV8 137 aa13.23□□□□□ -0.29
MCF2L-226ENST00000486210 ZFAND3Q9H8U3 227 aa13.23□□□□□ -0.29
MCF2L-226ENST00000486210 UBE2L5PA0A1B0GUS4 154 aa13.22□□□□□ -0.29
MCF2L-226ENST00000486210 TOMM40O96008 361 aa13.22□□□□□ -0.29
MCF2L-226ENST00000486210 PSG1P11464 419 aa13.22□□□□□ -0.29
MCF2L-226ENST00000486210 GATA2P23769 480 aaPredicted RBP13.22□□□□□ -0.29
MCF2L-226ENST00000486210 MGST2Q99735 147 aa13.22□□□□□ -0.29
MCF2L-226ENST00000486210 WDR83OSQ9Y284 106 aa13.22□□□□□ -0.29
MCF2L-226ENST00000486210 TMEM213A2RRL7 107 aa13.21□□□□□ -0.29
MCF2L-226ENST00000486210 ARPC5O15511 151 aa13.21□□□□□ -0.29
MCF2L-226ENST00000486210 SCGB2A1O75556 95 aa13.21□□□□□ -0.29
MCF2L-226ENST00000486210 RD3LP0DJH9 198 aa13.21□□□□□ -0.29
MCF2L-226ENST00000486210 NUP62P37198 522 aaPredicted RBP13.21□□□□□ -0.29
MCF2L-226ENST00000486210 AP2S1P53680 142 aaPredicted RBP13.21□□□□□ -0.29
MCF2L-226ENST00000486210 TEPPQ6URK8 271 aa13.21□□□□□ -0.29
MCF2L-226ENST00000486210 CYP2G1PQ6ZSU1 146 aa13.21□□□□□ -0.29
MCF2L-226ENST00000486210 Q8WTZ3 238 aa13.21□□□□□ -0.29
MCF2L-226ENST00000486210 NEURL2Q9BR09 285 aa13.21□□□□□ -0.29
MCF2L-226ENST00000486210 FBXL17Q9UF56 701 aa13.21□□□□□ -0.29
MCF2L-226ENST00000486210 C2orf70A6NJV1 201 aa13.2□□□□□ -0.3
MCF2L-226ENST00000486210 A8MWP6 167 aa13.2□□□□□ -0.3
MCF2L-226ENST00000486210 CD81P60033 236 aa13.2□□□□□ -0.3
MCF2L-226ENST00000486210 BTNL8Q6UX41 500 aa13.2□□□□□ -0.3
MCF2L-226ENST00000486210 INO80EQ8NBZ0 244 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms