RNA–Protein interactions for RNA: ENST00000485955.1

VPS41-213, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-213ENST00000485955 M0R1X1 148 aa1.81□□□□□ -2.12
VPS41-213ENST00000485955 PIRO00625 290 aa1.81□□□□□ -2.12
VPS41-213ENST00000485955 ISLRO14498 428 aa1.81□□□□□ -2.12
VPS41-213ENST00000485955 MRASO14807 208 aa1.81□□□□□ -2.12
VPS41-213ENST00000485955 RGS5O15539 181 aa1.81□□□□□ -2.12
VPS41-213ENST00000485955 ZNF682O95780 498 aa1.81□□□□□ -2.12
VPS41-213ENST00000485955 BGLAPP02818 100 aa1.81□□□□□ -2.12
VPS41-213ENST00000485955 IGKV4-1P06312 121 aa1.81□□□□□ -2.12
VPS41-213ENST00000485955 C8GP07360 202 aa1.81□□□□□ -2.12
VPS41-213ENST00000485955 SOD3P08294 240 aa1.81□□□□□ -2.12
VPS41-213ENST00000485955 TSPAN19P0C672 248 aa1.81□□□□□ -2.12
VPS41-213ENST00000485955 METTL15P1P0C7V9 234 aa1.81□□□□□ -2.12
VPS41-213ENST00000485955 CTSEP14091 401 aa1.81□□□□□ -2.12
VPS41-213ENST00000485955 RPL7P18124 248 aaKnown RBP1.81□□□□□ -2.12
VPS41-213ENST00000485955 IL1RNP18510 177 aa1.81□□□□□ -2.12
VPS41-213ENST00000485955 IL3RAP26951 378 aa1.81□□□□□ -2.12
VPS41-213ENST00000485955 CNTFRP26992 372 aa1.81□□□□□ -2.12
VPS41-213ENST00000485955 IMPA1P29218 277 aa1.81□□□□□ -2.12
VPS41-213ENST00000485955 RBP2P50120 134 aa1.81□□□□□ -2.12
VPS41-213ENST00000485955 KRTAP12-4P60329 112 aa1.81□□□□□ -2.12
VPS41-213ENST00000485955 RPS28P62857 69 aaKnown RBP1.81□□□□□ -2.12
VPS41-213ENST00000485955 GRB2P62993 217 aaKnown RBP1.81□□□□□ -2.12
VPS41-213ENST00000485955 CRADDP78560 199 aa1.81□□□□□ -2.12
VPS41-213ENST00000485955 ADIGQ0VDE8 80 aa1.81□□□□□ -2.12
VPS41-213ENST00000485955 CCL15Q16663 113 aa1.81□□□□□ -2.12
VPS41-213ENST00000485955 ORMDL2Q53FV1 153 aa1.81□□□□□ -2.12
VPS41-213ENST00000485955 ZNF773Q6PK81 442 aa1.81□□□□□ -2.12
VPS41-213ENST00000485955 TCF23Q7RTU1 214 aa1.81□□□□□ -2.12
VPS41-213ENST00000485955 DRAM1Q8N682 238 aa1.81□□□□□ -2.12
VPS41-213ENST00000485955 TMEM75Q8N9X5 138 aa1.81□□□□□ -2.12
VPS41-213ENST00000485955 SLC30A7Q8NEW0 376 aa1.81□□□□□ -2.12
VPS41-213ENST00000485955 TSTD1Q8NFU3 115 aa1.81□□□□□ -2.12
VPS41-213ENST00000485955 OR2T27Q8NH04 317 aa1.81□□□□□ -2.12
VPS41-213ENST00000485955 ORAOV1Q8WV07 137 aa1.81□□□□□ -2.12
VPS41-213ENST00000485955 TWIST2Q8WVJ9 160 aa1.81□□□□□ -2.12
VPS41-213ENST00000485955 ARL11Q969Q4 196 aa1.81□□□□□ -2.12
VPS41-213ENST00000485955 NARS2Q96I59 477 aaKnown RBP1.81□□□□□ -2.12
VPS41-213ENST00000485955 IGF2BP2-AS1Q96M15 143 aa1.81□□□□□ -2.12
VPS41-213ENST00000485955 IP6K3Q96PC2 410 aa1.81□□□□□ -2.12
VPS41-213ENST00000485955 OR2A5Q96R48 311 aa1.81□□□□□ -2.12
VPS41-213ENST00000485955 ANAPC13Q9BS18 74 aa1.81□□□□□ -2.12
VPS41-213ENST00000485955 ZNF436Q9C0F3 470 aaPredicted RBP1.81□□□□□ -2.12
VPS41-213ENST00000485955 C20orf27Q9GZN8 174 aa1.81□□□□□ -2.12
VPS41-213ENST00000485955 PBOV1Q9GZY1 135 aa1.81□□□□□ -2.12
VPS41-213ENST00000485955 KCNIP2Q9NS61 270 aa1.81□□□□□ -2.12
VPS41-213ENST00000485955 DHCR7Q9UBM7 475 aaKnown RBP1.81□□□□□ -2.12
VPS41-213ENST00000485955 GNG8Q9UK08 70 aa1.81□□□□□ -2.12
VPS41-213ENST00000485955 U3KQ87 197 aa1.81□□□□□ -2.12
VPS41-213ENST00000485955 NBASA2RRP1 2371 aa1.81□□□□□ -2.12
VPS41-213ENST00000485955 ANK2Q01484 3957 aa1.81□□□□□ -2.12
VPS41-213ENST00000485955 RTTNQ86VV8 2226 aa1.81□□□□□ -2.12
VPS41-213ENST00000485955 KIAA1671Q9BY89 1806 aa1.8□□□□□ -2.12
VPS41-213ENST00000485955 GREB1Q4ZG55 1949 aa1.8□□□□□ -2.12
VPS41-213ENST00000485955 TRBV19A0A075B6N1 114 aa1.8□□□□□ -2.12
VPS41-213ENST00000485955 IGHV1-69-2A0A0G2JMI3 117 aa1.8□□□□□ -2.12
VPS41-213ENST00000485955 A0A0X1KG70 313 aa1.8□□□□□ -2.12
VPS41-213ENST00000485955 PVALEFA0A1B0GWK0 134 aa1.8□□□□□ -2.12
VPS41-213ENST00000485955 C7orf66A4D0T2 115 aa1.8□□□□□ -2.12
VPS41-213ENST00000485955 RIIAD1A6NNX1 92 aa1.8□□□□□ -2.12
VPS41-213ENST00000485955 KRBOX1C9JBD0 128 aa1.8□□□□□ -2.12
VPS41-213ENST00000485955 M0R381 172 aa1.8□□□□□ -2.12
VPS41-213ENST00000485955 DNASE2O00115 360 aaPredicted RBP1.8□□□□□ -2.12
VPS41-213ENST00000485955 LGALS9O00182 355 aa1.8□□□□□ -2.12
VPS41-213ENST00000485955 TP53I11O14683 189 aa1.8□□□□□ -2.12
VPS41-213ENST00000485955 SLC22A1O15245 554 aa1.8□□□□□ -2.12
VPS41-213ENST00000485955 PIAS1O75925 651 aa1.8□□□□□ -2.12
VPS41-213ENST00000485955 APOMO95445 188 aa1.8□□□□□ -2.12
VPS41-213ENST00000485955 IFNA7P01567 189 aa1.8□□□□□ -2.12
VPS41-213ENST00000485955 ADRA2AP08913 450 aa1.8□□□□□ -2.12
VPS41-213ENST00000485955 ZNF806P0C7X5 589 aa1.8□□□□□ -2.12
VPS41-213ENST00000485955 SCGB1C2P0DMR2 95 aa1.8□□□□□ -2.12
VPS41-213ENST00000485955 RPS4Y1P22090 263 aaKnown RBP1.8□□□□□ -2.12
VPS41-213ENST00000485955 OR10J1P30954 320 aa1.8□□□□□ -2.12
VPS41-213ENST00000485955 ATP5G3P48201 142 aa1.8□□□□□ -2.12
VPS41-213ENST00000485955 INPP1P49441 399 aa1.8□□□□□ -2.12
VPS41-213ENST00000485955 PSMB3P49720 205 aa1.8□□□□□ -2.12
VPS41-213ENST00000485955 DEFA3P59666 94 aa1.8□□□□□ -2.12
VPS41-213ENST00000485955 KRTAP12-3P60328 96 aa1.8□□□□□ -2.12
VPS41-213ENST00000485955 PPP1CAP62136 330 aa1.8□□□□□ -2.12
VPS41-213ENST00000485955 NCS1P62166 190 aa1.8□□□□□ -2.12
VPS41-213ENST00000485955 RAP1AP62834 184 aa1.8□□□□□ -2.12
VPS41-213ENST00000485955 HERVK_113P63121 156 aa1.8□□□□□ -2.12
VPS41-213ENST00000485955 PSG9Q00887 426 aa1.8□□□□□ -2.12
VPS41-213ENST00000485955 PLCXD2Q0VAA5 305 aa1.8□□□□□ -2.12
VPS41-213ENST00000485955 FABP9Q0Z7S8 132 aa1.8□□□□□ -2.12
VPS41-213ENST00000485955 HTR4Q13639 388 aa1.8□□□□□ -2.12
VPS41-213ENST00000485955 MMDQ15546 238 aa1.8□□□□□ -2.12
VPS41-213ENST00000485955 CST6Q15828 149 aa1.8□□□□□ -2.12
VPS41-213ENST00000485955 NEDD8Q15843 81 aa1.8□□□□□ -2.12
VPS41-213ENST00000485955 TAF9Q16594 264 aa1.8□□□□□ -2.12
VPS41-213ENST00000485955 TNFAIP8L3Q5GJ75 292 aa1.8□□□□□ -2.12
VPS41-213ENST00000485955 PRSS54Q6PEW0 395 aa1.8□□□□□ -2.12
VPS41-213ENST00000485955 EXOC3-AS1Q8N2X6 119 aa1.8□□□□□ -2.12
VPS41-213ENST00000485955 KRTCAP2Q8N6L1 136 aa1.8□□□□□ -2.12
VPS41-213ENST00000485955 OR5A1Q8NGJ0 315 aa1.8□□□□□ -2.12
VPS41-213ENST00000485955 OR13C8Q8NGS7 320 aa1.8□□□□□ -2.12
VPS41-213ENST00000485955 SCGB1C1Q8TD33 95 aa1.8□□□□□ -2.12
VPS41-213ENST00000485955 ACOT12Q8WYK0 555 aa1.8□□□□□ -2.12
VPS41-213ENST00000485955 SLC7A6Q92536 515 aa1.8□□□□□ -2.12
VPS41-213ENST00000485955 ADAT3Q96EY9 351 aaPredicted RBP1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms