RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 NPCDR1Q9BY65 106 aa12.1□□□□□ -0.47
APOE-205ENST00000485628 ARL6Q9H0F7 186 aa12.1□□□□□ -0.47
APOE-205ENST00000485628 SMCO3A2RU48 225 aa12.09□□□□□ -0.47
APOE-205ENST00000485628 JTBO76095 146 aa12.09□□□□□ -0.47
APOE-205ENST00000485628 RD3LP0DJH9 198 aa12.09□□□□□ -0.47
APOE-205ENST00000485628 FGF7P21781 194 aa12.09□□□□□ -0.47
APOE-205ENST00000485628 SELENOTP62341 195 aa12.09□□□□□ -0.47
APOE-205ENST00000485628 TOMM20LQ6UXN7 152 aa12.09□□□□□ -0.47
APOE-205ENST00000485628 UNQ9165/PRO28630Q6UXU0 137 aa12.09□□□□□ -0.47
APOE-205ENST00000485628 DLX4Q92988 240 aaPredicted RBP12.09□□□□□ -0.47
APOE-205ENST00000485628 GINS3Q9BRX5 216 aa12.09□□□□□ -0.47
APOE-205ENST00000485628 A8MWP6 167 aa12.08□□□□□ -0.48
APOE-205ENST00000485628 IFNA5P01569 189 aa12.08□□□□□ -0.48
APOE-205ENST00000485628 GATA2P23769 480 aaPredicted RBP12.08□□□□□ -0.48
APOE-205ENST00000485628 CAMLGP49069 296 aa12.08□□□□□ -0.48
APOE-205ENST00000485628 SLURP1P55000 103 aa12.08□□□□□ -0.48
APOE-205ENST00000485628 RPEL1Q2QD12 228 aa12.08□□□□□ -0.48
APOE-205ENST00000485628 IL34Q6ZMJ4 242 aa12.08□□□□□ -0.48
APOE-205ENST00000485628 C1QL4Q86Z23 238 aa12.08□□□□□ -0.48
APOE-205ENST00000485628 LINC00482Q8N8I6 264 aa12.08□□□□□ -0.48
APOE-205ENST00000485628 OR4F17Q8NGA8 305 aa12.08□□□□□ -0.48
APOE-205ENST00000485628 STOML3Q8TAV4 291 aa12.08□□□□□ -0.48
APOE-205ENST00000485628 TMEM190Q8WZ59 177 aa12.08□□□□□ -0.48
APOE-205ENST00000485628 DPF1Q92782 380 aa12.08□□□□□ -0.48
APOE-205ENST00000485628 RCC1LQ96I51 464 aaKnown RBP12.08□□□□□ -0.48
APOE-205ENST00000485628 OR4F4Q96R69 305 aa12.08□□□□□ -0.48
APOE-205ENST00000485628 TIMM9Q9Y5J7 89 aa12.08□□□□□ -0.48
APOE-205ENST00000485628 PUS1Q9Y606 427 aaKnown RBP eCLIP12.08□□□□□ -0.48
APOE-205ENST00000485628 IGHV3-35A0A0C4DH35 117 aa12.07□□□□□ -0.48
APOE-205ENST00000485628 K7EMT4 169 aa12.07□□□□□ -0.48
APOE-205ENST00000485628 SCGB2A1O75556 95 aa12.07□□□□□ -0.48
APOE-205ENST00000485628 CFDP00746 253 aaPredicted RBP12.07□□□□□ -0.48
APOE-205ENST00000485628 STPG3Q8N7X2 389 aa12.07□□□□□ -0.48
APOE-205ENST00000485628 WFDC9Q8NEX5 89 aa12.07□□□□□ -0.48
APOE-205ENST00000485628 OR51G1Q8NGK1 321 aa12.07□□□□□ -0.48
APOE-205ENST00000485628 SPATA3Q8NHX4 192 aa12.07□□□□□ -0.48
APOE-205ENST00000485628 Q8WTZ3 238 aa12.07□□□□□ -0.48
APOE-205ENST00000485628 RSG1Q9BU20 258 aa12.07□□□□□ -0.48
APOE-205ENST00000485628 MRPL27Q9P0M9 148 aaKnown RBP12.07□□□□□ -0.48
APOE-205ENST00000485628 RFNGQ9Y644 331 aa12.07□□□□□ -0.48
APOE-205ENST00000485628 U3KQE9 123 aa12.07□□□□□ -0.48
APOE-205ENST00000485628 BORCS7-ASMTA0A0B4J1R7 106 aa12.06□□□□□ -0.48
APOE-205ENST00000485628 KANTRA0A1W2PQU2 76 aa12.06□□□□□ -0.48
APOE-205ENST00000485628 YIF1AO95070 293 aa12.06□□□□□ -0.48
APOE-205ENST00000485628 FABP1P07148 127 aa12.06□□□□□ -0.48
APOE-205ENST00000485628 C8orf88P0DMB2 117 aa12.06□□□□□ -0.48
APOE-205ENST00000485628 ATP6V0CP27449 155 aa12.06□□□□□ -0.48
APOE-205ENST00000485628 ELLP55199 621 aaPredicted RBP12.06□□□□□ -0.48
APOE-205ENST00000485628 RAB31Q13636 194 aa12.06□□□□□ -0.48
APOE-205ENST00000485628 USF2Q15853 346 aaPredicted RBP12.06□□□□□ -0.48
APOE-205ENST00000485628 FAM106AQ4KMX7 169 aa12.06□□□□□ -0.48
APOE-205ENST00000485628 MIC13Q5XKP0 118 aa12.06□□□□□ -0.48
APOE-205ENST00000485628 PATE2Q6UY27 113 aa12.06□□□□□ -0.48
APOE-205ENST00000485628 ADAMTSL5Q6ZMM2 481 aa12.06□□□□□ -0.48
APOE-205ENST00000485628 BPIFCQ8NFQ6 507 aa12.06□□□□□ -0.48
APOE-205ENST00000485628 OR2G3Q8NGZ4 309 aa12.06□□□□□ -0.48
APOE-205ENST00000485628 PSMG3Q9BT73 122 aaPredicted RBP12.06□□□□□ -0.48
APOE-205ENST00000485628 TMEM213A2RRL7 107 aa12.05□□□□□ -0.48
APOE-205ENST00000485628 TSPAN15O95858 294 aa12.05□□□□□ -0.48
APOE-205ENST00000485628 SPP1P10451 314 aa12.05□□□□□ -0.48
APOE-205ENST00000485628 CRYBB3P26998 211 aa12.05□□□□□ -0.48
APOE-205ENST00000485628 SYNJ2BPP57105 145 aa12.05□□□□□ -0.48
APOE-205ENST00000485628 PXDC1Q5TGL8 231 aa12.05□□□□□ -0.48
APOE-205ENST00000485628 SCGB1C1Q8TD33 95 aa12.05□□□□□ -0.48
APOE-205ENST00000485628 RNF125Q96EQ8 232 aa12.05□□□□□ -0.48
APOE-205ENST00000485628 SLC39A9Q9NUM3 307 aa12.05□□□□□ -0.48
APOE-205ENST00000485628 SIGLEC8Q9NYZ4 499 aa12.05□□□□□ -0.48
APOE-205ENST00000485628 PLA2G2EQ9NZK7 142 aa12.05□□□□□ -0.48
APOE-205ENST00000485628 BOLA1Q9Y3E2 137 aa12.05□□□□□ -0.48
APOE-205ENST00000485628 PXMP4Q9Y6I8 212 aa12.05□□□□□ -0.48
APOE-205ENST00000485628 B2MP61769 119 aa12.04□□□□□ -0.48
APOE-205ENST00000485628 SERF2P84101 59 aa12.04□□□□□ -0.48
APOE-205ENST00000485628 SLC51BQ86UW2 128 aa12.04□□□□□ -0.48
APOE-205ENST00000485628 BAP18Q8IXM2 172 aa12.04□□□□□ -0.48
APOE-205ENST00000485628 HSD17B11Q8NBQ5 300 aa12.04□□□□□ -0.48
APOE-205ENST00000485628 TMEM37Q8WXS4 190 aa12.04□□□□□ -0.48
APOE-205ENST00000485628 GNPNAT1Q96EK6 184 aaPredicted RBP12.04□□□□□ -0.48
APOE-205ENST00000485628 C17orf112F2Z3M2 114 aa12.03□□□□□ -0.48
APOE-205ENST00000485628 M0QZ24 198 aa12.03□□□□□ -0.48
APOE-205ENST00000485628 IL4P05112 153 aa12.03□□□□□ -0.48
APOE-205ENST00000485628 CSN3P07498 182 aa12.03□□□□□ -0.48
APOE-205ENST00000485628 TM4SF20Q53R12 229 aa12.03□□□□□ -0.48
APOE-205ENST00000485628 OR9G4Q8NGQ1 327 aa12.03□□□□□ -0.48
APOE-205ENST00000485628 SH3BGRL3Q9H299 93 aa12.03□□□□□ -0.48
APOE-205ENST00000485628 VSIRQ9H7M9 311 aa12.03□□□□□ -0.48
APOE-205ENST00000485628 DAZ1Q9NQZ3 744 aaKnown RBP12.03□□□□□ -0.48
APOE-205ENST00000485628 C2orf70A6NJV1 201 aa12.02□□□□□ -0.49
APOE-205ENST00000485628 OVOL1O14753 267 aa12.02□□□□□ -0.49
APOE-205ENST00000485628 HNRNPCP07910 306 aaKnown RBP eCLIP12.02□□□□□ -0.49
APOE-205ENST00000485628 SEC11BP0C7V7 166 aa12.02□□□□□ -0.49
APOE-205ENST00000485628 ZNF471Q9BX82 626 aaPredicted RBP12.02□□□□□ -0.49
APOE-205ENST00000485628 KCNIP2Q9NS61 270 aa12.02□□□□□ -0.49
APOE-205ENST00000485628 UFC1Q9Y3C8 167 aa12.02□□□□□ -0.49
APOE-205ENST00000485628 IGHV3OR16-8A0A075B7F1 116 aa12.01□□□□□ -0.49
APOE-205ENST00000485628 ELOA3CA0A087WX78 387 aaPredicted RBP12.01□□□□□ -0.49
APOE-205ENST00000485628 APOHP02749 345 aaPredicted RBP12.01□□□□□ -0.49
APOE-205ENST00000485628 EDN2P20800 178 aa12.01□□□□□ -0.49
APOE-205ENST00000485628 C4BPBP20851 252 aa12.01□□□□□ -0.49
APOE-205ENST00000485628 EIF5AP63241 154 aaKnown RBP12.01□□□□□ -0.49
APOE-205ENST00000485628 ZNF709Q8N972 641 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms