RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 SEPSECSQ9HD40 501 aaKnown RBP11.21□□□□□ -0.62
LRIF1-202ENST00000485275 IGHV3OR16-8A0A075B7F1 116 aa11.2□□□□□ -0.62
LRIF1-202ENST00000485275 ZNF705EA8MWA4 302 aaPredicted RBP11.2□□□□□ -0.62
LRIF1-202ENST00000485275 UMAD1C9J7I0 102 aa11.2□□□□□ -0.62
LRIF1-202ENST00000485275 BMPR1BO00238 502 aa11.2□□□□□ -0.62
LRIF1-202ENST00000485275 CD28P10747 220 aa11.2□□□□□ -0.62
LRIF1-202ENST00000485275 M6PRP20645 277 aa11.2□□□□□ -0.62
LRIF1-202ENST00000485275 KRTAP10-3P60369 221 aa11.2□□□□□ -0.62
LRIF1-202ENST00000485275 YPEL3P61236 119 aaPredicted RBP11.2□□□□□ -0.62
LRIF1-202ENST00000485275 UHRF2Q96PU4 802 aa11.2□□□□□ -0.62
LRIF1-202ENST00000485275 SLC25A22Q9H936 323 aa11.2□□□□□ -0.62
LRIF1-202ENST00000485275 KCNIP2Q9NS61 270 aa11.2□□□□□ -0.62
LRIF1-202ENST00000485275 RNF114Q9Y508 228 aa11.2□□□□□ -0.62
LRIF1-202ENST00000485275 TRAV30A0A087WSZ9 112 aa11.19□□□□□ -0.62
LRIF1-202ENST00000485275 A0A0G2JLM5 398 aa11.19□□□□□ -0.62
LRIF1-202ENST00000485275 TEX46H3BTG2 121 aa11.19□□□□□ -0.62
LRIF1-202ENST00000485275 HAX1O00165 279 aa11.19□□□□□ -0.62
LRIF1-202ENST00000485275 RD3LP0DJH9 198 aa11.19□□□□□ -0.62
LRIF1-202ENST00000485275 SELENOTP62341 195 aa11.19□□□□□ -0.62
LRIF1-202ENST00000485275 USF2Q15853 346 aaPredicted RBP11.19□□□□□ -0.62
LRIF1-202ENST00000485275 CLLU1Q5K131 121 aa11.19□□□□□ -0.62
LRIF1-202ENST00000485275 PXDC1Q5TGL8 231 aa11.19□□□□□ -0.62
LRIF1-202ENST00000485275 OR10G4Q8NGN3 311 aa11.19□□□□□ -0.62
LRIF1-202ENST00000485275 OR10G9Q8NGN4 311 aa11.19□□□□□ -0.62
LRIF1-202ENST00000485275 OR10G7Q8NGN6 311 aa11.19□□□□□ -0.62
LRIF1-202ENST00000485275 OR4F5Q8NH21 305 aa11.19□□□□□ -0.62
LRIF1-202ENST00000485275 ZFAND3Q9H8U3 227 aa11.19□□□□□ -0.62
LRIF1-202ENST00000485275 CLPSL1A2RUU4 121 aa11.18□□□□□ -0.62
LRIF1-202ENST00000485275 HMGB3O15347 200 aaKnown RBP11.18□□□□□ -0.62
LRIF1-202ENST00000485275 NUPL2O15504 423 aaKnown RBP11.18□□□□□ -0.62
LRIF1-202ENST00000485275 ARL3P36405 182 aa11.18□□□□□ -0.62
LRIF1-202ENST00000485275 FAM122CQ6P4D5 195 aa11.18□□□□□ -0.62
LRIF1-202ENST00000485275 PRIMA1Q86XR5 153 aa11.18□□□□□ -0.62
LRIF1-202ENST00000485275 COMMD1Q8N668 190 aa11.18□□□□□ -0.62
LRIF1-202ENST00000485275 OR51G1Q8NGK1 321 aa11.18□□□□□ -0.62
LRIF1-202ENST00000485275 UBE2E2Q96LR5 201 aa11.18□□□□□ -0.62
LRIF1-202ENST00000485275 ATP6V0BQ99437 205 aa11.18□□□□□ -0.62
LRIF1-202ENST00000485275 PUS1Q9Y606 427 aaKnown RBP eCLIP11.18□□□□□ -0.62
LRIF1-202ENST00000485275 TENM1Q9UKZ4 2725 aa11.18□□□□□ -0.62
LRIF1-202ENST00000485275 WI2-2373I1.2A0A1W2PRP0 233 aa11.18□□□□□ -0.62
LRIF1-202ENST00000485275 SEC14L6B5MCN3 397 aa11.18□□□□□ -0.62
LRIF1-202ENST00000485275 I3L521 148 aa11.18□□□□□ -0.62
LRIF1-202ENST00000485275 OR2C1O95371 312 aa11.18□□□□□ -0.62
LRIF1-202ENST00000485275 IL4P05112 153 aa11.18□□□□□ -0.62
LRIF1-202ENST00000485275 LGALS1P09382 135 aaKnown RBP11.18□□□□□ -0.62
LRIF1-202ENST00000485275 ORM2P19652 201 aa11.18□□□□□ -0.62
LRIF1-202ENST00000485275 RAB5CP51148 216 aa11.18□□□□□ -0.62
LRIF1-202ENST00000485275 PLP1P60201 277 aa11.18□□□□□ -0.62
LRIF1-202ENST00000485275 LYZP61626 148 aa11.18□□□□□ -0.62
LRIF1-202ENST00000485275 DEFB136Q30KP8 78 aa11.18□□□□□ -0.62
LRIF1-202ENST00000485275 ACOT6Q3I5F7 207 aaPredicted RBP11.18□□□□□ -0.62
LRIF1-202ENST00000485275 SPSB3Q6PJ21 355 aa11.18□□□□□ -0.62
LRIF1-202ENST00000485275 OR1B1Q8NGR6 318 aa11.18□□□□□ -0.62
LRIF1-202ENST00000485275 RNF125Q96EQ8 232 aa11.18□□□□□ -0.62
LRIF1-202ENST00000485275 FBN1P35555 2871 aaKnown RBP11.17□□□□□ -0.62
LRIF1-202ENST00000485275 A0A1B0GV50 99 aa11.17□□□□□ -0.62
LRIF1-202ENST00000485275 OR5G3P0C626 314 aa11.17□□□□□ -0.62
LRIF1-202ENST00000485275 TOMM20LQ6UXN7 152 aa11.17□□□□□ -0.62
LRIF1-202ENST00000485275 UNQ9165/PRO28630Q6UXU0 137 aa11.17□□□□□ -0.62
LRIF1-202ENST00000485275 MIR17HGQ75NE6 70 aa11.17□□□□□ -0.62
LRIF1-202ENST00000485275 RAB24Q969Q5 203 aa11.17□□□□□ -0.62
LRIF1-202ENST00000485275 PBDC1Q9BVG4 233 aa11.17□□□□□ -0.62
LRIF1-202ENST00000485275 IGHV4OR15-8A0A075B7B6 117 aa11.16□□□□□ -0.62
LRIF1-202ENST00000485275 A0A087WW49 117 aa11.16□□□□□ -0.62
LRIF1-202ENST00000485275 MBP02144 154 aa11.16□□□□□ -0.62
LRIF1-202ENST00000485275 CDC34P49427 236 aaPredicted RBP11.16□□□□□ -0.62
LRIF1-202ENST00000485275 FGF8P55075 233 aaPredicted RBP11.16□□□□□ -0.62
LRIF1-202ENST00000485275 DPPA3Q6W0C5 159 aa11.16□□□□□ -0.62
LRIF1-202ENST00000485275 ZNF600Q6ZNG1 722 aa11.16□□□□□ -0.62
LRIF1-202ENST00000485275 LYPD6BQ8NI32 183 aa11.16□□□□□ -0.62
LRIF1-202ENST00000485275 SAT2Q96F10 170 aaPredicted RBP11.16□□□□□ -0.62
LRIF1-202ENST00000485275 CITED2Q99967 270 aaPredicted RBP11.16□□□□□ -0.62
LRIF1-202ENST00000485275 GAR1Q9NY12 217 aaKnown RBP11.16□□□□□ -0.62
LRIF1-202ENST00000485275 MRPL27Q9P0M9 148 aaKnown RBP11.16□□□□□ -0.62
LRIF1-202ENST00000485275 PEF1Q9UBV8 284 aaKnown RBP11.16□□□□□ -0.62
LRIF1-202ENST00000485275 TRAV5A0A0B4J249 113 aa11.16□□□□□ -0.62
LRIF1-202ENST00000485275 COX7A2P2O60397 106 aa11.16□□□□□ -0.62
LRIF1-202ENST00000485275 CDX1P47902 265 aaPredicted RBP11.16□□□□□ -0.62
LRIF1-202ENST00000485275 CCL20P78556 96 aa11.16□□□□□ -0.62
LRIF1-202ENST00000485275 KHDC1LQ5JSQ8 128 aa11.16□□□□□ -0.62
LRIF1-202ENST00000485275 FAM78BQ5VT40 261 aa11.16□□□□□ -0.62
LRIF1-202ENST00000485275 LCN15Q6UWW0 184 aa11.16□□□□□ -0.62
LRIF1-202ENST00000485275 CTXND1A0A1B0GTU2 59 aa11.15□□□□□ -0.62
LRIF1-202ENST00000485275 KRTAP24-1Q3LI83 254 aa11.15□□□□□ -0.62
LRIF1-202ENST00000485275 LEMD1Q68G75 181 aa11.15□□□□□ -0.62
LRIF1-202ENST00000485275 LINC00305Q7Z4B0 112 aa11.15□□□□□ -0.62
LRIF1-202ENST00000485275 Q8WTZ3 238 aa11.15□□□□□ -0.62
LRIF1-202ENST00000485275 ZNF503Q96F45 646 aa11.15□□□□□ -0.62
LRIF1-202ENST00000485275 DUX3Q96PT4 197 aa11.15□□□□□ -0.62
LRIF1-202ENST00000485275 SCRT1Q9BWW7 348 aa11.15□□□□□ -0.62
LRIF1-202ENST00000485275 HRH4Q9H3N8 390 aa11.15□□□□□ -0.62
LRIF1-202ENST00000485275 DNAJC4Q9NNZ3 241 aa11.15□□□□□ -0.62
LRIF1-202ENST00000485275 FUT9Q9Y231 359 aa11.15□□□□□ -0.62
LRIF1-202ENST00000485275 ATRQ13535 2644 aa11.14□□□□□ -0.63
LRIF1-202ENST00000485275 MAP1LC3B2A6NCE7 125 aa11.14□□□□□ -0.63
LRIF1-202ENST00000485275 ADARB2-AS1A8MUL3 147 aa11.14□□□□□ -0.63
LRIF1-202ENST00000485275 HYPMO75409 117 aa11.14□□□□□ -0.63
LRIF1-202ENST00000485275 H2AFB1P0C5Y9 115 aa11.14□□□□□ -0.63
LRIF1-202ENST00000485275 EDN2P20800 178 aa11.14□□□□□ -0.63
LRIF1-202ENST00000485275 C10orf113Q5VZT2 155 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms