RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 FAM209BQ5JX69 171 aa15.83■□□□□ 0.12
VCPKMT-203ENST00000484763 CLLU1Q5K131 121 aa15.83■□□□□ 0.12
VCPKMT-203ENST00000484763 SAT2Q96F10 170 aaPredicted RBP15.83■□□□□ 0.12
VCPKMT-203ENST00000484763 UBE2E2Q96LR5 201 aa15.82■□□□□ 0.12
VCPKMT-203ENST00000484763 GNB4Q9HAV0 340 aa15.82■□□□□ 0.12
VCPKMT-203ENST00000484763 BLOC1S1P78537 153 aa15.82■□□□□ 0.12
VCPKMT-203ENST00000484763 RPP25LQ8N5L8 163 aaKnown RBP15.82■□□□□ 0.12
VCPKMT-203ENST00000484763 OR51G1Q8NGK1 321 aa15.82■□□□□ 0.12
VCPKMT-203ENST00000484763 PPP5D1E7EU14 171 aa15.81■□□□□ 0.12
VCPKMT-203ENST00000484763 ARL3P36405 182 aa15.81■□□□□ 0.12
VCPKMT-203ENST00000484763 PXDC1Q5TGL8 231 aa15.81■□□□□ 0.12
VCPKMT-203ENST00000484763 OR1L4Q8NGR5 311 aa15.81■□□□□ 0.12
VCPKMT-203ENST00000484763 Q8WTZ3 238 aa15.81■□□□□ 0.12
VCPKMT-203ENST00000484763 PFDN5Q99471 154 aa15.81■□□□□ 0.12
VCPKMT-203ENST00000484763 C19orf24Q9BVV8 132 aa15.81■□□□□ 0.12
VCPKMT-203ENST00000484763 RNF114Q9Y508 228 aa15.81■□□□□ 0.12
VCPKMT-203ENST00000484763 NIPBLQ6KC79 2804 aaeCLIP15.81■□□□□ 0.12
VCPKMT-203ENST00000484763 CLPSL1A2RUU4 121 aa15.8■□□□□ 0.12
VCPKMT-203ENST00000484763 COX7A2P2O60397 106 aa15.8■□□□□ 0.12
VCPKMT-203ENST00000484763 PLP1P60201 277 aa15.8■□□□□ 0.12
VCPKMT-203ENST00000484763 RELQ04864 619 aaPredicted RBP15.8■□□□□ 0.12
VCPKMT-203ENST00000484763 FAM122CQ6P4D5 195 aa15.8■□□□□ 0.12
VCPKMT-203ENST00000484763 ZNF600Q6ZNG1 722 aa15.8■□□□□ 0.12
VCPKMT-203ENST00000484763 RCC1LQ96I51 464 aaKnown RBP15.8■□□□□ 0.12
VCPKMT-203ENST00000484763 C2CD3Q4AC94 2353 aa15.8■□□□□ 0.12
VCPKMT-203ENST00000484763 OR2C1O95371 312 aa15.8■□□□□ 0.12
VCPKMT-203ENST00000484763 TRBV12-3P01733 135 aa15.8■□□□□ 0.12
VCPKMT-203ENST00000484763 CDC34P49427 236 aaPredicted RBP15.8■□□□□ 0.12
VCPKMT-203ENST00000484763 LYZP61626 148 aa15.8■□□□□ 0.12
VCPKMT-203ENST00000484763 TCTEX1D4Q5JR98 221 aa15.8■□□□□ 0.12
VCPKMT-203ENST00000484763 GATAD1Q8WUU5 269 aa15.8■□□□□ 0.12
VCPKMT-203ENST00000484763 ACTR3CQ9C0K3 210 aaPredicted RBP15.8■□□□□ 0.12
VCPKMT-203ENST00000484763 SLC25A22Q9H936 323 aa15.8■□□□□ 0.12
VCPKMT-203ENST00000484763 DOK5Q9P104 306 aa15.8■□□□□ 0.12
VCPKMT-203ENST00000484763 ANKRD34BA5PLL1 514 aa15.79■□□□□ 0.12
VCPKMT-203ENST00000484763 SEC14L6B5MCN3 397 aa15.79■□□□□ 0.12
VCPKMT-203ENST00000484763 IL4P05112 153 aa15.79■□□□□ 0.12
VCPKMT-203ENST00000484763 LGALS1P09382 135 aaKnown RBP15.79■□□□□ 0.12
VCPKMT-203ENST00000484763 RHOBP62745 196 aa15.79■□□□□ 0.12
VCPKMT-203ENST00000484763 OR1B1Q8NGR6 318 aa15.79■□□□□ 0.12
VCPKMT-203ENST00000484763 RNF125Q96EQ8 232 aa15.79■□□□□ 0.12
VCPKMT-203ENST00000484763 OR5B12Q96R08 314 aa15.79■□□□□ 0.12
VCPKMT-203ENST00000484763 DNAJC4Q9NNZ3 241 aa15.79■□□□□ 0.12
VCPKMT-203ENST00000484763 PEF1Q9UBV8 284 aaKnown RBP15.79■□□□□ 0.12
VCPKMT-203ENST00000484763 PUS1Q9Y606 427 aaKnown RBP eCLIP15.79■□□□□ 0.12
VCPKMT-203ENST00000484763 ELOA3CA0A087WX78 387 aaPredicted RBP15.78■□□□□ 0.12
VCPKMT-203ENST00000484763 CTXND1A0A1B0GTU2 59 aa15.78■□□□□ 0.12
VCPKMT-203ENST00000484763 A0A1W2PPV4 95 aa15.78■□□□□ 0.12
VCPKMT-203ENST00000484763 H2AFB1P0C5Y9 115 aa15.78■□□□□ 0.12
VCPKMT-203ENST00000484763 ORM2P19652 201 aa15.78■□□□□ 0.12
VCPKMT-203ENST00000484763 ZNF726P1Q15940 193 aa15.78■□□□□ 0.12
VCPKMT-203ENST00000484763 TMEM37Q8WXS4 190 aa15.78■□□□□ 0.12
VCPKMT-203ENST00000484763 RNF2Q99496 336 aa15.78■□□□□ 0.12
VCPKMT-203ENST00000484763 WI2-2373I1.2A0A1W2PRP0 233 aa15.78■□□□□ 0.12
VCPKMT-203ENST00000484763 HAX1O00165 279 aa15.78■□□□□ 0.12
VCPKMT-203ENST00000484763 HYPMO75409 117 aa15.78■□□□□ 0.12
VCPKMT-203ENST00000484763 OR5G3P0C626 314 aa15.78■□□□□ 0.12
VCPKMT-203ENST00000484763 CDX1P47902 265 aaPredicted RBP15.78■□□□□ 0.12
VCPKMT-203ENST00000484763 PROK1P58294 105 aa15.78■□□□□ 0.12
VCPKMT-203ENST00000484763 FAM78BQ5VT40 261 aa15.78■□□□□ 0.12
VCPKMT-203ENST00000484763 C10orf113Q5VZT2 155 aa15.78■□□□□ 0.12
VCPKMT-203ENST00000484763 SSX7Q7RTT5 188 aa15.78■□□□□ 0.12
VCPKMT-203ENST00000484763 PBDC1Q9BVG4 233 aa15.78■□□□□ 0.12
VCPKMT-203ENST00000484763 SEPSECSQ9HD40 501 aaKnown RBP15.78■□□□□ 0.12
VCPKMT-203ENST00000484763 IGHV3-35A0A0C4DH35 117 aa15.77■□□□□ 0.11
VCPKMT-203ENST00000484763 BMPR1BO00238 502 aa15.77■□□□□ 0.11
VCPKMT-203ENST00000484763 KHDC1LQ5JSQ8 128 aa15.77■□□□□ 0.11
VCPKMT-203ENST00000484763 PATE2Q6UY27 113 aa15.77■□□□□ 0.11
VCPKMT-203ENST00000484763 RAB24Q969Q5 203 aa15.77■□□□□ 0.11
VCPKMT-203ENST00000484763 ZNF414Q96IQ9 312 aa15.77■□□□□ 0.11
VCPKMT-203ENST00000484763 MRPL32Q9BYC8 188 aaKnown RBP15.77■□□□□ 0.11
VCPKMT-203ENST00000484763 FUT9Q9Y231 359 aa15.77■□□□□ 0.11
VCPKMT-203ENST00000484763 A0A1B0GUS0 222 aa15.76■□□□□ 0.11
VCPKMT-203ENST00000484763 GGCTO75223 188 aaKnown RBP15.76■□□□□ 0.11
VCPKMT-203ENST00000484763 HIGD1AQ9Y241 93 aa15.76■□□□□ 0.11
VCPKMT-203ENST00000484763 MAP1LC3B2A6NCE7 125 aa15.75■□□□□ 0.11
VCPKMT-203ENST00000484763 TOMM20LQ6UXN7 152 aa15.75■□□□□ 0.11
VCPKMT-203ENST00000484763 SFT2D1Q8WV19 159 aa15.75■□□□□ 0.11
VCPKMT-203ENST00000484763 MBD3L1Q8WWY6 194 aa15.75■□□□□ 0.11
VCPKMT-203ENST00000484763 WFDC12Q8WWY7 111 aa15.75■□□□□ 0.11
VCPKMT-203ENST00000484763 MAP1LC3BQ9GZQ8 125 aa15.75■□□□□ 0.11
VCPKMT-203ENST00000484763 ZFAND3Q9H8U3 227 aa15.75■□□□□ 0.11
VCPKMT-203ENST00000484763 SETD2Q9BYW2 2564 aaPredicted RBP15.75■□□□□ 0.11
VCPKMT-203ENST00000484763 CD28P10747 220 aa15.75■□□□□ 0.11
VCPKMT-203ENST00000484763 USF2Q15853 346 aaPredicted RBP15.75■□□□□ 0.11
VCPKMT-203ENST00000484763 LCN15Q6UWW0 184 aa15.75■□□□□ 0.11
VCPKMT-203ENST00000484763 LINC00305Q7Z4B0 112 aa15.75■□□□□ 0.11
VCPKMT-203ENST00000484763 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.75■□□□□ 0.11
VCPKMT-203ENST00000484763 LYPD6BQ8NI32 183 aa15.75■□□□□ 0.11
VCPKMT-203ENST00000484763 C4orf3Q8WVX3 66 aa15.75■□□□□ 0.11
VCPKMT-203ENST00000484763 UHRF2Q96PU4 802 aa15.75■□□□□ 0.11
VCPKMT-203ENST00000484763 HRH4Q9H3N8 390 aa15.75■□□□□ 0.11
VCPKMT-203ENST00000484763 MRPL27Q9P0M9 148 aaKnown RBP15.75■□□□□ 0.11
VCPKMT-203ENST00000484763 JMJD1CQ15652 2540 aa15.74■□□□□ 0.11
VCPKMT-203ENST00000484763 TEX46H3BTG2 121 aa15.74■□□□□ 0.11
VCPKMT-203ENST00000484763 I3L521 148 aa15.74■□□□□ 0.11
VCPKMT-203ENST00000484763 NDUFA4O00483 81 aa15.74■□□□□ 0.11
VCPKMT-203ENST00000484763 HBE1P02100 147 aa15.74■□□□□ 0.11
VCPKMT-203ENST00000484763 SPATA31B1PQ5VZV4 182 aa15.74■□□□□ 0.11
VCPKMT-203ENST00000484763 HMGB3O15347 200 aaKnown RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms