RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 POLR2GP62487 172 aaKnown RBP eCLIP9.06□□□□□ -0.96
MSH5-216ENST00000484309 C16orf54Q6UWD8 224 aa9.06□□□□□ -0.96
MSH5-216ENST00000484309 STPG3Q8N7X2 389 aa9.06□□□□□ -0.96
MSH5-216ENST00000484309 RNF125Q96EQ8 232 aa9.06□□□□□ -0.96
MSH5-216ENST00000484309 CIB3Q96Q77 187 aaPredicted RBP9.06□□□□□ -0.96
MSH5-216ENST00000484309 U3KQE9 123 aa9.06□□□□□ -0.96
MSH5-216ENST00000484309 K7EQG2 157 aa9.05□□□□□ -0.96
MSH5-216ENST00000484309 CCSO14618 274 aa9.05□□□□□ -0.96
MSH5-216ENST00000484309 SPRY2O43597 315 aa9.05□□□□□ -0.96
MSH5-216ENST00000484309 SSSCA1O60232 199 aa9.05□□□□□ -0.96
MSH5-216ENST00000484309 ZNF688P0C7X2 276 aa9.05□□□□□ -0.96
MSH5-216ENST00000484309 NKX2-1P43699 371 aaPredicted RBP9.05□□□□□ -0.96
MSH5-216ENST00000484309 CMC4P56277 68 aaPredicted RBP9.05□□□□□ -0.96
MSH5-216ENST00000484309 LYZP61626 148 aa9.05□□□□□ -0.96
MSH5-216ENST00000484309 OR4D5Q8NGN0 318 aa9.05□□□□□ -0.96
MSH5-216ENST00000484309 GLMPQ8WWB7 406 aa9.05□□□□□ -0.96
MSH5-216ENST00000484309 RYR3Q15413 4870 aa9.05□□□□□ -0.96
MSH5-216ENST00000484309 IGKV1OR2-108A0A075B7D4 117 aa9.04□□□□□ -0.96
MSH5-216ENST00000484309 TRAV2A0A0B4J234 112 aa9.04□□□□□ -0.96
MSH5-216ENST00000484309 KIR2DL5BA0A0G2JN68 375 aa9.04□□□□□ -0.96
MSH5-216ENST00000484309 KIR2DL5BA0A0G2JPC4 375 aa9.04□□□□□ -0.96
MSH5-216ENST00000484309 PRSS46E5RG02 174 aa9.04□□□□□ -0.96
MSH5-216ENST00000484309 CCNKO75909 580 aa9.04□□□□□ -0.96
MSH5-216ENST00000484309 TCRBP04435 133 aa9.04□□□□□ -0.96
MSH5-216ENST00000484309 RPP30P78346 268 aaKnown RBP9.04□□□□□ -0.96
MSH5-216ENST00000484309 ID3Q02535 119 aa9.04□□□□□ -0.96
MSH5-216ENST00000484309 IAH1Q2TAA2 248 aaPredicted RBP9.04□□□□□ -0.96
MSH5-216ENST00000484309 GSG1LQ6UXU4 331 aa9.04□□□□□ -0.96
MSH5-216ENST00000484309 Q6ZWC4 215 aa9.04□□□□□ -0.96
MSH5-216ENST00000484309 KIR2DL5AQ8N109 375 aa9.04□□□□□ -0.96
MSH5-216ENST00000484309 KIR2DL5BQ8NHK3 375 aa9.04□□□□□ -0.96
MSH5-216ENST00000484309 DCANP1Q8TF63 244 aa9.04□□□□□ -0.96
MSH5-216ENST00000484309 SEC22CQ9BRL7 303 aa9.04□□□□□ -0.96
MSH5-216ENST00000484309 CCDC32Q9BV29 185 aa9.04□□□□□ -0.96
MSH5-216ENST00000484309 NUDT15Q9NV35 164 aa9.04□□□□□ -0.96
MSH5-216ENST00000484309 PSENENQ9NZ42 101 aa9.04□□□□□ -0.96
MSH5-216ENST00000484309 GSKIPQ9P0R6 139 aa9.04□□□□□ -0.96
MSH5-216ENST00000484309 STRAPQ9Y3F4 350 aaKnown RBP9.04□□□□□ -0.96
MSH5-216ENST00000484309 A0A0J9YWU9 116 aa9.03□□□□□ -0.96
MSH5-216ENST00000484309 SMCO3A2RU48 225 aa9.03□□□□□ -0.96
MSH5-216ENST00000484309 HELTA6NFD8 242 aa9.03□□□□□ -0.96
MSH5-216ENST00000484309 A6NHS1 94 aa9.03□□□□□ -0.96
MSH5-216ENST00000484309 KNCNA6PVL3 124 aa9.03□□□□□ -0.96
MSH5-216ENST00000484309 UBE2CO00762 179 aa9.03□□□□□ -0.96
MSH5-216ENST00000484309 BUB3O43684 328 aa9.03□□□□□ -0.96
MSH5-216ENST00000484309 EIF2B2P49770 351 aaKnown RBP9.03□□□□□ -0.96
MSH5-216ENST00000484309 AKR1C1Q04828 323 aa9.03□□□□□ -0.96
MSH5-216ENST00000484309 OR8G2PQ6IF36 304 aa9.03□□□□□ -0.96
MSH5-216ENST00000484309 SIGLEC15Q6ZMC9 328 aa9.03□□□□□ -0.96
MSH5-216ENST00000484309 ACOT7LQ6ZUV0 252 aa9.03□□□□□ -0.96
MSH5-216ENST00000484309 ZBTB8BQ8NAP8 495 aaPredicted RBP9.03□□□□□ -0.96
MSH5-216ENST00000484309 MITD1Q8WV92 249 aa9.03□□□□□ -0.96
MSH5-216ENST00000484309 RNF183Q96D59 192 aa9.03□□□□□ -0.96
MSH5-216ENST00000484309 TRGV9Q99603 122 aa9.03□□□□□ -0.96
MSH5-216ENST00000484309 CSTL1Q9H114 145 aa9.03□□□□□ -0.96
MSH5-216ENST00000484309 FAM25EA8MYX2 175 aa9.02□□□□□ -0.97
MSH5-216ENST00000484309 CA1P00915 261 aaPredicted RBP9.02□□□□□ -0.97
MSH5-216ENST00000484309 GATA2P23769 480 aaPredicted RBP9.02□□□□□ -0.97
MSH5-216ENST00000484309 RRAS2P62070 204 aaPredicted RBP9.02□□□□□ -0.97
MSH5-216ENST00000484309 EWSR1Q01844 656 aaKnown RBP eCLIP9.02□□□□□ -0.97
MSH5-216ENST00000484309 PSMG4Q5JS54 123 aa9.02□□□□□ -0.97
MSH5-216ENST00000484309 STHQ8IWL8 128 aa9.02□□□□□ -0.97
MSH5-216ENST00000484309 THAP8Q8NA92 274 aa9.02□□□□□ -0.97
MSH5-216ENST00000484309 PPP1R14BQ96C90 147 aa9.02□□□□□ -0.97
MSH5-216ENST00000484309 TBC1D24Q9ULP9 559 aa9.02□□□□□ -0.97
MSH5-216ENST00000484309 TP53TG1Q9Y2A0 90 aa9.02□□□□□ -0.97
MSH5-216ENST00000484309 FAM240BA0A1B0GVZ2 78 aa9.01□□□□□ -0.97
MSH5-216ENST00000484309 FABP1P07148 127 aa9.01□□□□□ -0.97
MSH5-216ENST00000484309 H2AFB2P0C5Z0 115 aa9.01□□□□□ -0.97
MSH5-216ENST00000484309 METTL15P1P0C7V9 234 aa9.01□□□□□ -0.97
MSH5-216ENST00000484309 PAX9P55771 341 aa9.01□□□□□ -0.97
MSH5-216ENST00000484309 PMS2P11Q13670 270 aa9.01□□□□□ -0.97
MSH5-216ENST00000484309 ACTL10Q5JWF8 245 aa9.01□□□□□ -0.97
MSH5-216ENST00000484309 TMEM182Q6ZP80 229 aaPredicted RBP9.01□□□□□ -0.97
MSH5-216ENST00000484309 S100ZQ8WXG8 99 aa9.01□□□□□ -0.97
MSH5-216ENST00000484309 NRN1Q9NPD7 142 aa9.01□□□□□ -0.97
MSH5-216ENST00000484309 RCL1Q9Y2P8 373 aaKnown RBP9.01□□□□□ -0.97
MSH5-216ENST00000484309 PMS2P5A8MQ11 134 aa9□□□□□ -0.97
MSH5-216ENST00000484309 SNRPGP15A8MWD9 76 aa9□□□□□ -0.97
MSH5-216ENST00000484309 AP2S1P53680 142 aaPredicted RBP9□□□□□ -0.97
MSH5-216ENST00000484309 IL17DQ8TAD2 202 aa9□□□□□ -0.97
MSH5-216ENST00000484309 ZNF431Q8TF32 576 aaPredicted RBP9□□□□□ -0.97
MSH5-216ENST00000484309 SMIM8Q96KF7 97 aa9□□□□□ -0.97
MSH5-216ENST00000484309 PTTG2Q9NZH5 202 aa9□□□□□ -0.97
MSH5-216ENST00000484309 LSM5Q9Y4Y9 91 aaKnown RBP9□□□□□ -0.97
MSH5-216ENST00000484309 LYSTQ99698 3801 aa9□□□□□ -0.97
MSH5-216ENST00000484309 C5orf51A6NDU8 294 aa8.99□□□□□ -0.97
MSH5-216ENST00000484309 MBPP02686 304 aaPredicted RBP8.99□□□□□ -0.97
MSH5-216ENST00000484309 C4BPBP20851 252 aa8.99□□□□□ -0.97
MSH5-216ENST00000484309 NUP62P37198 522 aaPredicted RBP8.99□□□□□ -0.97
MSH5-216ENST00000484309 DEFB1P60022 68 aa8.99□□□□□ -0.97
MSH5-216ENST00000484309 ASAH1Q13510 395 aa8.99□□□□□ -0.97
MSH5-216ENST00000484309 ZNF846Q147U1 533 aa8.99□□□□□ -0.97
MSH5-216ENST00000484309 MZT2BQ6NZ67 158 aa8.99□□□□□ -0.97
MSH5-216ENST00000484309 TMEM14EPQ6UXP3 125 aa8.99□□□□□ -0.97
MSH5-216ENST00000484309 LINC00299Q6ZSB3 139 aa8.99□□□□□ -0.97
MSH5-216ENST00000484309 TRPT1Q86TN4 253 aaKnown RBP8.99□□□□□ -0.97
MSH5-216ENST00000484309 C12orf45Q8N5I9 185 aaPredicted RBP8.99□□□□□ -0.97
MSH5-216ENST00000484309 BPIFCQ8NFQ6 507 aa8.99□□□□□ -0.97
MSH5-216ENST00000484309 RARRES2Q99969 163 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms