RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 TMEM116Q8NCL8 245 aa6.73□□□□□ -1.33
COL8A1-207ENST00000483969 OR4D5Q8NGN0 318 aa6.73□□□□□ -1.33
COL8A1-207ENST00000483969 OR1S2Q8NGQ3 325 aa6.73□□□□□ -1.33
COL8A1-207ENST00000483969 TMEM170AQ8WVE7 144 aa6.73□□□□□ -1.33
COL8A1-207ENST00000483969 NPIPB3Q92617 1050 aa6.73□□□□□ -1.33
COL8A1-207ENST00000483969 SMIM8Q96KF7 97 aa6.73□□□□□ -1.33
COL8A1-207ENST00000483969 OR10C1Q96KK4 312 aa6.73□□□□□ -1.33
COL8A1-207ENST00000483969 C2orf50Q96LR7 162 aa6.73□□□□□ -1.33
COL8A1-207ENST00000483969 RAB40CQ96S21 281 aa6.73□□□□□ -1.33
COL8A1-207ENST00000483969 MARVELD1Q9BSK0 173 aa6.73□□□□□ -1.33
COL8A1-207ENST00000483969 PSENENQ9NZ42 101 aa6.73□□□□□ -1.33
COL8A1-207ENST00000483969 STRAPQ9Y3F4 350 aaKnown RBP6.73□□□□□ -1.33
COL8A1-207ENST00000483969 MGAM2Q2M2H8 2515 aa6.73□□□□□ -1.33
COL8A1-207ENST00000483969 PKD1L1Q8TDX9 2849 aa6.72□□□□□ -1.33
COL8A1-207ENST00000483969 VWFP04275 2813 aa6.72□□□□□ -1.33
COL8A1-207ENST00000483969 SCGB1D2O95969 90 aa6.72□□□□□ -1.33
COL8A1-207ENST00000483969 FABP1P07148 127 aa6.72□□□□□ -1.33
COL8A1-207ENST00000483969 NPPCP23582 126 aa6.72□□□□□ -1.33
COL8A1-207ENST00000483969 OR10J1P30954 320 aa6.72□□□□□ -1.33
COL8A1-207ENST00000483969 RND2P52198 227 aa6.72□□□□□ -1.33
COL8A1-207ENST00000483969 TAS2R30P59541 319 aa6.72□□□□□ -1.33
COL8A1-207ENST00000483969 YPEL3P61236 119 aaPredicted RBP6.72□□□□□ -1.33
COL8A1-207ENST00000483969 CD300EQ496F6 205 aaPredicted RBP6.72□□□□□ -1.33
COL8A1-207ENST00000483969 TOMM20LQ6UXN7 152 aa6.72□□□□□ -1.33
COL8A1-207ENST00000483969 SLC16A13Q7RTY0 426 aa6.72□□□□□ -1.33
COL8A1-207ENST00000483969 GTSCR1Q86UQ5 136 aa6.72□□□□□ -1.33
COL8A1-207ENST00000483969 ACY3Q96HD9 319 aa6.72□□□□□ -1.33
COL8A1-207ENST00000483969 SLC35E1Q96K37 410 aa6.72□□□□□ -1.33
COL8A1-207ENST00000483969 SMPXQ9UHP9 88 aa6.72□□□□□ -1.33
COL8A1-207ENST00000483969 LSM4Q9Y4Z0 139 aaKnown RBP6.72□□□□□ -1.33
COL8A1-207ENST00000483969 PUS1Q9Y606 427 aaKnown RBP eCLIP6.72□□□□□ -1.33
COL8A1-207ENST00000483969 SMAD5-AS1Q9Y6J3 95 aa6.72□□□□□ -1.33
COL8A1-207ENST00000483969 IGHV7-4-1A0A0J9YVY3 117 aa6.71□□□□□ -1.34
COL8A1-207ENST00000483969 A0A1W2PS18 150 aa6.71□□□□□ -1.34
COL8A1-207ENST00000483969 GAGE12BA1L429 117 aa6.71□□□□□ -1.34
COL8A1-207ENST00000483969 GAGE12HA6NDE8 117 aa6.71□□□□□ -1.34
COL8A1-207ENST00000483969 ZNF785A8K8V0 405 aa6.71□□□□□ -1.34
COL8A1-207ENST00000483969 L7N2F9 121 aa6.71□□□□□ -1.34
COL8A1-207ENST00000483969 CCSO14618 274 aa6.71□□□□□ -1.34
COL8A1-207ENST00000483969 ZNF207O43670 478 aaKnown RBP6.71□□□□□ -1.34
COL8A1-207ENST00000483969 CD5P06127 495 aa6.71□□□□□ -1.34
COL8A1-207ENST00000483969 RD3LP0DJH9 198 aa6.71□□□□□ -1.34
COL8A1-207ENST00000483969 PVALBP20472 110 aaPredicted RBP6.71□□□□□ -1.34
COL8A1-207ENST00000483969 VAMP2P63027 116 aa6.71□□□□□ -1.34
COL8A1-207ENST00000483969 GUCA2BQ16661 112 aa6.71□□□□□ -1.34
COL8A1-207ENST00000483969 TIGITQ495A1 244 aa6.71□□□□□ -1.34
COL8A1-207ENST00000483969 C11orf87Q6NUJ2 197 aa6.71□□□□□ -1.34
COL8A1-207ENST00000483969 BTNL8Q6UX41 500 aa6.71□□□□□ -1.34
COL8A1-207ENST00000483969 NARS2Q96I59 477 aaKnown RBP6.71□□□□□ -1.34
COL8A1-207ENST00000483969 RHPN1-AS1Q9BWJ2 59 aa6.71□□□□□ -1.34
COL8A1-207ENST00000483969 TMEM231Q9H6L2 316 aa6.71□□□□□ -1.34
COL8A1-207ENST00000483969 MRPL36Q9P0J6 103 aaKnown RBP6.71□□□□□ -1.34
COL8A1-207ENST00000483969 MLXQ9UH92 298 aa6.71□□□□□ -1.34
COL8A1-207ENST00000483969 IGHV3OR16-8A0A075B7F1 116 aa6.7□□□□□ -1.34
COL8A1-207ENST00000483969 IZUMO1RA6ND01 250 aa6.7□□□□□ -1.34
COL8A1-207ENST00000483969 ZFP92A6NM28 416 aa6.7□□□□□ -1.34
COL8A1-207ENST00000483969 SSSCA1O60232 199 aa6.7□□□□□ -1.34
COL8A1-207ENST00000483969 TSC22D2O75157 780 aa6.7□□□□□ -1.34
COL8A1-207ENST00000483969 IGKV1-17P01599 117 aa6.7□□□□□ -1.34
COL8A1-207ENST00000483969 MBPP02686 304 aaPredicted RBP6.7□□□□□ -1.34
COL8A1-207ENST00000483969 IGLC1P0CG04 106 aa6.7□□□□□ -1.34
COL8A1-207ENST00000483969 EDN2P20800 178 aa6.7□□□□□ -1.34
COL8A1-207ENST00000483969 PAFAH1B2P68402 229 aa6.7□□□□□ -1.34
COL8A1-207ENST00000483969 CYCSP99999 105 aaKnown RBP6.7□□□□□ -1.34
COL8A1-207ENST00000483969 GAMTQ14353 236 aa6.7□□□□□ -1.34
COL8A1-207ENST00000483969 GRAMD2BQ96HH9 432 aa6.7□□□□□ -1.34
COL8A1-207ENST00000483969 CLUHP3Q96NS8 147 aa6.7□□□□□ -1.34
COL8A1-207ENST00000483969 METTL26Q96S19 204 aa6.7□□□□□ -1.34
COL8A1-207ENST00000483969 NBEAL1Q6ZS30 2694 aa6.69□□□□□ -1.34
COL8A1-207ENST00000483969 H3BP45 60 aa6.69□□□□□ -1.34
COL8A1-207ENST00000483969 CHEK1O14757 476 aa6.69□□□□□ -1.34
COL8A1-207ENST00000483969 TSPAN4O14817 238 aa6.69□□□□□ -1.34
COL8A1-207ENST00000483969 PLXNB1O43157 2135 aa6.69□□□□□ -1.34
COL8A1-207ENST00000483969 SSNA1O43805 119 aa6.69□□□□□ -1.34
COL8A1-207ENST00000483969 PTTG1O95997 202 aa6.69□□□□□ -1.34
COL8A1-207ENST00000483969 TOMM40O96008 361 aa6.69□□□□□ -1.34
COL8A1-207ENST00000483969 CFDP00746 253 aaPredicted RBP6.69□□□□□ -1.34
COL8A1-207ENST00000483969 RLN2P04090 185 aa6.69□□□□□ -1.34
COL8A1-207ENST00000483969 NHLRC4P0CG21 123 aaPredicted RBP6.69□□□□□ -1.34
COL8A1-207ENST00000483969 BCAP31P51572 246 aa6.69□□□□□ -1.34
COL8A1-207ENST00000483969 PAX9P55771 341 aa6.69□□□□□ -1.34
COL8A1-207ENST00000483969 CMC4P56277 68 aaPredicted RBP6.69□□□□□ -1.34
COL8A1-207ENST00000483969 TMEM61Q8N0U2 210 aa6.69□□□□□ -1.34
COL8A1-207ENST00000483969 OR10P1Q8NGE3 313 aa6.69□□□□□ -1.34
COL8A1-207ENST00000483969 NTN5Q8WTR8 489 aaPredicted RBP6.69□□□□□ -1.34
COL8A1-207ENST00000483969 SPAG8Q99932 426 aaPredicted RBP6.69□□□□□ -1.34
COL8A1-207ENST00000483969 B9D2Q9BPU9 175 aa6.69□□□□□ -1.34
COL8A1-207ENST00000483969 NEURL2Q9BR09 285 aa6.69□□□□□ -1.34
COL8A1-207ENST00000483969 TUBA4BQ9H853 241 aa6.69□□□□□ -1.34
COL8A1-207ENST00000483969 RCL1Q9Y2P8 373 aaKnown RBP6.69□□□□□ -1.34
COL8A1-207ENST00000483969 LSM5Q9Y4Y9 91 aaKnown RBP6.69□□□□□ -1.34
COL8A1-207ENST00000483969 MEGF8Q7Z7M0 2845 aa6.68□□□□□ -1.34
COL8A1-207ENST00000483969 IGHV3-49A0A0A0MS15 119 aa6.68□□□□□ -1.34
COL8A1-207ENST00000483969 C7orf66A4D0T2 115 aa6.68□□□□□ -1.34
COL8A1-207ENST00000483969 OR4C46A6NHA9 309 aa6.68□□□□□ -1.34
COL8A1-207ENST00000483969 A8MZ25 164 aa6.68□□□□□ -1.34
COL8A1-207ENST00000483969 K7EPK0 472 aa6.68□□□□□ -1.34
COL8A1-207ENST00000483969 GOSR2O14653 212 aa6.68□□□□□ -1.34
COL8A1-207ENST00000483969 HNRNPCP07910 306 aaKnown RBP eCLIP6.68□□□□□ -1.34
COL8A1-207ENST00000483969 PSG1P11464 419 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms