RNA–Protein interactions for RNA: ENST00000483882.1

NR1H3-222, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-222	ENST00000483882	LGALS9	O00182	355 aa		11.3	□□□□□ -0.6
NR1H3-222	ENST00000483882	GNG7	O60262	68 aa		11.3	□□□□□ -0.6
NR1H3-222	ENST00000483882	CSN3	P07498	182 aa		11.3	□□□□□ -0.6
NR1H3-222	ENST00000483882	GP9	P14770	177 aa		11.3	□□□□□ -0.6
NR1H3-222	ENST00000483882	AP2S1	P53680	142 aa	Predicted RBP	11.3	□□□□□ -0.6
NR1H3-222	ENST00000483882	TIGIT	Q495A1	244 aa		11.3	□□□□□ -0.6
NR1H3-222	ENST00000483882	OR8G2P	Q6IF36	304 aa		11.3	□□□□□ -0.6
NR1H3-222	ENST00000483882	ETFRF1	Q6IPR1	90 aa		11.3	□□□□□ -0.6
NR1H3-222	ENST00000483882	OR9G4	Q8NGQ1	327 aa		11.3	□□□□□ -0.6
NR1H3-222	ENST00000483882	ACY3	Q96HD9	319 aa		11.3	□□□□□ -0.6
NR1H3-222	ENST00000483882	LYRM2	Q9NU23	88 aa	Predicted RBP	11.3	□□□□□ -0.6
NR1H3-222	ENST00000483882	UBQLN2	Q9UHD9	624 aa		11.3	□□□□□ -0.6
NR1H3-222	ENST00000483882	IGHV3OR16-8	A0A075B7F1	116 aa		11.29	□□□□□ -0.6
NR1H3-222	ENST00000483882		E5RGE8	158 aa		11.29	□□□□□ -0.6
NR1H3-222	ENST00000483882	CST7	O76096	145 aa		11.29	□□□□□ -0.6
NR1H3-222	ENST00000483882	CFD	P00746	253 aa	Predicted RBP	11.29	□□□□□ -0.6
NR1H3-222	ENST00000483882	MUC7	Q8TAX7	377 aa		11.29	□□□□□ -0.6
NR1H3-222	ENST00000483882	ARPC5L	Q9BPX5	153 aa		11.29	□□□□□ -0.6
NR1H3-222	ENST00000483882	GAR1	Q9NY12	217 aa	Known RBP	11.29	□□□□□ -0.6
NR1H3-222	ENST00000483882	TMEM213	A2RRL7	107 aa		11.28	□□□□□ -0.6
NR1H3-222	ENST00000483882	NDUFA4	O00483	81 aa		11.28	□□□□□ -0.6
NR1H3-222	ENST00000483882	NUPL2	O15504	423 aa	Known RBP	11.28	□□□□□ -0.6
NR1H3-222	ENST00000483882	FRMD6-AS1	P0C7T7	363 aa		11.28	□□□□□ -0.6
NR1H3-222	ENST00000483882	PVALB	P20472	110 aa	Predicted RBP	11.28	□□□□□ -0.6
NR1H3-222	ENST00000483882	OR10J1	P30954	320 aa		11.28	□□□□□ -0.6
NR1H3-222	ENST00000483882	CAV2	P51636	162 aa		11.28	□□□□□ -0.6
NR1H3-222	ENST00000483882	TM4SF20	Q53R12	229 aa		11.28	□□□□□ -0.6
NR1H3-222	ENST00000483882	TMEM190	Q8WZ59	177 aa		11.28	□□□□□ -0.6
NR1H3-222	ENST00000483882	ST8SIA2	Q92186	375 aa		11.28	□□□□□ -0.6
NR1H3-222	ENST00000483882	ZFAND3	Q9H8U3	227 aa		11.28	□□□□□ -0.6
NR1H3-222	ENST00000483882	ZNF320	A2RRD8	509 aa		11.27	□□□□□ -0.61
NR1H3-222	ENST00000483882		A8MWP6	167 aa		11.27	□□□□□ -0.61
NR1H3-222	ENST00000483882	P2RY1	P47900	373 aa		11.27	□□□□□ -0.61
NR1H3-222	ENST00000483882	DLK1	P80370	383 aa		11.27	□□□□□ -0.61
NR1H3-222	ENST00000483882	FAM106A	Q4KMX7	169 aa		11.27	□□□□□ -0.61
NR1H3-222	ENST00000483882	CASC10	Q5T4H9	136 aa		11.27	□□□□□ -0.61
NR1H3-222	ENST00000483882	TOMM20L	Q6UXN7	152 aa		11.27	□□□□□ -0.61
NR1H3-222	ENST00000483882	THAP8	Q8NA92	274 aa		11.27	□□□□□ -0.61
NR1H3-222	ENST00000483882	OR10P1	Q8NGE3	313 aa		11.27	□□□□□ -0.61
NR1H3-222	ENST00000483882	OR1S2	Q8NGQ3	325 aa		11.27	□□□□□ -0.61
NR1H3-222	ENST00000483882	SLC35E1	Q96K37	410 aa		11.27	□□□□□ -0.61
NR1H3-222	ENST00000483882	ZMAT4	Q9H898	229 aa		11.27	□□□□□ -0.61
NR1H3-222	ENST00000483882	TRAV30	A0A087WSZ9	112 aa		11.26	□□□□□ -0.61
NR1H3-222	ENST00000483882	C2orf70	A6NJV1	201 aa		11.26	□□□□□ -0.61
NR1H3-222	ENST00000483882	ZNF207	O43670	478 aa	Known RBP	11.26	□□□□□ -0.61
NR1H3-222	ENST00000483882	YPEL3	P61236	119 aa	Predicted RBP	11.26	□□□□□ -0.61
NR1H3-222	ENST00000483882	EWSR1	Q01844	656 aa	Known RBP eCLIP	11.26	□□□□□ -0.61
NR1H3-222	ENST00000483882	NHLH2	Q02577	135 aa		11.26	□□□□□ -0.61
NR1H3-222	ENST00000483882	ZNF90	Q03938	601 aa		11.26	□□□□□ -0.61
NR1H3-222	ENST00000483882	CLLU1	Q5K131	121 aa		11.26	□□□□□ -0.61
NR1H3-222	ENST00000483882	ZNF600	Q6ZNG1	722 aa		11.26	□□□□□ -0.61
NR1H3-222	ENST00000483882	TMEM182	Q6ZP80	229 aa	Predicted RBP	11.26	□□□□□ -0.61
NR1H3-222	ENST00000483882	STOML3	Q8TAV4	291 aa		11.26	□□□□□ -0.61
NR1H3-222	ENST00000483882	ZNF471	Q9BX82	626 aa	Predicted RBP	11.26	□□□□□ -0.61
NR1H3-222	ENST00000483882	PUS1	Q9Y606	427 aa	Known RBP eCLIP	11.26	□□□□□ -0.61
NR1H3-222	ENST00000483882	TAAR5	O14804	337 aa		11.25	□□□□□ -0.61
NR1H3-222	ENST00000483882	C8orf88	P0DMB2	117 aa		11.25	□□□□□ -0.61
NR1H3-222	ENST00000483882	RPL12	P30050	165 aa	Known RBP	11.25	□□□□□ -0.61
NR1H3-222	ENST00000483882	SULT1A1	P50225	295 aa		11.25	□□□□□ -0.61
NR1H3-222	ENST00000483882	REL	Q04864	619 aa	Predicted RBP	11.25	□□□□□ -0.61
NR1H3-222	ENST00000483882	SLC38A11	Q08AI6	406 aa		11.25	□□□□□ -0.61
NR1H3-222	ENST00000483882	TMEM144	Q7Z5S9	345 aa		11.25	□□□□□ -0.61
NR1H3-222	ENST00000483882	TMEM217	Q8N7C4	229 aa		11.25	□□□□□ -0.61
NR1H3-222	ENST00000483882	ELOVL1	Q9BW60	279 aa		11.25	□□□□□ -0.61
NR1H3-222	ENST00000483882	SIGLEC8	Q9NYZ4	499 aa		11.25	□□□□□ -0.61
NR1H3-222	ENST00000483882	SELENOK	Q9Y6D0	94 aa		11.25	□□□□□ -0.61
NR1H3-222	ENST00000483882	HUWE1	Q7Z6Z7	4374 aa	Known RBP	11.24	□□□□□ -0.61
NR1H3-222	ENST00000483882	FNDC10	F2Z333	226 aa		11.24	□□□□□ -0.61
NR1H3-222	ENST00000483882		K7EMT4	169 aa		11.24	□□□□□ -0.61
NR1H3-222	ENST00000483882	SCAF4	O95104	1147 aa	Known RBP	11.24	□□□□□ -0.61
NR1H3-222	ENST00000483882	TOMM40	O96008	361 aa		11.24	□□□□□ -0.61
NR1H3-222	ENST00000483882	PSG1	P11464	419 aa		11.24	□□□□□ -0.61
NR1H3-222	ENST00000483882	FOLR2	P14207	255 aa		11.24	□□□□□ -0.61
NR1H3-222	ENST00000483882	CBLN1	P23435	193 aa		11.24	□□□□□ -0.61
NR1H3-222	ENST00000483882	ELL	P55199	621 aa	Predicted RBP	11.24	□□□□□ -0.61
NR1H3-222	ENST00000483882	RAB14	P61106	215 aa		11.24	□□□□□ -0.61
NR1H3-222	ENST00000483882	VWC2	Q2TAL6	325 aa		11.24	□□□□□ -0.61
NR1H3-222	ENST00000483882	SLC7A5P1	Q8MH63	180 aa		11.24	□□□□□ -0.61
NR1H3-222	ENST00000483882	PHYHIPL	Q96FC7	376 aa		11.24	□□□□□ -0.61
NR1H3-222	ENST00000483882	TRGV9	Q99603	122 aa		11.24	□□□□□ -0.61
NR1H3-222	ENST00000483882	C20orf24	Q9BUV8	137 aa		11.24	□□□□□ -0.61
NR1H3-222	ENST00000483882	GGACT	Q9BVM4	153 aa		11.24	□□□□□ -0.61
NR1H3-222	ENST00000483882	CYTL1	Q9NRR1	136 aa		11.24	□□□□□ -0.61
NR1H3-222	ENST00000483882	PEMT	Q9UBM1	199 aa		11.24	□□□□□ -0.61
NR1H3-222	ENST00000483882	SORL1	Q92673	2214 aa		11.23	□□□□□ -0.61
NR1H3-222	ENST00000483882	ZFP92	A6NM28	416 aa		11.23	□□□□□ -0.61
NR1H3-222	ENST00000483882	YIF1A	O95070	293 aa		11.23	□□□□□ -0.61
NR1H3-222	ENST00000483882	IGLV1-51	P01701	117 aa		11.23	□□□□□ -0.61
NR1H3-222	ENST00000483882	APOH	P02749	345 aa	Predicted RBP	11.23	□□□□□ -0.61
NR1H3-222	ENST00000483882	TPT1	P13693	172 aa	Known RBP	11.23	□□□□□ -0.61
NR1H3-222	ENST00000483882	EIF5A	P63241	154 aa	Known RBP	11.23	□□□□□ -0.61
NR1H3-222	ENST00000483882	AKR1C1	Q04828	323 aa		11.23	□□□□□ -0.61
NR1H3-222	ENST00000483882	ALKAL2	Q6UX46	152 aa		11.23	□□□□□ -0.61
NR1H3-222	ENST00000483882	FBXL17	Q9UF56	701 aa		11.23	□□□□□ -0.61
NR1H3-222	ENST00000483882	MLX	Q9UH92	298 aa		11.23	□□□□□ -0.61
NR1H3-222	ENST00000483882	UFC1	Q9Y3C8	167 aa		11.23	□□□□□ -0.61
NR1H3-222	ENST00000483882	STAB2	Q8WWQ8	2551 aa		11.23	□□□□□ -0.61
NR1H3-222	ENST00000483882	SMCO3	A2RU48	225 aa		11.22	□□□□□ -0.61
NR1H3-222	ENST00000483882	LINC00862	A6NCI5	91 aa		11.22	□□□□□ -0.61
NR1H3-222	ENST00000483882	IZUMO1R	A6ND01	250 aa		11.22	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms