RNA–Protein interactions for RNA: ENST00000483376.1

COL2A1-206, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 5

Gene COL2A1, Length 641 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-206ENST00000483376 VAMP2P63027 116 aa12.19□□□□□ -0.46
COL2A1-206ENST00000483376 USF2Q15853 346 aaPredicted RBP12.19□□□□□ -0.46
COL2A1-206ENST00000483376 GUCA2BQ16661 112 aa12.19□□□□□ -0.46
COL2A1-206ENST00000483376 NARS2Q96I59 477 aaKnown RBP12.19□□□□□ -0.46
COL2A1-206ENST00000483376 LYRM2Q9NU23 88 aaPredicted RBP12.19□□□□□ -0.46
COL2A1-206ENST00000483376 LSM5Q9Y4Y9 91 aaKnown RBP12.19□□□□□ -0.46
COL2A1-206ENST00000483376 OR4C46A6NHA9 309 aa12.18□□□□□ -0.46
COL2A1-206ENST00000483376 SSNA1O43805 119 aa12.18□□□□□ -0.46
COL2A1-206ENST00000483376 DEDDO75618 318 aa12.18□□□□□ -0.46
COL2A1-206ENST00000483376 HNRNPCP07910 306 aaKnown RBP eCLIP12.18□□□□□ -0.46
COL2A1-206ENST00000483376 NHLRC4P0CG21 123 aaPredicted RBP12.18□□□□□ -0.46
COL2A1-206ENST00000483376 H2BFSP57053 126 aa12.18□□□□□ -0.46
COL2A1-206ENST00000483376 ST8SIA2Q92186 375 aa12.18□□□□□ -0.46
COL2A1-206ENST00000483376 RNF125Q96EQ8 232 aa12.18□□□□□ -0.46
COL2A1-206ENST00000483376 NPVFQ9HCQ7 196 aa12.18□□□□□ -0.46
COL2A1-206ENST00000483376 SLC45A2Q9UMX9 530 aa12.18□□□□□ -0.46
COL2A1-206ENST00000483376 APOHP02749 345 aaPredicted RBP12.17□□□□□ -0.46
COL2A1-206ENST00000483376 CD7P09564 240 aa12.17□□□□□ -0.46
COL2A1-206ENST00000483376 ZNF90Q03938 601 aa12.17□□□□□ -0.46
COL2A1-206ENST00000483376 AKR1C1Q04828 323 aa12.17□□□□□ -0.46
COL2A1-206ENST00000483376 RGS21Q2M5E4 152 aa12.17□□□□□ -0.46
COL2A1-206ENST00000483376 GRAMD2BQ96HH9 432 aa12.17□□□□□ -0.46
COL2A1-206ENST00000483376 MGAT4CQ9UBM8 478 aa12.17□□□□□ -0.46
COL2A1-206ENST00000483376 PFDN2Q9UHV9 154 aa12.17□□□□□ -0.46
COL2A1-206ENST00000483376 RABAC1Q9UI14 185 aa12.17□□□□□ -0.46
COL2A1-206ENST00000483376 BUB3O43684 328 aa12.16□□□□□ -0.46
COL2A1-206ENST00000483376 CCNKO75909 580 aa12.16□□□□□ -0.46
COL2A1-206ENST00000483376 FRMD6-AS1P0C7T7 363 aa12.16□□□□□ -0.46
COL2A1-206ENST00000483376 EIF2B2P49770 351 aaKnown RBP12.16□□□□□ -0.46
COL2A1-206ENST00000483376 CAV2P51636 162 aa12.16□□□□□ -0.46
COL2A1-206ENST00000483376 CMC4P56277 68 aaPredicted RBP12.16□□□□□ -0.46
COL2A1-206ENST00000483376 S100A10P60903 97 aa12.16□□□□□ -0.46
COL2A1-206ENST00000483376 SELENOTP62341 195 aa12.16□□□□□ -0.46
COL2A1-206ENST00000483376 PAFAH1B2P68402 229 aa12.16□□□□□ -0.46
COL2A1-206ENST00000483376 LINC00322Q6ZN03 302 aaPredicted RBP12.16□□□□□ -0.46
COL2A1-206ENST00000483376 TCF24Q7RTU0 167 aa12.16□□□□□ -0.46
COL2A1-206ENST00000483376 LILRB2Q8N423 598 aa12.16□□□□□ -0.46
COL2A1-206ENST00000483376 ALG5Q9Y673 324 aa12.16□□□□□ -0.46
COL2A1-206ENST00000483376 HUWE1Q7Z6Z7 4374 aaKnown RBP12.15□□□□□ -0.46
COL2A1-206ENST00000483376 IGHV3-49A0A0A0MS15 119 aa12.15□□□□□ -0.46
COL2A1-206ENST00000483376 HELTA6NFD8 242 aa12.15□□□□□ -0.46
COL2A1-206ENST00000483376 E5RGE8 158 aa12.15□□□□□ -0.46
COL2A1-206ENST00000483376 SIX6O95475 246 aa12.15□□□□□ -0.46
COL2A1-206ENST00000483376 RLN2P04090 185 aa12.15□□□□□ -0.46
COL2A1-206ENST00000483376 P2RY1P47900 373 aa12.15□□□□□ -0.46
COL2A1-206ENST00000483376 SULT1A1P50225 295 aa12.15□□□□□ -0.46
COL2A1-206ENST00000483376 ARL16Q0P5N6 197 aa12.15□□□□□ -0.46
COL2A1-206ENST00000483376 OXA1LQ15070 435 aa12.15□□□□□ -0.46
COL2A1-206ENST00000483376 VWC2Q2TAL6 325 aa12.15□□□□□ -0.46
COL2A1-206ENST00000483376 C16orf54Q6UWD8 224 aa12.15□□□□□ -0.46
COL2A1-206ENST00000483376 TMEM252Q8N6L7 170 aa12.15□□□□□ -0.46
COL2A1-206ENST00000483376 GLMPQ8WWB7 406 aa12.15□□□□□ -0.46
COL2A1-206ENST00000483376 COL7A1Q02388 2944 aa12.14□□□□□ -0.47
COL2A1-206ENST00000483376 IGHV3OR16-13A0A075B7E8 117 aa12.14□□□□□ -0.47
COL2A1-206ENST00000483376 IGHV3-74A0A0B4J1X5 117 aa12.14□□□□□ -0.47
COL2A1-206ENST00000483376 OR11H12B2RN74 326 aa12.14□□□□□ -0.47
COL2A1-206ENST00000483376 DFFBO76075 338 aa12.14□□□□□ -0.47
COL2A1-206ENST00000483376 PET100P0DJ07 73 aa12.14□□□□□ -0.47
COL2A1-206ENST00000483376 S100A11P31949 105 aa12.14□□□□□ -0.47
COL2A1-206ENST00000483376 BCAP31P51572 246 aa12.14□□□□□ -0.47
COL2A1-206ENST00000483376 AP2S1P53680 142 aaPredicted RBP12.14□□□□□ -0.47
COL2A1-206ENST00000483376 PLP1P60201 277 aa12.14□□□□□ -0.47
COL2A1-206ENST00000483376 C1orf194Q5T5A4 169 aa12.14□□□□□ -0.47
COL2A1-206ENST00000483376 TEPPQ6URK8 271 aa12.14□□□□□ -0.47
COL2A1-206ENST00000483376 STX12Q86Y82 276 aa12.14□□□□□ -0.47
COL2A1-206ENST00000483376 BPIFCQ8NFQ6 507 aa12.14□□□□□ -0.47
COL2A1-206ENST00000483376 PPP1R1CQ8WVI7 109 aa12.14□□□□□ -0.47
COL2A1-206ENST00000483376 FAM24AA6NFZ4 105 aa12.13□□□□□ -0.47
COL2A1-206ENST00000483376 S100A7P31151 101 aa12.13□□□□□ -0.47
COL2A1-206ENST00000483376 HBG1P69891 147 aa12.13□□□□□ -0.47
COL2A1-206ENST00000483376 HBG2P69892 147 aa12.13□□□□□ -0.47
COL2A1-206ENST00000483376 SLC38A11Q08AI6 406 aa12.13□□□□□ -0.47
COL2A1-206ENST00000483376 ODF3L2Q3SX64 289 aa12.13□□□□□ -0.47
COL2A1-206ENST00000483376 CYP2G1PQ6ZSU1 146 aa12.13□□□□□ -0.47
COL2A1-206ENST00000483376 ASB13Q8WXK3 278 aa12.13□□□□□ -0.47
COL2A1-206ENST00000483376 MS4A6AQ9H2W1 248 aa12.13□□□□□ -0.47
COL2A1-206ENST00000483376 SELENOKQ9Y6D0 94 aa12.13□□□□□ -0.47
COL2A1-206ENST00000483376 IGSF23A1L1A6 192 aa12.12□□□□□ -0.47
COL2A1-206ENST00000483376 SMCO3A2RU48 225 aa12.12□□□□□ -0.47
COL2A1-206ENST00000483376 H0YIZ8 118 aa12.12□□□□□ -0.47
COL2A1-206ENST00000483376 MPC2O95563 127 aa12.12□□□□□ -0.47
COL2A1-206ENST00000483376 LYZP61626 148 aa12.12□□□□□ -0.47
COL2A1-206ENST00000483376 RRAS2P62070 204 aaPredicted RBP12.12□□□□□ -0.47
COL2A1-206ENST00000483376 BAXQ07812 192 aa12.12□□□□□ -0.47
COL2A1-206ENST00000483376 ATP6V1FQ16864 119 aa12.12□□□□□ -0.47
COL2A1-206ENST00000483376 PXDC1Q5TGL8 231 aa12.12□□□□□ -0.47
COL2A1-206ENST00000483376 DEFB125Q8N687 156 aa12.12□□□□□ -0.47
COL2A1-206ENST00000483376 CHAC2Q8WUX2 184 aa12.12□□□□□ -0.47
COL2A1-206ENST00000483376 SLC25A31Q9H0C2 315 aa12.12□□□□□ -0.47
COL2A1-206ENST00000483376 TUBA4BQ9H853 241 aa12.12□□□□□ -0.47
COL2A1-206ENST00000483376 SEPSECSQ9HD40 501 aaKnown RBP12.12□□□□□ -0.47
COL2A1-206ENST00000483376 FBXL17Q9UF56 701 aa12.12□□□□□ -0.47
COL2A1-206ENST00000483376 IGHV3-66A0A0C4DH42 116 aa12.11□□□□□ -0.47
COL2A1-206ENST00000483376 CST7O76096 145 aa12.11□□□□□ -0.47
COL2A1-206ENST00000483376 OR2F1Q13607 317 aa12.11□□□□□ -0.47
COL2A1-206ENST00000483376 TMEM182Q6ZP80 229 aaPredicted RBP12.11□□□□□ -0.47
COL2A1-206ENST00000483376 ZNF546Q86UE3 836 aa12.11□□□□□ -0.47
COL2A1-206ENST00000483376 SBSPONQ8IVN8 264 aa12.11□□□□□ -0.47
COL2A1-206ENST00000483376 STPG3Q8N7X2 389 aa12.11□□□□□ -0.47
COL2A1-206ENST00000483376 DCANP1Q8TF63 244 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms