RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 UBQLN2Q9UHD9 624 aa13.72□□□□□ -0.21
SMIM4-204ENST00000482728 PFDN2Q9UHV9 154 aa13.72□□□□□ -0.21
SMIM4-204ENST00000482728 RBMY1BA6NDE4 496 aaKnown RBP13.71□□□□□ -0.21
SMIM4-204ENST00000482728 RBMY1EA6NEQ0 496 aaKnown RBP13.71□□□□□ -0.21
SMIM4-204ENST00000482728 SNRPGP15A8MWD9 76 aa13.71□□□□□ -0.21
SMIM4-204ENST00000482728 INMT-MINDY4F8WBC2 141 aa13.71□□□□□ -0.21
SMIM4-204ENST00000482728 L7N2F9 121 aa13.71□□□□□ -0.21
SMIM4-204ENST00000482728 RBMY1DP0C7P1 496 aaKnown RBP13.71□□□□□ -0.21
SMIM4-204ENST00000482728 P2RY1P47900 373 aa13.71□□□□□ -0.21
SMIM4-204ENST00000482728 EIF2B2P49770 351 aaKnown RBP13.71□□□□□ -0.21
SMIM4-204ENST00000482728 TAS2R30P59541 319 aa13.71□□□□□ -0.21
SMIM4-204ENST00000482728 VAMP2P63027 116 aa13.71□□□□□ -0.21
SMIM4-204ENST00000482728 ZNF90Q03938 601 aa13.71□□□□□ -0.21
SMIM4-204ENST00000482728 AKR1C1Q04828 323 aa13.71□□□□□ -0.21
SMIM4-204ENST00000482728 LINC00322Q6ZN03 302 aaPredicted RBP13.71□□□□□ -0.21
SMIM4-204ENST00000482728 RCHY1Q96PM5 261 aa13.71□□□□□ -0.21
SMIM4-204ENST00000482728 TRGV9Q99603 122 aa13.71□□□□□ -0.21
SMIM4-204ENST00000482728 TM2D3Q9BRN9 247 aa13.71□□□□□ -0.21
SMIM4-204ENST00000482728 PBDC1Q9BVG4 233 aa13.71□□□□□ -0.21
SMIM4-204ENST00000482728 RABAC1Q9UI14 185 aa13.71□□□□□ -0.21
SMIM4-204ENST00000482728 NBEAL2Q6ZNJ1 2754 aa13.71□□□□□ -0.22
SMIM4-204ENST00000482728 SMCO3A2RU48 225 aa13.7□□□□□ -0.22
SMIM4-204ENST00000482728 PRAF2O60831 178 aa13.7□□□□□ -0.22
SMIM4-204ENST00000482728 TSC22D2O75157 780 aa13.7□□□□□ -0.22
SMIM4-204ENST00000482728 PAX9P55771 341 aa13.7□□□□□ -0.22
SMIM4-204ENST00000482728 OR2F1Q13607 317 aa13.7□□□□□ -0.22
SMIM4-204ENST00000482728 USF2Q15853 346 aaPredicted RBP13.7□□□□□ -0.22
SMIM4-204ENST00000482728 THAP8Q8NA92 274 aa13.7□□□□□ -0.22
SMIM4-204ENST00000482728 RNF125Q96EQ8 232 aa13.7□□□□□ -0.22
SMIM4-204ENST00000482728 WWC2-AS2Q96NR7 200 aa13.7□□□□□ -0.22
SMIM4-204ENST00000482728 FAM110AQ9BQ89 295 aa13.7□□□□□ -0.22
SMIM4-204ENST00000482728 SPATA25Q9BR10 227 aa13.7□□□□□ -0.22
SMIM4-204ENST00000482728 MS4A6AQ9H2W1 248 aa13.7□□□□□ -0.22
SMIM4-204ENST00000482728 LSM5Q9Y4Y9 91 aaKnown RBP13.7□□□□□ -0.22
SMIM4-204ENST00000482728 U3KQE9 123 aa13.7□□□□□ -0.22
SMIM4-204ENST00000482728 IGKV1D-37A0A075B6S9 117 aa13.69□□□□□ -0.22
SMIM4-204ENST00000482728 LOC102724200A0A096LPH7 203 aaPredicted RBP13.69□□□□□ -0.22
SMIM4-204ENST00000482728 HELTA6NFD8 242 aa13.69□□□□□ -0.22
SMIM4-204ENST00000482728 PRSS46E5RG02 174 aa13.69□□□□□ -0.22
SMIM4-204ENST00000482728 METTL15P1P0C7V9 234 aa13.69□□□□□ -0.22
SMIM4-204ENST00000482728 ACOT7LQ6ZUV0 252 aa13.69□□□□□ -0.22
SMIM4-204ENST00000482728 OR10P1Q8NGE3 313 aa13.69□□□□□ -0.22
SMIM4-204ENST00000482728 RCL1Q9Y2P8 373 aaKnown RBP13.69□□□□□ -0.22
SMIM4-204ENST00000482728 C7orf66A4D0T2 115 aa13.68□□□□□ -0.22
SMIM4-204ENST00000482728 CFDP00746 253 aaPredicted RBP13.68□□□□□ -0.22
SMIM4-204ENST00000482728 PVALBP20472 110 aaPredicted RBP13.68□□□□□ -0.22
SMIM4-204ENST00000482728 NUP62P37198 522 aaPredicted RBP13.68□□□□□ -0.22
SMIM4-204ENST00000482728 AP2S1P53680 142 aaPredicted RBP13.68□□□□□ -0.22
SMIM4-204ENST00000482728 LYZP61626 148 aa13.68□□□□□ -0.22
SMIM4-204ENST00000482728 ODF3L2Q3SX64 289 aa13.68□□□□□ -0.22
SMIM4-204ENST00000482728 TMEM14EPQ6UXP3 125 aa13.68□□□□□ -0.22
SMIM4-204ENST00000482728 STXBP6Q8NFX7 210 aa13.68□□□□□ -0.22
SMIM4-204ENST00000482728 MARVELD1Q9BSK0 173 aa13.68□□□□□ -0.22
SMIM4-204ENST00000482728 GGTLC1Q9BX51 225 aa13.68□□□□□ -0.22
SMIM4-204ENST00000482728 IGKV1OR2-108A0A075B7D4 117 aa13.67□□□□□ -0.22
SMIM4-204ENST00000482728 TRAV2A0A0B4J234 112 aa13.67□□□□□ -0.22
SMIM4-204ENST00000482728 BCAP31P51572 246 aa13.67□□□□□ -0.22
SMIM4-204ENST00000482728 C16orf54Q6UWD8 224 aa13.67□□□□□ -0.22
SMIM4-204ENST00000482728 TMEM144Q7Z5S9 345 aa13.67□□□□□ -0.22
SMIM4-204ENST00000482728 PPP1R14BQ96C90 147 aa13.67□□□□□ -0.22
SMIM4-204ENST00000482728 PMS2P5A8MQ11 134 aa13.66□□□□□ -0.22
SMIM4-204ENST00000482728 K7EPK0 472 aa13.66□□□□□ -0.22
SMIM4-204ENST00000482728 BUB3O43684 328 aa13.66□□□□□ -0.22
SMIM4-204ENST00000482728 S100A10P60903 97 aa13.66□□□□□ -0.22
SMIM4-204ENST00000482728 RRAS2P62070 204 aaPredicted RBP13.66□□□□□ -0.22
SMIM4-204ENST00000482728 DLK1P80370 383 aa13.66□□□□□ -0.22
SMIM4-204ENST00000482728 APRG1Q8IVJ8 170 aa13.66□□□□□ -0.22
SMIM4-204ENST00000482728 BPIFCQ8NFQ6 507 aa13.66□□□□□ -0.22
SMIM4-204ENST00000482728 CITED4Q96RK1 184 aa13.66□□□□□ -0.22
SMIM4-204ENST00000482728 MGAT4CQ9UBM8 478 aa13.66□□□□□ -0.22
SMIM4-204ENST00000482728 TENM3Q9P273 2699 aa13.66□□□□□ -0.22
SMIM4-204ENST00000482728 CCNKO75909 580 aa13.65□□□□□ -0.22
SMIM4-204ENST00000482728 CAV2P51636 162 aa13.65□□□□□ -0.22
SMIM4-204ENST00000482728 GLMPQ8WWB7 406 aa13.65□□□□□ -0.22
SMIM4-204ENST00000482728 MAP6D1Q9H9H5 199 aa13.65□□□□□ -0.22
SMIM4-204ENST00000482728 NPVFQ9HCQ7 196 aa13.65□□□□□ -0.22
SMIM4-204ENST00000482728 GOSR2O14653 212 aa13.64□□□□□ -0.23
SMIM4-204ENST00000482728 APOC4P55056 127 aa13.64□□□□□ -0.23
SMIM4-204ENST00000482728 FNDC10F2Z333 226 aa13.63□□□□□ -0.23
SMIM4-204ENST00000482728 K7EQG2 157 aa13.63□□□□□ -0.23
SMIM4-204ENST00000482728 SSNA1O43805 119 aa13.63□□□□□ -0.23
SMIM4-204ENST00000482728 DEDDO75618 318 aa13.63□□□□□ -0.23
SMIM4-204ENST00000482728 RPL35AP18077 110 aaKnown RBP13.63□□□□□ -0.23
SMIM4-204ENST00000482728 S100A7P31151 101 aa13.63□□□□□ -0.23
SMIM4-204ENST00000482728 DEFB131AP59861 70 aa13.63□□□□□ -0.23
SMIM4-204ENST00000482728 IL15RAQ13261 267 aa13.63□□□□□ -0.23
SMIM4-204ENST00000482728 RAB32Q13637 225 aa13.63□□□□□ -0.23
SMIM4-204ENST00000482728 SIGLEC15Q6ZMC9 328 aa13.63□□□□□ -0.23
SMIM4-204ENST00000482728 GGACTQ9BVM4 153 aa13.63□□□□□ -0.23
SMIM4-204ENST00000482728 SIX6O95475 246 aa13.62□□□□□ -0.23
SMIM4-204ENST00000482728 RLN2P04090 185 aa13.62□□□□□ -0.23
SMIM4-204ENST00000482728 ORM2P19652 201 aa13.62□□□□□ -0.23
SMIM4-204ENST00000482728 GATA2P23769 480 aaPredicted RBP13.62□□□□□ -0.23
SMIM4-204ENST00000482728 SELENOTP62341 195 aa13.62□□□□□ -0.23
SMIM4-204ENST00000482728 CYCSP99999 105 aaKnown RBP13.62□□□□□ -0.23
SMIM4-204ENST00000482728 C1orf194Q5T5A4 169 aa13.62□□□□□ -0.23
SMIM4-204ENST00000482728 TEPPQ6URK8 271 aa13.62□□□□□ -0.23
SMIM4-204ENST00000482728 CYP2G1PQ6ZSU1 146 aa13.62□□□□□ -0.23
SMIM4-204ENST00000482728 STPG3Q8N7X2 389 aa13.62□□□□□ -0.23
SMIM4-204ENST00000482728 RETNQ9HD89 108 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms