RNA–Protein interactions for RNA: ENST00000481323.1

SNX5-210, Transcript of sorting nexin 5, human

TSL 3 BASIC

Gene SNX5, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNX5-210	ENST00000481323	LEMD1	Q68G75	181 aa		13.66	□□□□□ -0.22
SNX5-210	ENST00000481323	GLMP	Q8WWB7	406 aa		13.66	□□□□□ -0.22
SNX5-210	ENST00000481323	CSMD3	Q7Z407	3707 aa		13.66	□□□□□ -0.22
SNX5-210	ENST00000481323	PRSS46	E5RG02	174 aa		13.65	□□□□□ -0.22
SNX5-210	ENST00000481323	IFNA21	P01568	189 aa		13.65	□□□□□ -0.22
SNX5-210	ENST00000481323	POLR2G	P62487	172 aa	Known RBP eCLIP	13.65	□□□□□ -0.22
SNX5-210	ENST00000481323	RPP30	P78346	268 aa	Known RBP	13.65	□□□□□ -0.22
SNX5-210	ENST00000481323	CNPY1	Q3B7I2	92 aa		13.65	□□□□□ -0.22
SNX5-210	ENST00000481323	SPANXN5	Q5MJ07	72 aa		13.65	□□□□□ -0.22
SNX5-210	ENST00000481323	OR4D5	Q8NGN0	318 aa		13.65	□□□□□ -0.22
SNX5-210	ENST00000481323	DCANP1	Q8TF63	244 aa		13.65	□□□□□ -0.22
SNX5-210	ENST00000481323	RNF125	Q96EQ8	232 aa		13.65	□□□□□ -0.22
SNX5-210	ENST00000481323	CSTL1	Q9H114	145 aa		13.65	□□□□□ -0.22
SNX5-210	ENST00000481323	C20orf85	Q9H1P6	137 aa		13.65	□□□□□ -0.22
SNX5-210	ENST00000481323	TP53TG1	Q9Y2A0	90 aa		13.65	□□□□□ -0.22
SNX5-210	ENST00000481323	STARD9	Q9P2P6	4700 aa		13.64	□□□□□ -0.23
SNX5-210	ENST00000481323	TENM2	Q9NT68	2774 aa		13.64	□□□□□ -0.23
SNX5-210	ENST00000481323	IGKV1OR2-108	A0A075B7D4	117 aa		13.64	□□□□□ -0.23
SNX5-210	ENST00000481323	HELT	A6NFD8	242 aa		13.64	□□□□□ -0.23
SNX5-210	ENST00000481323		A6NHS1	94 aa		13.64	□□□□□ -0.23
SNX5-210	ENST00000481323		H3BP45	60 aa		13.64	□□□□□ -0.23
SNX5-210	ENST00000481323	BUB3	O43684	328 aa		13.64	□□□□□ -0.23
SNX5-210	ENST00000481323	TCRB	P04435	133 aa		13.64	□□□□□ -0.23
SNX5-210	ENST00000481323	MITD1	Q8WV92	249 aa		13.64	□□□□□ -0.23
SNX5-210	ENST00000481323	RNF183	Q96D59	192 aa		13.64	□□□□□ -0.23
SNX5-210	ENST00000481323	CCDC32	Q9BV29	185 aa		13.64	□□□□□ -0.23
SNX5-210	ENST00000481323	PBDC1	Q9BVG4	233 aa		13.64	□□□□□ -0.23
SNX5-210	ENST00000481323	DYNC2H1	Q8NCM8	4307 aa	Known RBP	13.63	□□□□□ -0.23
SNX5-210	ENST00000481323	TRAV6	A0A075B6T7	132 aa		13.63	□□□□□ -0.23
SNX5-210	ENST00000481323	NKX2-1	P43699	371 aa	Predicted RBP	13.63	□□□□□ -0.23
SNX5-210	ENST00000481323	OR2F1	Q13607	317 aa		13.63	□□□□□ -0.23
SNX5-210	ENST00000481323	LINC00299	Q6ZSB3	139 aa		13.63	□□□□□ -0.23
SNX5-210	ENST00000481323	TRGV9	Q99603	122 aa		13.63	□□□□□ -0.23
SNX5-210	ENST00000481323	STRAP	Q9Y3F4	350 aa	Known RBP	13.63	□□□□□ -0.23
SNX5-210	ENST00000481323	ZNF688	P0C7X2	276 aa		13.62	□□□□□ -0.23
SNX5-210	ENST00000481323	EIF2B2	P49770	351 aa	Known RBP	13.62	□□□□□ -0.23
SNX5-210	ENST00000481323	AP2S1	P53680	142 aa	Predicted RBP	13.62	□□□□□ -0.23
SNX5-210	ENST00000481323	IAH1	Q2TAA2	248 aa	Predicted RBP	13.62	□□□□□ -0.23
SNX5-210	ENST00000481323	THAP8	Q8NA92	274 aa		13.62	□□□□□ -0.23
SNX5-210	ENST00000481323	SNRPGP15	A8MWD9	76 aa		13.61	□□□□□ -0.23
SNX5-210	ENST00000481323	SSSCA1	O60232	199 aa		13.61	□□□□□ -0.23
SNX5-210	ENST00000481323	FABP1	P07148	127 aa		13.61	□□□□□ -0.23
SNX5-210	ENST00000481323	PAX9	P55771	341 aa		13.61	□□□□□ -0.23
SNX5-210	ENST00000481323	LYZ	P61626	148 aa		13.61	□□□□□ -0.23
SNX5-210	ENST00000481323	IL17D	Q8TAD2	202 aa		13.61	□□□□□ -0.23
SNX5-210	ENST00000481323	PSENEN	Q9NZ42	101 aa		13.61	□□□□□ -0.23
SNX5-210	ENST00000481323		A0A0J9YWU9	116 aa		13.6	□□□□□ -0.23
SNX5-210	ENST00000481323	KNCN	A6PVL3	124 aa		13.6	□□□□□ -0.23
SNX5-210	ENST00000481323	OR8G2P	Q6IF36	304 aa		13.6	□□□□□ -0.23
SNX5-210	ENST00000481323	SIGLEC15	Q6ZMC9	328 aa		13.6	□□□□□ -0.23
SNX5-210	ENST00000481323	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	13.6	□□□□□ -0.23
SNX5-210	ENST00000481323	SMIM8	Q96KF7	97 aa		13.6	□□□□□ -0.23
SNX5-210	ENST00000481323	NUDT15	Q9NV35	164 aa		13.6	□□□□□ -0.23
SNX5-210	ENST00000481323	GSKIP	Q9P0R6	139 aa		13.6	□□□□□ -0.23
SNX5-210	ENST00000481323	AGRN	O00468	2067 aa		13.59	□□□□□ -0.23
SNX5-210	ENST00000481323	SCGB1D2	O95969	90 aa		13.59	□□□□□ -0.23
SNX5-210	ENST00000481323	EWSR1	Q01844	656 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
SNX5-210	ENST00000481323	ACOT7L	Q6ZUV0	252 aa		13.59	□□□□□ -0.23
SNX5-210	ENST00000481323	STH	Q8IWL8	128 aa		13.59	□□□□□ -0.23
SNX5-210	ENST00000481323	S100Z	Q8WXG8	99 aa		13.59	□□□□□ -0.23
SNX5-210	ENST00000481323	SEC22C	Q9BRL7	303 aa		13.59	□□□□□ -0.23
SNX5-210	ENST00000481323	TBC1D24	Q9ULP9	559 aa		13.59	□□□□□ -0.23
SNX5-210	ENST00000481323	PMS2P5	A8MQ11	134 aa		13.58	□□□□□ -0.24
SNX5-210	ENST00000481323	CCS	O14618	274 aa		13.58	□□□□□ -0.24
SNX5-210	ENST00000481323	CCNK	O75909	580 aa		13.58	□□□□□ -0.24
SNX5-210	ENST00000481323	PSMG4	Q5JS54	123 aa		13.58	□□□□□ -0.24
SNX5-210	ENST00000481323	TMEM182	Q6ZP80	229 aa	Predicted RBP	13.58	□□□□□ -0.24
SNX5-210	ENST00000481323	ZNF431	Q8TF32	576 aa	Predicted RBP	13.58	□□□□□ -0.24
SNX5-210	ENST00000481323	NRN1	Q9NPD7	142 aa		13.58	□□□□□ -0.24
SNX5-210	ENST00000481323	PFDN2	Q9UHV9	154 aa		13.58	□□□□□ -0.24
SNX5-210	ENST00000481323	FAM240B	A0A1B0GVZ2	78 aa		13.57	□□□□□ -0.24
SNX5-210	ENST00000481323	CA1	P00915	261 aa	Predicted RBP	13.57	□□□□□ -0.24
SNX5-210	ENST00000481323	MBP	P02686	304 aa	Predicted RBP	13.57	□□□□□ -0.24
SNX5-210	ENST00000481323	H2AFB2	P0C5Z0	115 aa		13.57	□□□□□ -0.24
SNX5-210	ENST00000481323	GATA2	P23769	480 aa	Predicted RBP	13.57	□□□□□ -0.24
SNX5-210	ENST00000481323	NUP62	P37198	522 aa	Predicted RBP	13.57	□□□□□ -0.24
SNX5-210	ENST00000481323	AKR1C1	Q04828	323 aa		13.57	□□□□□ -0.24
SNX5-210	ENST00000481323	ACTL10	Q5JWF8	245 aa		13.57	□□□□□ -0.24
SNX5-210	ENST00000481323	TRPT1	Q86TN4	253 aa	Known RBP	13.57	□□□□□ -0.24
SNX5-210	ENST00000481323	RAB40C	Q96S21	281 aa		13.57	□□□□□ -0.24
SNX5-210	ENST00000481323	RCL1	Q9Y2P8	373 aa	Known RBP	13.57	□□□□□ -0.24
SNX5-210	ENST00000481323	SACS	Q9NZJ4	4579 aa		13.57	□□□□□ -0.24
SNX5-210	ENST00000481323	GIG44	P09565	113 aa	Predicted RBP	13.56	□□□□□ -0.24
SNX5-210	ENST00000481323	METTL15P1	P0C7V9	234 aa		13.56	□□□□□ -0.24
SNX5-210	ENST00000481323	TMEM14EP	Q6UXP3	125 aa		13.56	□□□□□ -0.24
SNX5-210	ENST00000481323	TMEM144	Q7Z5S9	345 aa		13.56	□□□□□ -0.24
SNX5-210	ENST00000481323	GATAD1	Q8WUU5	269 aa		13.56	□□□□□ -0.24
SNX5-210	ENST00000481323	PPP1R14B	Q96C90	147 aa		13.56	□□□□□ -0.24
SNX5-210	ENST00000481323	RARRES2	Q99969	163 aa		13.56	□□□□□ -0.24
SNX5-210	ENST00000481323	SMCO3	A2RU48	225 aa		13.55	□□□□□ -0.24
SNX5-210	ENST00000481323	FAM25E	A8MYX2	175 aa		13.55	□□□□□ -0.24
SNX5-210	ENST00000481323	CFD	P00746	253 aa	Predicted RBP	13.55	□□□□□ -0.24
SNX5-210	ENST00000481323	SNRPD3	P62318	126 aa	Known RBP	13.55	□□□□□ -0.24
SNX5-210	ENST00000481323	ASAH1	Q13510	395 aa		13.55	□□□□□ -0.24
SNX5-210	ENST00000481323	C1orf194	Q5T5A4	169 aa		13.55	□□□□□ -0.24
SNX5-210	ENST00000481323	MZT2B	Q6NZ67	158 aa		13.55	□□□□□ -0.24
SNX5-210	ENST00000481323	GSG1L	Q6UXU4	331 aa		13.55	□□□□□ -0.24
SNX5-210	ENST00000481323	C12orf45	Q8N5I9	185 aa	Predicted RBP	13.55	□□□□□ -0.24
SNX5-210	ENST00000481323	OR11H2	Q8NH07	326 aa		13.55	□□□□□ -0.24
SNX5-210	ENST00000481323	WDR12	Q9GZL7	423 aa	Known RBP	13.55	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms