RNA–Protein interactions for RNA: ENST00000479988.1

CPS1-207, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best)

Gene CPS1, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-207ENST00000479988 C2CD4CQ8TF44 421 aa4.82□□□□□ -1.64
CPS1-207ENST00000479988 NPCDR1Q9BY65 106 aa4.82□□□□□ -1.64
CPS1-207ENST00000479988 PXMP4Q9Y6I8 212 aa4.82□□□□□ -1.64
CPS1-207ENST00000479988 IGHV3-49A0A0A0MS15 119 aa4.82□□□□□ -1.64
CPS1-207ENST00000479988 DNAJC9-AS1A6NH13 148 aa4.82□□□□□ -1.64
CPS1-207ENST00000479988 F5H697 171 aa4.82□□□□□ -1.64
CPS1-207ENST00000479988 PAGE4O60829 102 aa4.82□□□□□ -1.64
CPS1-207ENST00000479988 RPL15P61313 204 aaKnown RBP4.82□□□□□ -1.64
CPS1-207ENST00000479988 SRSF3P84103 164 aaKnown RBP4.82□□□□□ -1.64
CPS1-207ENST00000479988 SPSB3Q6PJ21 355 aa4.82□□□□□ -1.64
CPS1-207ENST00000479988 MRAPQ8TCY5 172 aa4.82□□□□□ -1.64
CPS1-207ENST00000479988 RARRES2Q99969 163 aa4.82□□□□□ -1.64
CPS1-207ENST00000479988 PEF1Q9UBV8 284 aaKnown RBP4.82□□□□□ -1.64
CPS1-207ENST00000479988 MED12LQ86YW9 2145 aa4.82□□□□□ -1.64
CPS1-207ENST00000479988 FBLL1A6NHQ2 334 aaKnown RBP4.81□□□□□ -1.64
CPS1-207ENST00000479988 FAM223BA6NKX1 122 aa4.81□□□□□ -1.64
CPS1-207ENST00000479988 RPL30P62888 115 aaKnown RBP4.81□□□□□ -1.64
CPS1-207ENST00000479988 ICAM4Q14773 271 aa4.81□□□□□ -1.64
CPS1-207ENST00000479988 PSG5Q15238 335 aa4.81□□□□□ -1.64
CPS1-207ENST00000479988 Q6ZRM9 215 aa4.81□□□□□ -1.64
CPS1-207ENST00000479988 FAM223AQ8IWN6 122 aa4.81□□□□□ -1.64
CPS1-207ENST00000479988 C11orf53Q8IXP5 236 aa4.81□□□□□ -1.64
CPS1-207ENST00000479988 ZNF295-AS1Q8N0V1 137 aa4.81□□□□□ -1.64
CPS1-207ENST00000479988 PGPEP1Q9NXJ5 209 aa4.81□□□□□ -1.64
CPS1-207ENST00000479988 GOLT1BQ9Y3E0 138 aa4.81□□□□□ -1.64
CPS1-207ENST00000479988 S4R3C0 116 aa4.81□□□□□ -1.64
CPS1-207ENST00000479988 HELZ2Q9BYK8 2649 aaKnown RBP4.81□□□□□ -1.64
CPS1-207ENST00000479988 A0A0G2JRQ6 117 aa4.81□□□□□ -1.64
CPS1-207ENST00000479988 C15orf61A6NNL5 157 aa4.81□□□□□ -1.64
CPS1-207ENST00000479988 OR11H12B2RN74 326 aa4.81□□□□□ -1.64
CPS1-207ENST00000479988 SNRPEP62304 92 aaKnown RBP4.81□□□□□ -1.64
CPS1-207ENST00000479988 ISOC2Q96AB3 205 aa4.81□□□□□ -1.64
CPS1-207ENST00000479988 ZNF48Q96MX3 618 aaPredicted RBP4.81□□□□□ -1.64
CPS1-207ENST00000479988 C12orf57Q99622 126 aa4.81□□□□□ -1.64
CPS1-207ENST00000479988 ATG101Q9BSB4 218 aa4.81□□□□□ -1.64
CPS1-207ENST00000479988 C1QTNF4Q9BXJ3 329 aa4.81□□□□□ -1.64
CPS1-207ENST00000479988 PRR14LQ5THK1 2151 aa4.81□□□□□ -1.64
CPS1-207ENST00000479988 TMEM50AO95807 157 aa4.81□□□□□ -1.64
CPS1-207ENST00000479988 LINC00869P0C866 280 aa4.81□□□□□ -1.64
CPS1-207ENST00000479988 C15orf32Q32M92 178 aa4.81□□□□□ -1.64
CPS1-207ENST00000479988 FAM78BQ5VT40 261 aa4.81□□□□□ -1.64
CPS1-207ENST00000479988 NEU1Q99519 415 aa4.81□□□□□ -1.64
CPS1-207ENST00000479988 CENPVL3A0A0U1RRI6 287 aa4.81□□□□□ -1.64
CPS1-207ENST00000479988 A0A1B0GW15 77 aa4.81□□□□□ -1.64
CPS1-207ENST00000479988 RAMP3O60896 148 aa4.81□□□□□ -1.64
CPS1-207ENST00000479988 IGKV1-39P01597 117 aa4.81□□□□□ -1.64
CPS1-207ENST00000479988 IGKV3-20P01619 116 aa4.81□□□□□ -1.64
CPS1-207ENST00000479988 IGKV1D-39P04432 117 aa4.81□□□□□ -1.64
CPS1-207ENST00000479988 FABP9Q0Z7S8 132 aa4.81□□□□□ -1.64
CPS1-207ENST00000479988 PRSS8Q16651 343 aa4.81□□□□□ -1.64
CPS1-207ENST00000479988 GATAD1Q8WUU5 269 aa4.81□□□□□ -1.64
CPS1-207ENST00000479988 FRZBQ92765 325 aa4.81□□□□□ -1.64
CPS1-207ENST00000479988 BET1LQ9NYM9 111 aa4.81□□□□□ -1.64
CPS1-207ENST00000479988 SNURFLB1AK76 121 aa4.8□□□□□ -1.64
CPS1-207ENST00000479988 UPK2O00526 184 aa4.8□□□□□ -1.64
CPS1-207ENST00000479988 ADCYAP1P18509 176 aa4.8□□□□□ -1.64
CPS1-207ENST00000479988 GPX4P36969 197 aaPredicted RBP4.8□□□□□ -1.64
CPS1-207ENST00000479988 TMEM144Q7Z5S9 345 aa4.8□□□□□ -1.64
CPS1-207ENST00000479988 OR51G1Q8NGK1 321 aa4.8□□□□□ -1.64
CPS1-207ENST00000479988 TMEM167AQ8TBQ9 72 aa4.8□□□□□ -1.64
CPS1-207ENST00000479988 MRPL32Q9BYC8 188 aaKnown RBP4.8□□□□□ -1.64
CPS1-207ENST00000479988 SDF2L1Q9HCN8 221 aa4.8□□□□□ -1.64
CPS1-207ENST00000479988 FN1P02751 2386 aaKnown RBP4.8□□□□□ -1.64
CPS1-207ENST00000479988 C15orf65H3BRN8 121 aa4.8□□□□□ -1.64
CPS1-207ENST00000479988 LMO4P61968 165 aa4.8□□□□□ -1.64
CPS1-207ENST00000479988 OR11H1Q8NG94 326 aa4.8□□□□□ -1.64
CPS1-207ENST00000479988 TMEM190Q8WZ59 177 aa4.8□□□□□ -1.64
CPS1-207ENST00000479988 NABP2Q9BQ15 211 aa4.8□□□□□ -1.64
CPS1-207ENST00000479988 C11orf1Q9H5F2 150 aa4.8□□□□□ -1.64
CPS1-207ENST00000479988 ARFGEF3Q5TH69 2177 aa4.8□□□□□ -1.64
CPS1-207ENST00000479988 TRBV7-1A0A0A6YYK4 115 aa4.8□□□□□ -1.64
CPS1-207ENST00000479988 OR2T8A6NH00 312 aa4.8□□□□□ -1.64
CPS1-207ENST00000479988 COLCA2A8K830 154 aa4.8□□□□□ -1.64
CPS1-207ENST00000479988 DUSP14O95147 198 aaKnown RBP4.8□□□□□ -1.64
CPS1-207ENST00000479988 HOXB4P17483 251 aaPredicted RBP4.8□□□□□ -1.64
CPS1-207ENST00000479988 RPL29P47914 159 aaKnown RBP4.8□□□□□ -1.64
CPS1-207ENST00000479988 EMP1P54849 157 aa4.8□□□□□ -1.64
CPS1-207ENST00000479988 FAM3BP58499 235 aaPredicted RBP4.8□□□□□ -1.64
CPS1-207ENST00000479988 USF2Q15853 346 aaPredicted RBP4.8□□□□□ -1.64
CPS1-207ENST00000479988 POU2AF1Q16633 256 aa4.8□□□□□ -1.64
CPS1-207ENST00000479988 ZNF562Q6V9R5 426 aa4.8□□□□□ -1.64
CPS1-207ENST00000479988 C1QL4Q86Z23 238 aa4.8□□□□□ -1.64
CPS1-207ENST00000479988 OR4P4Q8NGL7 312 aa4.8□□□□□ -1.64
CPS1-207ENST00000479988 RNASEH2CQ8TDP1 164 aaKnown RBP4.8□□□□□ -1.64
CPS1-207ENST00000479988 NPIPB3Q92617 1050 aa4.8□□□□□ -1.64
CPS1-207ENST00000479988 A0A1W2PPQ1 181 aa4.8□□□□□ -1.64
CPS1-207ENST00000479988 APOC4P55056 127 aa4.8□□□□□ -1.64
CPS1-207ENST00000479988 SYNJ2BPP57105 145 aa4.8□□□□□ -1.64
CPS1-207ENST00000479988 HIST1H1AQ02539 215 aaPredicted RBP4.8□□□□□ -1.64
CPS1-207ENST00000479988 ZNF90Q03938 601 aa4.8□□□□□ -1.64
CPS1-207ENST00000479988 OR10G8Q8NGN5 311 aa4.8□□□□□ -1.64
CPS1-207ENST00000479988 GSX1Q9H4S2 264 aaPredicted RBP4.8□□□□□ -1.64
CPS1-207ENST00000479988 CTSZQ9UBR2 303 aa4.8□□□□□ -1.64
CPS1-207ENST00000479988 KIAA1549Q9HCM3 1950 aa4.79□□□□□ -1.64
CPS1-207ENST00000479988 ZNF98A6NK75 572 aa4.79□□□□□ -1.64
CPS1-207ENST00000479988 CCL24O00175 119 aa4.79□□□□□ -1.64
CPS1-207ENST00000479988 PRCDQ00LT1 54 aa4.79□□□□□ -1.64
CPS1-207ENST00000479988 CDSNQ15517 529 aa4.79□□□□□ -1.64
CPS1-207ENST00000479988 C5orf24Q7Z6I8 188 aa4.79□□□□□ -1.64
CPS1-207ENST00000479988 TMEM18Q96B42 140 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms