RNA–Protein interactions for RNA: ENST00000479625.1

GPNMB-211, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 788 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-211ENST00000479625 FOXI2Q6ZQN5 318 aa6.72□□□□□ -1.33
GPNMB-211ENST00000479625 PRSS48Q7RTY5 328 aa6.72□□□□□ -1.33
GPNMB-211ENST00000479625 KRTAP4-2Q9BYR5 136 aa6.72□□□□□ -1.33
GPNMB-211ENST00000479625 MAGT1Q9H0U3 335 aa6.72□□□□□ -1.33
GPNMB-211ENST00000479625 SEPSECSQ9HD40 501 aaKnown RBP6.72□□□□□ -1.33
GPNMB-211ENST00000479625 IFT46Q9NQC8 304 aa6.72□□□□□ -1.33
GPNMB-211ENST00000479625 BUB3O43684 328 aa6.71□□□□□ -1.34
GPNMB-211ENST00000479625 IGKV1-5P01602 117 aa6.71□□□□□ -1.34
GPNMB-211ENST00000479625 ETV6P41212 452 aa6.71□□□□□ -1.34
GPNMB-211ENST00000479625 RND2P52198 227 aa6.71□□□□□ -1.34
GPNMB-211ENST00000479625 LINC00315P59091 139 aa6.71□□□□□ -1.34
GPNMB-211ENST00000479625 KRTAP10-1P60331 282 aa6.71□□□□□ -1.34
GPNMB-211ENST00000479625 PSG9Q00887 426 aa6.71□□□□□ -1.34
GPNMB-211ENST00000479625 FAM78BQ5VT40 261 aa6.71□□□□□ -1.34
GPNMB-211ENST00000479625 DHRS11Q6UWP2 260 aa6.71□□□□□ -1.34
GPNMB-211ENST00000479625 Q6ZRN7 208 aaPredicted RBP6.71□□□□□ -1.34
GPNMB-211ENST00000479625 COQ8AQ8NI60 647 aa6.71□□□□□ -1.34
GPNMB-211ENST00000479625 GPR146Q96CH1 333 aa6.71□□□□□ -1.34
GPNMB-211ENST00000479625 C17orf77Q96MU5 243 aa6.71□□□□□ -1.34
GPNMB-211ENST00000479625 TMEM208Q9BTX3 173 aa6.71□□□□□ -1.34
GPNMB-211ENST00000479625 SCPEP1Q9HB40 452 aa6.71□□□□□ -1.34
GPNMB-211ENST00000479625 TXNL4BQ9NX01 149 aaKnown RBP6.71□□□□□ -1.34
GPNMB-211ENST00000479625 ZNF586Q9NXT0 402 aa6.71□□□□□ -1.34
GPNMB-211ENST00000479625 A0A0B4J293 547 aa6.7□□□□□ -1.34
GPNMB-211ENST00000479625 PLAC8L1A1L4L8 177 aa6.7□□□□□ -1.34
GPNMB-211ENST00000479625 LYRM9A8MSI8 78 aa6.7□□□□□ -1.34
GPNMB-211ENST00000479625 INS-IGF2F8WCM5 200 aa6.7□□□□□ -1.34
GPNMB-211ENST00000479625 M0QYG6 137 aa6.7□□□□□ -1.34
GPNMB-211ENST00000479625 SOCS3O14543 225 aa6.7□□□□□ -1.34
GPNMB-211ENST00000479625 SCGB2A1O75556 95 aa6.7□□□□□ -1.34
GPNMB-211ENST00000479625 ATP5G1P05496 136 aa6.7□□□□□ -1.34
GPNMB-211ENST00000479625 CLEC2LP0C7M8 214 aa6.7□□□□□ -1.34
GPNMB-211ENST00000479625 OR10J1P30954 320 aa6.7□□□□□ -1.34
GPNMB-211ENST00000479625 CBX5P45973 191 aa6.7□□□□□ -1.34
GPNMB-211ENST00000479625 ATP5G3P48201 142 aa6.7□□□□□ -1.34
GPNMB-211ENST00000479625 MXD1Q05195 221 aa6.7□□□□□ -1.34
GPNMB-211ENST00000479625 OR1S2Q8NGQ3 325 aa6.7□□□□□ -1.34
GPNMB-211ENST00000479625 OR5H2Q8NGV7 314 aa6.7□□□□□ -1.34
GPNMB-211ENST00000479625 Q8WTZ3 238 aa6.7□□□□□ -1.34
GPNMB-211ENST00000479625 CLUHP3Q96NS8 147 aa6.7□□□□□ -1.34
GPNMB-211ENST00000479625 TRAV30A0A087WSZ9 112 aa6.69□□□□□ -1.34
GPNMB-211ENST00000479625 P0C879 139 aa6.69□□□□□ -1.34
GPNMB-211ENST00000479625 DNAH10OSP0CZ25 163 aa6.69□□□□□ -1.34
GPNMB-211ENST00000479625 ELK1P19419 428 aa6.69□□□□□ -1.34
GPNMB-211ENST00000479625 AZU1P20160 251 aa6.69□□□□□ -1.34
GPNMB-211ENST00000479625 PSMB3P49720 205 aa6.69□□□□□ -1.34
GPNMB-211ENST00000479625 AKR1C2P52895 323 aa6.69□□□□□ -1.34
GPNMB-211ENST00000479625 SUB1P53999 127 aaKnown RBP eCLIP6.69□□□□□ -1.34
GPNMB-211ENST00000479625 AQP4P55087 323 aa6.69□□□□□ -1.34
GPNMB-211ENST00000479625 PAX9P55771 341 aa6.69□□□□□ -1.34
GPNMB-211ENST00000479625 BSXQ3C1V8 233 aa6.69□□□□□ -1.34
GPNMB-211ENST00000479625 TMEM69Q5SWH9 247 aa6.69□□□□□ -1.34
GPNMB-211ENST00000479625 IDNKQ5T6J7 187 aa6.69□□□□□ -1.34
GPNMB-211ENST00000479625 PRSS54Q6PEW0 395 aa6.69□□□□□ -1.34
GPNMB-211ENST00000479625 AMTNQ6UX39 209 aa6.69□□□□□ -1.34
GPNMB-211ENST00000479625 SYT8Q8NBV8 401 aa6.69□□□□□ -1.34
GPNMB-211ENST00000479625 OR51G1Q8NGK1 321 aa6.69□□□□□ -1.34
GPNMB-211ENST00000479625 OR4C16Q8NGL9 310 aa6.69□□□□□ -1.34
GPNMB-211ENST00000479625 OR6F1Q8NGZ6 308 aa6.69□□□□□ -1.34
GPNMB-211ENST00000479625 IGF2BP2-AS1Q96M15 143 aa6.69□□□□□ -1.34
GPNMB-211ENST00000479625 FAM212BQ9NTI7 297 aaPredicted RBP6.69□□□□□ -1.34
GPNMB-211ENST00000479625 PTTG2Q9NZH5 202 aa6.69□□□□□ -1.34
GPNMB-211ENST00000479625 ANAPC10Q9UM13 185 aa6.69□□□□□ -1.34
GPNMB-211ENST00000479625 A0A0A6YYH2 397 aa6.68□□□□□ -1.34
GPNMB-211ENST00000479625 A0A0G2JRQ6 117 aa6.68□□□□□ -1.34
GPNMB-211ENST00000479625 A0A0J9YX75 114 aa6.68□□□□□ -1.34
GPNMB-211ENST00000479625 A6NJ64 397 aa6.68□□□□□ -1.34
GPNMB-211ENST00000479625 M0R2Z0 102 aa6.68□□□□□ -1.34
GPNMB-211ENST00000479625 NXPH3O95157 252 aa6.68□□□□□ -1.34
GPNMB-211ENST00000479625 HRH1P35367 487 aa6.68□□□□□ -1.34
GPNMB-211ENST00000479625 RPL5P46777 297 aaKnown RBP6.68□□□□□ -1.34
GPNMB-211ENST00000479625 TAS2R20P59543 309 aa6.68□□□□□ -1.34
GPNMB-211ENST00000479625 YPEL3P61236 119 aaPredicted RBP6.68□□□□□ -1.34
GPNMB-211ENST00000479625 ICAM4Q14773 271 aa6.68□□□□□ -1.34
GPNMB-211ENST00000479625 SPINK13Q1W4C9 94 aa6.68□□□□□ -1.34
GPNMB-211ENST00000479625 Q6ZSN1 163 aa6.68□□□□□ -1.34
GPNMB-211ENST00000479625 FCGR1BQ92637 280 aa6.68□□□□□ -1.34
GPNMB-211ENST00000479625 PDCD10Q9BUL8 212 aa6.68□□□□□ -1.34
GPNMB-211ENST00000479625 KRTAP4-11Q9BYQ6 195 aa6.68□□□□□ -1.34
GPNMB-211ENST00000479625 KLK11Q9UBX7 282 aa6.68□□□□□ -1.34
GPNMB-211ENST00000479625 A0A0J9YY99 117 aa6.67□□□□□ -1.34
GPNMB-211ENST00000479625 A0A1W2PPQ1 181 aa6.67□□□□□ -1.34
GPNMB-211ENST00000479625 EBAG9O00559 213 aa6.67□□□□□ -1.34
GPNMB-211ENST00000479625 CRXO43186 299 aaPredicted RBP6.67□□□□□ -1.34
GPNMB-211ENST00000479625 GSTZ1O43708 216 aaPredicted RBP6.67□□□□□ -1.34
GPNMB-211ENST00000479625 TOMM40O96008 361 aa6.67□□□□□ -1.34
GPNMB-211ENST00000479625 PSG1P11464 419 aa6.67□□□□□ -1.34
GPNMB-211ENST00000479625 HLA-DMAP28067 261 aa6.67□□□□□ -1.34
GPNMB-211ENST00000479625 SDC2P34741 201 aa6.67□□□□□ -1.34
GPNMB-211ENST00000479625 ID1P41134 155 aa6.67□□□□□ -1.34
GPNMB-211ENST00000479625 HSPA13P48723 471 aa6.67□□□□□ -1.34
GPNMB-211ENST00000479625 TAS2R46P59540 309 aa6.67□□□□□ -1.34
GPNMB-211ENST00000479625 ESRGQ1W209 222 aa6.67□□□□□ -1.34
GPNMB-211ENST00000479625 EBLN2Q6P2I7 272 aa6.67□□□□□ -1.34
GPNMB-211ENST00000479625 BAP18Q8IXM2 172 aa6.67□□□□□ -1.34
GPNMB-211ENST00000479625 RNF125Q96EQ8 232 aa6.67□□□□□ -1.34
GPNMB-211ENST00000479625 ACY3Q96HD9 319 aa6.67□□□□□ -1.34
GPNMB-211ENST00000479625 TP53RKQ96S44 253 aa6.67□□□□□ -1.34
GPNMB-211ENST00000479625 UPK3BQ9BT76 320 aa6.67□□□□□ -1.34
GPNMB-211ENST00000479625 PBDC1Q9BVG4 233 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms