RNA–Protein interactions for RNA: ENST00000479309.6

SPC25-204, Transcript of SPC25, NDC80 kinetochore complex component, humanhuman

TSL 5

Gene SPC25, Length 510 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25-204ENST00000479309 RIMBP3Q9UFD9 1639 aa0.38□□□□□ -2.35
SPC25-204ENST00000479309 HAND1O96004 215 aa0.38□□□□□ -2.35
SPC25-204ENST00000479309 SMIM17P0DL12 118 aa0.38□□□□□ -2.35
SPC25-204ENST00000479309 CDKN2CP42773 168 aa0.38□□□□□ -2.35
SPC25-204ENST00000479309 LSM6P62312 80 aaKnown RBP0.38□□□□□ -2.35
SPC25-204ENST00000479309 DEFB113Q30KQ7 82 aa0.38□□□□□ -2.35
SPC25-204ENST00000479309 CLECL1Q8IZS7 167 aa0.38□□□□□ -2.35
SPC25-204ENST00000479309 SLC30A7Q8NEW0 376 aa0.38□□□□□ -2.35
SPC25-204ENST00000479309 OR52L1Q8NGH7 329 aa0.38□□□□□ -2.35
SPC25-204ENST00000479309 TMEM254Q8TBM7 123 aa0.38□□□□□ -2.35
SPC25-204ENST00000479309 PATE1Q8WXA2 126 aa0.38□□□□□ -2.35
SPC25-204ENST00000479309 ADAT3Q96EY9 351 aaPredicted RBP0.38□□□□□ -2.35
SPC25-204ENST00000479309 BTF3L4Q96K17 158 aa0.38□□□□□ -2.35
SPC25-204ENST00000479309 TMEM133Q9H2Q1 129 aa0.38□□□□□ -2.35
SPC25-204ENST00000479309 BCL2L10Q9HD36 194 aa0.38□□□□□ -2.35
SPC25-204ENST00000479309 UBAP1Q9NZ09 502 aa0.38□□□□□ -2.35
SPC25-204ENST00000479309 IDI2-AS1Q9NZ38 188 aa0.38□□□□□ -2.35
SPC25-204ENST00000479309 UTP11Q9Y3A2 253 aaKnown RBP0.38□□□□□ -2.35
SPC25-204ENST00000479309 PRELID3BQ9Y3B1 194 aa0.38□□□□□ -2.35
SPC25-204ENST00000479309 FMN1Q68DA7 1419 aa0.38□□□□□ -2.35
SPC25-204ENST00000479309 ZNF106Q9H2Y7 1883 aaKnown RBP0.37□□□□□ -2.35
SPC25-204ENST00000479309 KIF1BO60333 1816 aa0.37□□□□□ -2.35
SPC25-204ENST00000479309 TRGV10A0A0A0MS01 117 aa0.37□□□□□ -2.35
SPC25-204ENST00000479309 TMEM114B3SHH9 223 aa0.37□□□□□ -2.35
SPC25-204ENST00000479309 DNAL4O96015 105 aa0.37□□□□□ -2.35
SPC25-204ENST00000479309 DHFRP00374 187 aa0.37□□□□□ -2.35
SPC25-204ENST00000479309 ZNF25P17030 456 aaPredicted RBP0.37□□□□□ -2.35
SPC25-204ENST00000479309 RNASE4P34096 147 aaKnown RBP0.37□□□□□ -2.35
SPC25-204ENST00000479309 SRP14P37108 136 aaKnown RBP0.37□□□□□ -2.35
SPC25-204ENST00000479309 EIF5AP63241 154 aaKnown RBP0.37□□□□□ -2.35
SPC25-204ENST00000479309 CCL7P80098 99 aa0.37□□□□□ -2.35
SPC25-204ENST00000479309 SPA17Q15506 151 aa0.37□□□□□ -2.35
SPC25-204ENST00000479309 ST6GALNAC3Q8NDV1 305 aa0.37□□□□□ -2.35
SPC25-204ENST00000479309 SLC25A40Q8TBP6 338 aa0.37□□□□□ -2.35
SPC25-204ENST00000479309 SLAMF6Q96DU3 332 aa0.37□□□□□ -2.35
SPC25-204ENST00000479309 RNASE7Q9H1E1 156 aaKnown RBP0.37□□□□□ -2.35
SPC25-204ENST00000479309 TLNRD1Q9H1K6 362 aa0.37□□□□□ -2.35
SPC25-204ENST00000479309 UQCC1Q9NVA1 299 aa0.37□□□□□ -2.35
SPC25-204ENST00000479309 SLC22A13Q9Y226 551 aa0.37□□□□□ -2.35
SPC25-204ENST00000479309 ARHGEF28Q8N1W1 1705 aaKnown RBP0.37□□□□□ -2.35
SPC25-204ENST00000479309 MCM3APO60318 1980 aa0.37□□□□□ -2.35
SPC25-204ENST00000479309 CCDC144AA2RUR9 1427 aa0.37□□□□□ -2.35
SPC25-204ENST00000479309 CEP192Q8TEP8 1941 aa0.36□□□□□ -2.35
SPC25-204ENST00000479309 TRBV6-4A0A1B0GX49 114 aa0.36□□□□□ -2.35
SPC25-204ENST00000479309 A0A1W2PPM0 123 aa0.36□□□□□ -2.35
SPC25-204ENST00000479309 TCRBV4S1A1TA0A5B7 111 aa0.36□□□□□ -2.35
SPC25-204ENST00000479309 NCR3O14931 201 aa0.36□□□□□ -2.35
SPC25-204ENST00000479309 CCL16O15467 120 aa0.36□□□□□ -2.35
SPC25-204ENST00000479309 TIMM17BO60830 172 aa0.36□□□□□ -2.35
SPC25-204ENST00000479309 GADD45GO95257 159 aa0.36□□□□□ -2.35
SPC25-204ENST00000479309 ERP29P30040 261 aaKnown RBP0.36□□□□□ -2.35
SPC25-204ENST00000479309 PIGPP57054 158 aa0.36□□□□□ -2.35
SPC25-204ENST00000479309 DYNLT1P63172 113 aa0.36□□□□□ -2.35
SPC25-204ENST00000479309 PSG9Q00887 426 aa0.36□□□□□ -2.35
SPC25-204ENST00000479309 KRR1Q13601 381 aaKnown RBP0.36□□□□□ -2.35
SPC25-204ENST00000479309 BCL2L15Q5TBC7 163 aa0.36□□□□□ -2.35
SPC25-204ENST00000479309 C2orf82Q6UX34 121 aa0.36□□□□□ -2.35
SPC25-204ENST00000479309 LINC00322Q6ZN03 302 aaPredicted RBP0.36□□□□□ -2.35
SPC25-204ENST00000479309 MED12LQ86YW9 2145 aa0.36□□□□□ -2.35
SPC25-204ENST00000479309 Q8N6K4 173 aa0.36□□□□□ -2.35
SPC25-204ENST00000479309 PLPP5Q8NEB5 264 aa0.36□□□□□ -2.35
SPC25-204ENST00000479309 GNPDA2Q8TDQ7 276 aa0.36□□□□□ -2.35
SPC25-204ENST00000479309 YPEL2Q96QA6 119 aa0.36□□□□□ -2.35
SPC25-204ENST00000479309 GPER1Q99527 375 aa0.36□□□□□ -2.35
SPC25-204ENST00000479309 PRADC1Q9BSG0 188 aa0.36□□□□□ -2.35
SPC25-204ENST00000479309 TMEM70Q9BUB7 260 aa0.36□□□□□ -2.35
SPC25-204ENST00000479309 KIFC1Q9BW19 673 aa0.36□□□□□ -2.35
SPC25-204ENST00000479309 NMNAT1Q9HAN9 279 aaPredicted RBP0.36□□□□□ -2.35
SPC25-204ENST00000479309 PARVBQ9HBI1 364 aa0.36□□□□□ -2.35
SPC25-204ENST00000479309 EML6Q6ZMW3 1958 aa0.36□□□□□ -2.35
SPC25-204ENST00000479309 RP1P56715 2156 aa0.35□□□□□ -2.35
SPC25-204ENST00000479309 PLXND1Q9Y4D7 1925 aa0.35□□□□□ -2.35
SPC25-204ENST00000479309 TRBV19A0A075B6N1 114 aa0.35□□□□□ -2.35
SPC25-204ENST00000479309 TRAV4A0A0B4J268 109 aa0.35□□□□□ -2.35
SPC25-204ENST00000479309 CCL25O15444 150 aa0.35□□□□□ -2.35
SPC25-204ENST00000479309 OR7C1O76099 320 aaPredicted RBP0.35□□□□□ -2.35
SPC25-204ENST00000479309 SRIP30626 198 aa0.35□□□□□ -2.35
SPC25-204ENST00000479309 MYL5Q02045 173 aa0.35□□□□□ -2.35
SPC25-204ENST00000479309 LIN52Q52LA3 116 aa0.35□□□□□ -2.35
SPC25-204ENST00000479309 AKIRIN2Q53H80 203 aa0.35□□□□□ -2.35
SPC25-204ENST00000479309 C22orf39Q6P5X5 142 aa0.35□□□□□ -2.35
SPC25-204ENST00000479309 MNS1Q8NEH6 495 aa0.35□□□□□ -2.35
SPC25-204ENST00000479309 OR2T35Q8NGX2 323 aa0.35□□□□□ -2.35
SPC25-204ENST00000479309 TP53RKQ96S44 253 aa0.35□□□□□ -2.35
SPC25-204ENST00000479309 SIGMAR1Q99720 223 aa0.35□□□□□ -2.35
SPC25-204ENST00000479309 UCK1Q9HA47 277 aa0.35□□□□□ -2.35
SPC25-204ENST00000479309 ORMDL1Q9P0S3 153 aa0.35□□□□□ -2.35
SPC25-204ENST00000479309 TMEM14CQ9P0S9 112 aa0.35□□□□□ -2.35
SPC25-204ENST00000479309 AHNAKQ09666 5890 aaKnown RBP0.35□□□□□ -2.35
SPC25-204ENST00000479309 ZFYVE9O95405 1425 aa0.35□□□□□ -2.35
SPC25-204ENST00000479309 COL1A1P02452 1464 aaPredicted RBP0.35□□□□□ -2.35
SPC25-204ENST00000479309 ARHGEF11O15085 1522 aa0.34□□□□□ -2.35
SPC25-204ENST00000479309 A8MWV9 139 aa0.34□□□□□ -2.36
SPC25-204ENST00000479309 NDUFB3O43676 98 aa0.34□□□□□ -2.36
SPC25-204ENST00000479309 DEFA3P59666 94 aa0.34□□□□□ -2.36
SPC25-204ENST00000479309 MYL6P60660 151 aa0.34□□□□□ -2.36
SPC25-204ENST00000479309 RRN3P1Q2M238 152 aa0.34□□□□□ -2.36
SPC25-204ENST00000479309 SPRNQ5BIV9 151 aa0.34□□□□□ -2.36
SPC25-204ENST00000479309 C4orf22Q6V702 233 aa0.34□□□□□ -2.36
SPC25-204ENST00000479309 GKN2Q86XP6 184 aa0.34□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms