RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 ALKAL2Q6UX46 152 aa5.16□□□□□ -1.58
USP48-208ENST00000479177 LURAP1LQ8IV03 231 aa5.16□□□□□ -1.58
USP48-208ENST00000479177 FAM223AQ8IWN6 122 aa5.16□□□□□ -1.58
USP48-208ENST00000479177 NECAP1Q8NC96 275 aa5.16□□□□□ -1.58
USP48-208ENST00000479177 ZNF680Q8NEM1 530 aa5.16□□□□□ -1.58
USP48-208ENST00000479177 OR4X1Q8NH49 305 aa5.16□□□□□ -1.58
USP48-208ENST00000479177 SCGB1C1Q8TD33 95 aa5.16□□□□□ -1.58
USP48-208ENST00000479177 VN1R17PQ8TDU5 208 aa5.16□□□□□ -1.58
USP48-208ENST00000479177 SCARB1Q8WTV0 552 aa5.16□□□□□ -1.58
USP48-208ENST00000479177 TMED6Q8WW62 240 aa5.16□□□□□ -1.58
USP48-208ENST00000479177 NPIPB3Q92617 1050 aa5.16□□□□□ -1.58
USP48-208ENST00000479177 GNPNAT1Q96EK6 184 aaPredicted RBP5.16□□□□□ -1.58
USP48-208ENST00000479177 ACY3Q96HD9 319 aa5.16□□□□□ -1.58
USP48-208ENST00000479177 MGST2Q99735 147 aa5.16□□□□□ -1.58
USP48-208ENST00000479177 PSMG3Q9BT73 122 aaPredicted RBP5.16□□□□□ -1.58
USP48-208ENST00000479177 RSG1Q9BU20 258 aa5.16□□□□□ -1.58
USP48-208ENST00000479177 GGTLC1Q9BX51 225 aa5.16□□□□□ -1.58
USP48-208ENST00000479177 ZNF355PQ9NSJ1 428 aa5.16□□□□□ -1.58
USP48-208ENST00000479177 C21orf62Q9NYP8 219 aa5.16□□□□□ -1.58
USP48-208ENST00000479177 THYN1Q9P016 225 aa5.16□□□□□ -1.58
USP48-208ENST00000479177 TIMM9Q9Y5J7 89 aa5.16□□□□□ -1.58
USP48-208ENST00000479177 RFNGQ9Y644 331 aa5.16□□□□□ -1.58
USP48-208ENST00000479177 STAB1Q9NY15 2570 aa5.15□□□□□ -1.58
USP48-208ENST00000479177 WNK1Q9H4A3 2382 aa5.15□□□□□ -1.58
USP48-208ENST00000479177 COL6A5A8TX70 2615 aa5.15□□□□□ -1.58
USP48-208ENST00000479177 PSMB11A5LHX3 300 aa5.15□□□□□ -1.59
USP48-208ENST00000479177 AGPAT2O15120 278 aa5.15□□□□□ -1.59
USP48-208ENST00000479177 CLN5O75503 358 aa5.15□□□□□ -1.59
USP48-208ENST00000479177 NDUFA7O95182 113 aa5.15□□□□□ -1.59
USP48-208ENST00000479177 IFNA7P01567 189 aa5.15□□□□□ -1.59
USP48-208ENST00000479177 TRGV3P03979 118 aa5.15□□□□□ -1.59
USP48-208ENST00000479177 SEC11BP0C7V7 166 aa5.15□□□□□ -1.59
USP48-208ENST00000479177 IGLC1P0CG04 106 aa5.15□□□□□ -1.59
USP48-208ENST00000479177 PF4V1P10720 104 aa5.15□□□□□ -1.59
USP48-208ENST00000479177 PSMB8P28062 276 aa5.15□□□□□ -1.59
USP48-208ENST00000479177 FCGR2BP31994 310 aaPredicted RBP5.15□□□□□ -1.59
USP48-208ENST00000479177 CAMLGP49069 296 aa5.15□□□□□ -1.59
USP48-208ENST00000479177 TPPP2P59282 170 aa5.15□□□□□ -1.59
USP48-208ENST00000479177 FAM74A1Q5RGS3 127 aa5.15□□□□□ -1.59
USP48-208ENST00000479177 EIF5AL1Q6IS14 154 aaKnown RBP5.15□□□□□ -1.59
USP48-208ENST00000479177 ACSM6Q6P461 480 aa5.15□□□□□ -1.59
USP48-208ENST00000479177 C10orf99Q6UWK7 81 aa5.15□□□□□ -1.59
USP48-208ENST00000479177 ZNF767PQ75MW2 155 aa5.15□□□□□ -1.59
USP48-208ENST00000479177 CENPVQ7Z7K6 275 aaPredicted RBP5.15□□□□□ -1.59
USP48-208ENST00000479177 RNF152Q8N8N0 203 aa5.15□□□□□ -1.59
USP48-208ENST00000479177 OR2G3Q8NGZ4 309 aa5.15□□□□□ -1.59
USP48-208ENST00000479177 ZNF502Q8TBZ5 544 aa5.15□□□□□ -1.59
USP48-208ENST00000479177 MYOZ3Q8TDC0 251 aa5.15□□□□□ -1.59
USP48-208ENST00000479177 WIPF2Q8TF74 440 aaPredicted RBP5.15□□□□□ -1.59
USP48-208ENST00000479177 MS4A10Q96PG2 267 aa5.15□□□□□ -1.59
USP48-208ENST00000479177 TRGV9Q99603 122 aa5.15□□□□□ -1.59
USP48-208ENST00000479177 SLC25A32Q9H2D1 315 aa5.15□□□□□ -1.59
USP48-208ENST00000479177 KLK15Q9H2R5 256 aa5.15□□□□□ -1.59
USP48-208ENST00000479177 C16orf95Q9H693 158 aa5.15□□□□□ -1.59
USP48-208ENST00000479177 NPVFQ9HCQ7 196 aa5.15□□□□□ -1.59
USP48-208ENST00000479177 KCNIP2Q9NS61 270 aa5.15□□□□□ -1.59
USP48-208ENST00000479177 C11orf21Q9P2W6 132 aa5.15□□□□□ -1.59
USP48-208ENST00000479177 S4R3C0 116 aa5.15□□□□□ -1.59
USP48-208ENST00000479177 CUBNO60494 3623 aa5.14□□□□□ -1.59
USP48-208ENST00000479177 TCRBV4S1A1TA0A5B7 111 aa5.14□□□□□ -1.59
USP48-208ENST00000479177 C17orf112F2Z3M2 114 aa5.14□□□□□ -1.59
USP48-208ENST00000479177 IGKV1-17P01599 117 aa5.14□□□□□ -1.59
USP48-208ENST00000479177 IGHV3-23P01764 117 aa5.14□□□□□ -1.59
USP48-208ENST00000479177 CRYBA1P05813 215 aa5.14□□□□□ -1.59
USP48-208ENST00000479177 ELANEP08246 267 aa5.14□□□□□ -1.59
USP48-208ENST00000479177 OR10J1P30954 320 aa5.14□□□□□ -1.59
USP48-208ENST00000479177 RPL29P47914 159 aaKnown RBP5.14□□□□□ -1.59
USP48-208ENST00000479177 NPBWR1P48145 328 aa5.14□□□□□ -1.59
USP48-208ENST00000479177 MFAP4P55083 255 aa5.14□□□□□ -1.59
USP48-208ENST00000479177 ELLP55199 621 aaPredicted RBP5.14□□□□□ -1.59
USP48-208ENST00000479177 SLC35B1P78383 322 aa5.14□□□□□ -1.59
USP48-208ENST00000479177 ATP5G2Q06055 141 aa5.14□□□□□ -1.59
USP48-208ENST00000479177 KIAA0141Q14154 515 aaPredicted RBP5.14□□□□□ -1.59
USP48-208ENST00000479177 MIC13Q5XKP0 118 aa5.14□□□□□ -1.59
USP48-208ENST00000479177 TMEM182Q6ZP80 229 aaPredicted RBP5.14□□□□□ -1.59
USP48-208ENST00000479177 CYP2G1PQ6ZSU1 146 aa5.14□□□□□ -1.59
USP48-208ENST00000479177 ZNF329Q86UD4 541 aa5.14□□□□□ -1.59
USP48-208ENST00000479177 ZNF709Q8N972 641 aa5.14□□□□□ -1.59
USP48-208ENST00000479177 EEF1AKMT3Q96AZ1 226 aa5.14□□□□□ -1.59
USP48-208ENST00000479177 USMG5Q96IX5 58 aa5.14□□□□□ -1.59
USP48-208ENST00000479177 CXorf58Q96LI9 332 aa5.14□□□□□ -1.59
USP48-208ENST00000479177 ATP6V0BQ99437 205 aa5.14□□□□□ -1.59
USP48-208ENST00000479177 UBQLN2Q9UHD9 624 aa5.14□□□□□ -1.59
USP48-208ENST00000479177 SLC45A2Q9UMX9 530 aa5.14□□□□□ -1.59
USP48-208ENST00000479177 PXMP4Q9Y6I8 212 aa5.14□□□□□ -1.59
USP48-208ENST00000479177 TRBV7-1A0A0A6YYK4 115 aa5.13□□□□□ -1.59
USP48-208ENST00000479177 OR2T8A6NH00 312 aa5.13□□□□□ -1.59
USP48-208ENST00000479177 ZFP92A6NM28 416 aa5.13□□□□□ -1.59
USP48-208ENST00000479177 UMAD1C9J7I0 102 aa5.13□□□□□ -1.59
USP48-208ENST00000479177 YIF1AO95070 293 aa5.13□□□□□ -1.59
USP48-208ENST00000479177 LINC00869P0C866 280 aa5.13□□□□□ -1.59
USP48-208ENST00000479177 GPR183P32249 361 aa5.13□□□□□ -1.59
USP48-208ENST00000479177 SULT1A2P50226 295 aa5.13□□□□□ -1.59
USP48-208ENST00000479177 RAB9AP51151 201 aa5.13□□□□□ -1.59
USP48-208ENST00000479177 RAB2AP61019 212 aa5.13□□□□□ -1.59
USP48-208ENST00000479177 B2MP61769 119 aa5.13□□□□□ -1.59
USP48-208ENST00000479177 SELENOTP62341 195 aa5.13□□□□□ -1.59
USP48-208ENST00000479177 SERF2P84101 59 aa5.13□□□□□ -1.59
USP48-208ENST00000479177 ZNF90Q03938 601 aa5.13□□□□□ -1.59
USP48-208ENST00000479177 RAB31Q13636 194 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms