RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 RNF125Q96EQ8 232 aa9.52□□□□□ -0.89
VCL-205ENST00000478896 LINC00052Q96N35 136 aa9.52□□□□□ -0.89
VCL-205ENST00000478896 CACFD1Q9UGQ2 172 aa9.52□□□□□ -0.89
VCL-205ENST00000478896 PFDN2Q9UHV9 154 aa9.52□□□□□ -0.89
VCL-205ENST00000478896 HLA-DRB4X5D2U9 266 aa9.52□□□□□ -0.89
VCL-205ENST00000478896 TMEM189A5PLL7 270 aa9.51□□□□□ -0.89
VCL-205ENST00000478896 PRSS29PA6NIE9 313 aa9.51□□□□□ -0.89
VCL-205ENST00000478896 ZFP92A6NM28 416 aa9.51□□□□□ -0.89
VCL-205ENST00000478896 SPART-AS1P0CW21 52 aa9.51□□□□□ -0.89
VCL-205ENST00000478896 AKAIN1P0CW23 69 aa9.51□□□□□ -0.89
VCL-205ENST00000478896 NKX2-1P43699 371 aaPredicted RBP9.51□□□□□ -0.89
VCL-205ENST00000478896 FXYD7P58549 80 aa9.51□□□□□ -0.89
VCL-205ENST00000478896 COQ8AQ8NI60 647 aa9.51□□□□□ -0.89
VCL-205ENST00000478896 TMEM170AQ8WVE7 144 aa9.51□□□□□ -0.89
VCL-205ENST00000478896 SCRT1Q9BWW7 348 aa9.51□□□□□ -0.89
VCL-205ENST00000478896 VPS13DQ5THJ4 4388 aa9.5□□□□□ -0.89
VCL-205ENST00000478896 ID1P41134 155 aa9.5□□□□□ -0.89
VCL-205ENST00000478896 CTF1Q16619 201 aa9.5□□□□□ -0.89
VCL-205ENST00000478896 NMSQ5H8A3 153 aa9.5□□□□□ -0.89
VCL-205ENST00000478896 GDF5OSQ5U4N7 250 aa9.5□□□□□ -0.89
VCL-205ENST00000478896 ZNF705AQ6ZN79 300 aaPredicted RBP9.5□□□□□ -0.89
VCL-205ENST00000478896 OR4B1Q8NGF8 309 aa9.5□□□□□ -0.89
VCL-205ENST00000478896 OR4C16Q8NGL9 310 aa9.5□□□□□ -0.89
VCL-205ENST00000478896 DTD1Q8TEA8 209 aa9.5□□□□□ -0.89
VCL-205ENST00000478896 SMIM4Q8WVI0 70 aa9.5□□□□□ -0.89
VCL-205ENST00000478896 NEU1Q99519 415 aa9.5□□□□□ -0.89
VCL-205ENST00000478896 PRRT1Q99946 306 aa9.5□□□□□ -0.89
VCL-205ENST00000478896 PRR13Q9NZ81 148 aa9.5□□□□□ -0.89
VCL-205ENST00000478896 GPR132Q9UNW8 380 aa9.5□□□□□ -0.89
VCL-205ENST00000478896 KCNIP3Q9Y2W7 256 aa9.5□□□□□ -0.89
VCL-205ENST00000478896 U3KQ87 197 aa9.5□□□□□ -0.89
VCL-205ENST00000478896 TEX48A0A1B0GUV7 120 aa9.49□□□□□ -0.89
VCL-205ENST00000478896 SMIM9A6NGZ8 99 aa9.49□□□□□ -0.89
VCL-205ENST00000478896 IFNA21P01568 189 aa9.49□□□□□ -0.89
VCL-205ENST00000478896 LYZP61626 148 aa9.49□□□□□ -0.89
VCL-205ENST00000478896 KLF9Q13886 244 aaPredicted RBP9.49□□□□□ -0.89
VCL-205ENST00000478896 IL18Q14116 193 aa9.49□□□□□ -0.89
VCL-205ENST00000478896 OR8G2PQ6IF36 304 aa9.49□□□□□ -0.89
VCL-205ENST00000478896 FOXI2Q6ZQN5 318 aa9.49□□□□□ -0.89
VCL-205ENST00000478896 LGI3Q8N145 548 aa9.49□□□□□ -0.89
VCL-205ENST00000478896 IL22RA2Q969J5 263 aa9.49□□□□□ -0.89
VCL-205ENST00000478896 PPP1R14BQ96C90 147 aa9.49□□□□□ -0.89
VCL-205ENST00000478896 SLC35E1Q96K37 410 aa9.49□□□□□ -0.89
VCL-205ENST00000478896 MIXL1Q9H2W2 232 aa9.49□□□□□ -0.89
VCL-205ENST00000478896 SAV1Q9H4B6 383 aaPredicted RBP9.49□□□□□ -0.89
VCL-205ENST00000478896 RFNGQ9Y644 331 aa9.49□□□□□ -0.89
VCL-205ENST00000478896 TMEM56-RWDD3S4R434 201 aa9.49□□□□□ -0.89
VCL-205ENST00000478896 A0A1B0GVY2 172 aa9.48□□□□□ -0.89
VCL-205ENST00000478896 ZNF705FA8MVS1 300 aaPredicted RBP9.48□□□□□ -0.89
VCL-205ENST00000478896 ZNF705DP0CH99 300 aaPredicted RBP9.48□□□□□ -0.89
VCL-205ENST00000478896 ZNF705BP0CI00 300 aaPredicted RBP9.48□□□□□ -0.89
VCL-205ENST00000478896 PSMB3P49720 205 aa9.48□□□□□ -0.89
VCL-205ENST00000478896 CCR6P51684 374 aa9.48□□□□□ -0.89
VCL-205ENST00000478896 DEFB1P60022 68 aa9.48□□□□□ -0.89
VCL-205ENST00000478896 SMCO1Q147U7 214 aa9.48□□□□□ -0.89
VCL-205ENST00000478896 CLVS1Q8IUQ0 354 aaPredicted RBP9.48□□□□□ -0.89
VCL-205ENST00000478896 OR51S1Q8NGJ8 323 aa9.48□□□□□ -0.89
VCL-205ENST00000478896 C7orf50Q9BRJ6 194 aaKnown RBP9.48□□□□□ -0.89
VCL-205ENST00000478896 WDR12Q9GZL7 423 aaKnown RBP9.48□□□□□ -0.89
VCL-205ENST00000478896 RBKSQ9H477 322 aa9.48□□□□□ -0.89
VCL-205ENST00000478896 SCP2D1Q9UJQ7 156 aa9.48□□□□□ -0.89
VCL-205ENST00000478896 PCLOQ9Y6V0 5065 aa9.47□□□□□ -0.89
VCL-205ENST00000478896 IGLV2-18A0A075B6J9 118 aa9.47□□□□□ -0.89
VCL-205ENST00000478896 RTL8CO15255 209 aa9.47□□□□□ -0.89
VCL-205ENST00000478896 FABP1P07148 127 aa9.47□□□□□ -0.89
VCL-205ENST00000478896 MED14OSP0DP75 135 aa9.47□□□□□ -0.89
VCL-205ENST00000478896 HTN3P15516 51 aa9.47□□□□□ -0.89
VCL-205ENST00000478896 SUPT4H1P63272 117 aaKnown RBP9.47□□□□□ -0.89
VCL-205ENST00000478896 ZNF90Q03938 601 aa9.47□□□□□ -0.89
VCL-205ENST00000478896 FAM222AQ5U5X8 452 aa9.47□□□□□ -0.89
VCL-205ENST00000478896 EBLN2Q6P2I7 272 aa9.47□□□□□ -0.89
VCL-205ENST00000478896 OR1S1Q8NH92 325 aa9.47□□□□□ -0.89
VCL-205ENST00000478896 DIRAS2Q96HU8 199 aa9.47□□□□□ -0.89
VCL-205ENST00000478896 SCGB3A2Q96PL1 93 aa9.47□□□□□ -0.89
VCL-205ENST00000478896 NIPSNAP3BQ9BS92 247 aa9.47□□□□□ -0.89
VCL-205ENST00000478896 MCUBQ9NWR8 336 aa9.47□□□□□ -0.89
VCL-205ENST00000478896 HSPB7Q9UBY9 170 aa9.47□□□□□ -0.89
VCL-205ENST00000478896 GOLT1BQ9Y3E0 138 aa9.47□□□□□ -0.89
VCL-205ENST00000478896 KIAA1109Q2LD37 5005 aa9.47□□□□□ -0.89
VCL-205ENST00000478896 A0A0B4J2A0 478 aa9.46□□□□□ -0.9
VCL-205ENST00000478896 CTDSP2O14595 271 aa9.46□□□□□ -0.9
VCL-205ENST00000478896 HBE1P02100 147 aa9.46□□□□□ -0.9
VCL-205ENST00000478896 SMIM18P0DKX4 95 aa9.46□□□□□ -0.9
VCL-205ENST00000478896 ANXA3P12429 323 aa9.46□□□□□ -0.9
VCL-205ENST00000478896 AKR1C4P17516 323 aa9.46□□□□□ -0.9
VCL-205ENST00000478896 OR2F1Q13607 317 aa9.46□□□□□ -0.9
VCL-205ENST00000478896 LGALS9BQ3B8N2 356 aa9.46□□□□□ -0.9
VCL-205ENST00000478896 OR8I2Q8N0Y5 310 aa9.46□□□□□ -0.9
VCL-205ENST00000478896 ZNF709Q8N972 641 aa9.46□□□□□ -0.9
VCL-205ENST00000478896 SLC35B3Q9H1N7 401 aa9.46□□□□□ -0.9
VCL-205ENST00000478896 DKK2Q9UBU2 259 aa9.46□□□□□ -0.9
VCL-205ENST00000478896 SHPKQ9UHJ6 478 aa9.46□□□□□ -0.9
VCL-205ENST00000478896 PAIP2BQ9ULR5 123 aaKnown RBP9.46□□□□□ -0.9
VCL-205ENST00000478896 SNRPGP15A8MWD9 76 aa9.45□□□□□ -0.9
VCL-205ENST00000478896 CTDSPLO15194 276 aa9.45□□□□□ -0.9
VCL-205ENST00000478896 RAB11AP62491 216 aa9.45□□□□□ -0.9
VCL-205ENST00000478896 SRPXP78539 464 aa9.45□□□□□ -0.9
VCL-205ENST00000478896 PSG9Q00887 426 aa9.45□□□□□ -0.9
VCL-205ENST00000478896 GAMTQ14353 236 aa9.45□□□□□ -0.9
VCL-205ENST00000478896 C1orf194Q5T5A4 169 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms