RNA–Protein interactions for RNA: ENST00000478359.5

TRAF3IP3-213, Transcript of TRAF3 interacting protein 3, humanhuman

TSL 1 (best)

Gene TRAF3IP3, Length 1,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP3-213ENST00000478359 MFAP4P55083 255 aa9.87□□□□□ -0.83
TRAF3IP3-213ENST00000478359 PAX8Q06710 450 aa9.87□□□□□ -0.83
TRAF3IP3-213ENST00000478359 SGMS2Q8NHU3 365 aa9.87□□□□□ -0.83
TRAF3IP3-213ENST00000478359 ELOVL1Q9BW60 279 aa9.87□□□□□ -0.83
TRAF3IP3-213ENST00000478359 OSTCQ9NRP0 149 aa9.87□□□□□ -0.83
TRAF3IP3-213ENST00000478359 NAV3Q8IVL0 2385 aa9.86□□□□□ -0.83
TRAF3IP3-213ENST00000478359 LRBAP50851 2863 aa9.86□□□□□ -0.83
TRAF3IP3-213ENST00000478359 PGPEP1LA6NFU8 196 aa9.86□□□□□ -0.83
TRAF3IP3-213ENST00000478359 VWC2LB2RUY7 222 aa9.86□□□□□ -0.83
TRAF3IP3-213ENST00000478359 GNG7O60262 68 aa9.86□□□□□ -0.83
TRAF3IP3-213ENST00000478359 NBEAP1P0C6P0 100 aa9.86□□□□□ -0.83
TRAF3IP3-213ENST00000478359 TRGC1P0CF51 173 aa9.86□□□□□ -0.83
TRAF3IP3-213ENST00000478359 SMIM6P0DI80 62 aa9.86□□□□□ -0.83
TRAF3IP3-213ENST00000478359 PYYP10082 97 aa9.86□□□□□ -0.83
TRAF3IP3-213ENST00000478359 CDX1P47902 265 aaPredicted RBP9.86□□□□□ -0.83
TRAF3IP3-213ENST00000478359 ERVFC1-1P60608 527 aa9.86□□□□□ -0.83
TRAF3IP3-213ENST00000478359 C19orf35Q6ZS72 473 aa9.86□□□□□ -0.83
TRAF3IP3-213ENST00000478359 ZNF329Q86UD4 541 aa9.86□□□□□ -0.83
TRAF3IP3-213ENST00000478359 Q8N9W7 124 aa9.86□□□□□ -0.83
TRAF3IP3-213ENST00000478359 TXN2Q99757 166 aa9.86□□□□□ -0.83
TRAF3IP3-213ENST00000478359 IL36BQ9NZH7 164 aa9.86□□□□□ -0.83
TRAF3IP3-213ENST00000478359 MRPL27Q9P0M9 148 aaKnown RBP9.86□□□□□ -0.83
TRAF3IP3-213ENST00000478359 IGHV3-21A0A0B4J1V1 117 aa9.85□□□□□ -0.83
TRAF3IP3-213ENST00000478359 ISLRO14498 428 aa9.85□□□□□ -0.83
TRAF3IP3-213ENST00000478359 GCGP01275 180 aa9.85□□□□□ -0.83
TRAF3IP3-213ENST00000478359 IGKV1-17P01599 117 aa9.85□□□□□ -0.83
TRAF3IP3-213ENST00000478359 GP9P14770 177 aa9.85□□□□□ -0.83
TRAF3IP3-213ENST00000478359 FCGR2BP31994 310 aaPredicted RBP9.85□□□□□ -0.83
TRAF3IP3-213ENST00000478359 MYCNOSP40205 109 aa9.85□□□□□ -0.83
TRAF3IP3-213ENST00000478359 LYZP61626 148 aa9.85□□□□□ -0.83
TRAF3IP3-213ENST00000478359 FAM103A1Q9BTL3 118 aaKnown RBP9.85□□□□□ -0.83
TRAF3IP3-213ENST00000478359 CHRDL1Q9BU40 450 aa9.85□□□□□ -0.83
TRAF3IP3-213ENST00000478359 SLC25A39Q9BZJ4 359 aaPredicted RBP9.85□□□□□ -0.83
TRAF3IP3-213ENST00000478359 PITPNC1Q9UKF7 332 aa9.85□□□□□ -0.83
TRAF3IP3-213ENST00000478359 SPTBN1Q01082 2364 aaKnown RBP9.85□□□□□ -0.83
TRAF3IP3-213ENST00000478359 K7EN84 100 aa9.85□□□□□ -0.83
TRAF3IP3-213ENST00000478359 PEX7O00628 323 aa9.85□□□□□ -0.83
TRAF3IP3-213ENST00000478359 ATP5J2P56134 94 aa9.85□□□□□ -0.83
TRAF3IP3-213ENST00000478359 NDUFA6P56556 154 aa9.85□□□□□ -0.83
TRAF3IP3-213ENST00000478359 RPEL1Q2QD12 228 aa9.85□□□□□ -0.83
TRAF3IP3-213ENST00000478359 KLK9Q2XQG4 91 aa9.85□□□□□ -0.83
TRAF3IP3-213ENST00000478359 COX19Q49B96 90 aa9.85□□□□□ -0.83
TRAF3IP3-213ENST00000478359 RUSC1-AS1Q66K80 236 aa9.85□□□□□ -0.83
TRAF3IP3-213ENST00000478359 BPIFA4PQ86YQ2 179 aa9.85□□□□□ -0.83
TRAF3IP3-213ENST00000478359 C5orf17Q8NAS9 161 aa9.85□□□□□ -0.83
TRAF3IP3-213ENST00000478359 FRZBQ92765 325 aa9.85□□□□□ -0.83
TRAF3IP3-213ENST00000478359 IGF2BP2-AS1Q96M15 143 aa9.85□□□□□ -0.83
TRAF3IP3-213ENST00000478359 AURKAIP1Q9NWT8 199 aaPredicted RBP9.85□□□□□ -0.83
TRAF3IP3-213ENST00000478359 KLK9Q9UKQ9 250 aa9.85□□□□□ -0.83
TRAF3IP3-213ENST00000478359 ARHGAP32A7KAX9 2087 aa9.84□□□□□ -0.83
TRAF3IP3-213ENST00000478359 IGHV7-81A0A0B4J1V7 117 aa9.84□□□□□ -0.83
TRAF3IP3-213ENST00000478359 A0A0U1RQK1 487 aa9.84□□□□□ -0.83
TRAF3IP3-213ENST00000478359 CENPVL3A0A0U1RRI6 287 aa9.84□□□□□ -0.83
TRAF3IP3-213ENST00000478359 ZNF320A2RRD8 509 aa9.84□□□□□ -0.83
TRAF3IP3-213ENST00000478359 PHOX2AO14813 284 aa9.84□□□□□ -0.83
TRAF3IP3-213ENST00000478359 HIST1H1EP10412 219 aaKnown RBP9.84□□□□□ -0.83
TRAF3IP3-213ENST00000478359 PAX1P15863 534 aa9.84□□□□□ -0.83
TRAF3IP3-213ENST00000478359 MEOX2P50222 304 aa9.84□□□□□ -0.83
TRAF3IP3-213ENST00000478359 UBE2G1P62253 170 aa9.84□□□□□ -0.83
TRAF3IP3-213ENST00000478359 ASPHD1Q5U4P2 390 aa9.84□□□□□ -0.83
TRAF3IP3-213ENST00000478359 VN1R17PQ8TDU5 208 aa9.84□□□□□ -0.83
TRAF3IP3-213ENST00000478359 RNF125Q96EQ8 232 aa9.84□□□□□ -0.83
TRAF3IP3-213ENST00000478359 AJUBAQ96IF1 538 aa9.84□□□□□ -0.83
TRAF3IP3-213ENST00000478359 FANCD2OSQ96PS1 177 aa9.84□□□□□ -0.83
TRAF3IP3-213ENST00000478359 GAR1Q9NY12 217 aaKnown RBP9.84□□□□□ -0.83
TRAF3IP3-213ENST00000478359 C21orf62Q9NYP8 219 aa9.84□□□□□ -0.83
TRAF3IP3-213ENST00000478359 EPDR1Q9UM22 224 aa9.84□□□□□ -0.83
TRAF3IP3-213ENST00000478359 ZNF98A6NK75 572 aa9.83□□□□□ -0.84
TRAF3IP3-213ENST00000478359 PLXNB1O43157 2135 aa9.83□□□□□ -0.84
TRAF3IP3-213ENST00000478359 RANP62826 216 aaKnown RBP9.83□□□□□ -0.84
TRAF3IP3-213ENST00000478359 TMEM183BQ1AE95 376 aa9.83□□□□□ -0.84
TRAF3IP3-213ENST00000478359 ACTL10Q5JWF8 245 aa9.83□□□□□ -0.84
TRAF3IP3-213ENST00000478359 FAM231DQ6ZW35 169 aa9.83□□□□□ -0.84
TRAF3IP3-213ENST00000478359 LYPD1Q8N2G4 141 aa9.83□□□□□ -0.84
TRAF3IP3-213ENST00000478359 FAM110DQ8TAY7 271 aaPredicted RBP9.83□□□□□ -0.84
TRAF3IP3-213ENST00000478359 SHANK2-AS3Q9BTD1 123 aa9.83□□□□□ -0.84
TRAF3IP3-213ENST00000478359 WI2-2373I1.2A0A1W2PRP0 233 aa9.83□□□□□ -0.84
TRAF3IP3-213ENST00000478359 SLC25A5P05141 298 aaKnown RBP9.83□□□□□ -0.84
TRAF3IP3-213ENST00000478359 S100A2P29034 98 aa9.83□□□□□ -0.84
TRAF3IP3-213ENST00000478359 IBA57Q5T440 356 aaKnown RBP9.83□□□□□ -0.84
TRAF3IP3-213ENST00000478359 ZNF600Q6ZNG1 722 aa9.83□□□□□ -0.84
TRAF3IP3-213ENST00000478359 ZNF491Q8N8L2 437 aa9.83□□□□□ -0.84
TRAF3IP3-213ENST00000478359 OR4F17Q8NGA8 305 aa9.83□□□□□ -0.84
TRAF3IP3-213ENST00000478359 FMC1Q96HJ9 113 aa9.83□□□□□ -0.84
TRAF3IP3-213ENST00000478359 C12orf57Q99622 126 aa9.83□□□□□ -0.84
TRAF3IP3-213ENST00000478359 ATG101Q9BSB4 218 aa9.83□□□□□ -0.84
TRAF3IP3-213ENST00000478359 KLF12Q9Y4X4 402 aa9.83□□□□□ -0.84
TRAF3IP3-213ENST00000478359 TRBV9A0A0B4J1U6 114 aa9.82□□□□□ -0.84
TRAF3IP3-213ENST00000478359 IGHV1-69DA0A0B4J2H0 117 aa9.82□□□□□ -0.84
TRAF3IP3-213ENST00000478359 PGPA6NDG6 321 aa9.82□□□□□ -0.84
TRAF3IP3-213ENST00000478359 H3BRN7 92 aa9.82□□□□□ -0.84
TRAF3IP3-213ENST00000478359 IGHV1-69P01742 117 aa9.82□□□□□ -0.84
TRAF3IP3-213ENST00000478359 HNF1AP20823 631 aa9.82□□□□□ -0.84
TRAF3IP3-213ENST00000478359 GATA3P23771 443 aa9.82□□□□□ -0.84
TRAF3IP3-213ENST00000478359 NDPQ00604 133 aa9.82□□□□□ -0.84
TRAF3IP3-213ENST00000478359 BAGE2Q86Y30 109 aa9.82□□□□□ -0.84
TRAF3IP3-213ENST00000478359 BLNKQ8WV28 456 aa9.82□□□□□ -0.84
TRAF3IP3-213ENST00000478359 BBC3Q96PG8 261 aaPredicted RBP9.82□□□□□ -0.84
TRAF3IP3-213ENST00000478359 GSX1Q9H4S2 264 aaPredicted RBP9.82□□□□□ -0.84
TRAF3IP3-213ENST00000478359 OTORQ9NRC9 128 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms